G36887 (LOC101487045)


Basic Information

Item Value
gene id G36887
gene name LOC101487045
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 8610361 ~ 8611088 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU49447
TGGTATTATTTACATTTAACTTCACAAAAATCTAAGAATTAGCTCAAAAATATATTCCACCTGAAGTTGAACAGCTGCATCTGAACCCTCAAAGATTCTGCGGGCCACtcccttgttttgtttgctcatCCCATCCAGGAAGGAATAATCCACATCATTTCCAAATCCAAGACAGAACAGAGACATGTTTCCTCCAATAGCAGAATGAATGTTCTCCTGAATCTTAGGGAGGTGACTCTCTCCACTATTTGGCATTCCATCAGTCAGTAAAATAATCATATCGACGCTCCTCTCTGGGAGCTTCTTCTCTTGCCTGTCTTTGACCAGCATGTTGACACCTTCCAACACTGCATCATTGATATTGGTTActCCCCGTGTTTAATCATTCTGACATAGTCCATTCCTGCAGCCACATTTTCCTTGGTTGCTTTGGCAAGTGATGTTCTCCAAGATTGAATTCTGCTATCAAACTGGATAAGGGCAAAGTAGTCTTCCTCACTGAGGTCTTTTAGGATGGCCAGCAATGCCTCTCGTGTCT

Function

NR:

description
inter-alpha-trypsin inhibitor heavy chain H3 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU49447 True 538 lncRNA 0.42 3 8610361 8611088

Neighbor

gene id symbol gene type direction distance location
gata2a LOC103359878,LOC102204047,LOC100705840,LOC101487525,LOC102779036 coding upstream 113702 8483190 ~ 8496659 (+)
rpn1 rpn1,LOC107091506 coding upstream 136339 8466600 ~ 8474022 (+)
hmces hmces coding upstream 157045 8450701 ~ 8453316 (+)
si:dkey-202e22.2 LOC104952071,LOC103375511 coding upstream 275507 8329315 ~ 8334854 (+)
arpc4l arpc4,LOC103358720 coding upstream 373712 8233082 ~ 8236649 (+)
trnae-cuc_4 NA coding downstream 5910 8616998 ~ 8617069 (+)
trnae-cuc_5 NA coding downstream 30942 8642030 ~ 8642101 (+)
trnae-cuc_6 NA coding downstream 99921 8711009 ~ 8711080 (+)
trnae-cuc_7 NA coding downstream 127879 8738967 ~ 8739038 (+)
trnae-cuc_8 NA coding downstream 130618 8741706 ~ 8741777 (+)
G36836 NA non-coding upstream 164770 8445392 ~ 8445591 (+)
G36827 LOC100705312,LOC102203484,LOC101465335,LOC104933013 non-coding upstream 184830 8422173 ~ 8425531 (+)
G36826 LOC100705312 non-coding upstream 190780 8418304 ~ 8419581 (+)
G36820 NA non-coding upstream 202668 8405244 ~ 8407693 (+)
G36754 NA non-coding upstream 365915 8239463 ~ 8244446 (+)
G36890 NA non-coding downstream 1208 8612296 ~ 8612987 (+)
G36900 NA non-coding downstream 13633 8624721 ~ 8660277 (+)
LOC120558080 NA non-coding downstream 274685 8885773 ~ 8940038 (+)
G36988 NA non-coding downstream 428375 9039463 ~ 9039769 (+)
G36991 NA non-coding downstream 618992 9230080 ~ 9230363 (+)
G36744 NA other upstream 381641 8227762 ~ 8228720 (+)
hcfc1a hcfc1,LOC102799381,LOC102206223 other upstream 1304018 7288907 ~ 7306343 (+)
G36458 LOC100304472,LOC107385856 other upstream 1337993 7209996 ~ 7272368 (+)
si:dkey-245f22.3 NA other upstream 1423147 7183199 ~ 7187214 (+)
setmar LOC100698471 other upstream 1971838 6635280 ~ 6638523 (+)
prickle2b prickle2 other downstream 1149145 9760233 ~ 9856656 (+)
G37197 NA other downstream 1694099 10305187 ~ 10309996 (+)
glrx glrx other downstream 1776820 10387908 ~ 10396187 (+)
G37397 LOC102299939,LOC103353648,LOC103366902,LOC102208776,LOC100700987,LOC104921056 other downstream 2386142 10997230 ~ 11012909 (+)
G37525 evc2 other downstream 2740990 11352078 ~ 11352387 (+)

Expression


Co-expression Network