G36890


Basic Information

Item Value
gene id G36890
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 8612296 ~ 8612987 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU49452
CCTTGTTGCCTGTGACACGTTTCTCCACCAGGGGGAGCAGCTCATTGGAGAAGAAGGTTGCGTTGGCATCCACATAAGAAATGCCCTGAGGCTCATAGATGTTTGTCACACTGAAACTCCTGGACAGGTTGCTTGGGTTTAACTCGAGTCAGAATCTCATACTGGCCCAGTTTCCTCTGAAGGAGCTCCTCGTAGGTCATAATAAATGTCACATTACTTTCAGCTGCGATGTTGACAGACACTGAAAACTTCTCCATTTTTCTTCCAGAAGCCTTGACCAGTCCAGCAGTCTGTCCTGAGGAAACAGCCTTCTCATACTGTTTCTtggctttctctttctccttcacCTCCCCA

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko04979 Cholesterol metabolism
ko05133 Pertussis
ko05150 Staphylococcus aureus infection
ko05322 Systemic lupus erythematosus
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU49452 True 354 lncRNA 0.48 3 8612296 8612987

Neighbor

gene id symbol gene type direction distance location
gata2a LOC103359878,LOC102204047,LOC100705840,LOC101487525,LOC102779036 coding upstream 115637 8483190 ~ 8496659 (+)
rpn1 rpn1,LOC107091506 coding upstream 138274 8466600 ~ 8474022 (+)
hmces hmces coding upstream 158980 8450701 ~ 8453316 (+)
si:dkey-202e22.2 LOC104952071,LOC103375511 coding upstream 277442 8329315 ~ 8334854 (+)
arpc4l arpc4,LOC103358720 coding upstream 375647 8233082 ~ 8236649 (+)
trnae-cuc_4 NA coding downstream 4011 8616998 ~ 8617069 (+)
trnae-cuc_5 NA coding downstream 29043 8642030 ~ 8642101 (+)
trnae-cuc_6 NA coding downstream 98022 8711009 ~ 8711080 (+)
trnae-cuc_7 NA coding downstream 125980 8738967 ~ 8739038 (+)
trnae-cuc_8 NA coding downstream 128719 8741706 ~ 8741777 (+)
G36887 LOC101487045 non-coding upstream 1208 8610361 ~ 8611088 (+)
G36836 NA non-coding upstream 166705 8445392 ~ 8445591 (+)
G36827 LOC100705312,LOC102203484,LOC101465335,LOC104933013 non-coding upstream 186765 8422173 ~ 8425531 (+)
G36826 LOC100705312 non-coding upstream 192715 8418304 ~ 8419581 (+)
G36820 NA non-coding upstream 204603 8405244 ~ 8407693 (+)
G36900 NA non-coding downstream 11734 8624721 ~ 8660277 (+)
LOC120558080 NA non-coding downstream 272786 8885773 ~ 8940038 (+)
G36988 NA non-coding downstream 426476 9039463 ~ 9039769 (+)
G36991 NA non-coding downstream 617093 9230080 ~ 9230363 (+)
G36990 NA non-coding downstream 617477 9230464 ~ 9230954 (+)
G36744 NA other upstream 383576 8227762 ~ 8228720 (+)
hcfc1a hcfc1,LOC102799381,LOC102206223 other upstream 1305953 7288907 ~ 7306343 (+)
G36458 LOC100304472,LOC107385856 other upstream 1339928 7209996 ~ 7272368 (+)
si:dkey-245f22.3 NA other upstream 1425082 7183199 ~ 7187214 (+)
setmar LOC100698471 other upstream 1973773 6635280 ~ 6638523 (+)
prickle2b prickle2 other downstream 1147246 9760233 ~ 9856656 (+)
G37197 NA other downstream 1692200 10305187 ~ 10309996 (+)
glrx glrx other downstream 1774921 10387908 ~ 10396187 (+)
G37397 LOC102299939,LOC103353648,LOC103366902,LOC102208776,LOC100700987,LOC104921056 other downstream 2384243 10997230 ~ 11012909 (+)
G37525 evc2 other downstream 2739091 11352078 ~ 11352387 (+)

Expression


Co-expression Network