G36827 (LOC100705312,LOC102203484,LOC101465335,LOC104933013)


Basic Information

Item Value
gene id G36827
gene name LOC100705312,LOC102203484,LOC101465335,LOC104933013
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 8422173 ~ 8425531 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU49365
GGTGTCACAAgcacttttattaaaacagacggtcatcaaaataaaatatatattgtttaatttaaaataccctatgttaaataaaaaggccCTATCTCTAAGAAAGCTCCTTCagttgttttcaacaacaacaataatagacTGATTAAGAGAGAGATAAGAAAAGGAgcgtgcgatggactgaagtgTAGGATACAAAAACTTTCTTTGACCATATGGCCGATTGTTACTGTACAGTTACctggtttatcagtgaagtgcctgaactacactgcagactggattctctactcacagagtgacagCTGACTCATTAGGGTTAGGGGAACGAACAGGTCCGGTGTGGGTTAAATGTGCGGTCACAGGCGTTATATACATCTTGTGTATGTTAATGGTAAGTCACGTGATCGGGATATGATGGGAGTATTTTCGTGGGCTCGGGATGGGAGCGACAATTGATTCCTGTGTCACCCCCTACTAATAacatactgtaactgtagacaaatgACAGCAGTGTGCACTGGCGCTGCTGCAGGAGAGCCGAGGGGGAGTgggtgggggcggggctgcgcgaAGAGTGAGAGAAGAGATGCAAagacaggcacggctttacagaagaaatgggtcatgtaacgcaacattataCCGATATAAACGGTATTGTCTAATCCCATATCTCGTTtgaaaatatatcgatataaggtaaaatatcgatatatcgcccagccctagtgtgtgtgagagtgtgtgtgtgtgtgtgtgtgtgtgtgttattatgcaAATATGAAGTTGCTCTTGCCTGGCATTGCTGGAGGGTCCCAGCACACTTTGTCCTAGAGCAGTGCCCTGGAAGGCTGTGGCATGCAGCAGGTCAAGGCAAACTTCCTGCAGGTTACCCTCGACTTCCTCTAGCTCACGCAGCACCACACCCCTCTGCTGCTCGATCTCAGCCTCGTTCAGCGAGCAGCTCTGCACCACCTCTGACAGCAGCTCCACGGCTTTGGGCAGGTCTTTTGCAAGGGTCTTCATGTAGTATGCAGTGTGCTCTCGGGAGGTGTAGGCACTCAAGTGAGCACCCATTGACTCCACCTGCTGCTCCAGGGCTGTCTGAGGGTGCTTCTTGGTTCCCTTGAAAGCCATGTGCTCCAGGAAGAAGCCTGCTCCGTTGTTTTTCTCACTCTCATAGCGACTGCCAGCACTGATCCACAGTCCAACAGTGCATGTGGCATGTCCAGTCTCCTCAGATGCGACCTTCAAACCATTATCCAGGGTAGTGAGGCGAGTTTCAGGGGCTCCCACCAGGCTCTGGGCATAGCTGACTGAGGCCCGTCCACGCCTCAGAGACAGCAGGATGGGCtgaaggggagaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

Function

NR:

description
PREDICTED: cytochrome b-c1 complex subunit 1, mitochondrial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU49365 True 1439 lncRNA 0.46 4 8422173 8425531

Neighbor

gene id symbol gene type direction distance location
si:dkey-202e22.2 LOC104952071,LOC103375511 coding upstream 87319 8329315 ~ 8334854 (+)
arpc4l arpc4,LOC103358720 coding upstream 185524 8233082 ~ 8236649 (+)
LOC120557172 rbm38,LOC104939027,LOC101475440,LOC103365886,LOC107102025,LOC107384941 coding upstream 209335 8202280 ~ 8212838 (+)
rae1 rae1 coding upstream 221486 8191703 ~ 8200687 (+)
LOC120556871 NA coding upstream 245125 8170682 ~ 8177048 (+)
hmces hmces coding downstream 25170 8450701 ~ 8453316 (+)
rpn1 rpn1,LOC107091506 coding downstream 41069 8466600 ~ 8474022 (+)
gata2a LOC103359878,LOC102204047,LOC100705840,LOC101487525,LOC102779036 coding downstream 57659 8483190 ~ 8496659 (+)
trnae-cuc_4 NA coding downstream 191467 8616998 ~ 8617069 (+)
trnae-cuc_5 NA coding downstream 216499 8642030 ~ 8642101 (+)
G36826 LOC100705312 non-coding upstream 2592 8418304 ~ 8419581 (+)
G36820 NA non-coding upstream 14480 8405244 ~ 8407693 (+)
G36754 NA non-coding upstream 177727 8239463 ~ 8244446 (+)
G36745 NA non-coding upstream 197401 8224258 ~ 8224772 (+)
G36728 NA non-coding upstream 273944 8147927 ~ 8148229 (+)
G36836 NA non-coding downstream 19861 8445392 ~ 8445591 (+)
G36887 LOC101487045 non-coding downstream 184830 8610361 ~ 8611088 (+)
G36890 NA non-coding downstream 186765 8612296 ~ 8612987 (+)
G36900 NA non-coding downstream 199190 8624721 ~ 8660277 (+)
LOC120558080 NA non-coding downstream 460242 8885773 ~ 8940038 (+)
G36744 NA other upstream 193453 8227762 ~ 8228720 (+)
hcfc1a hcfc1,LOC102799381,LOC102206223 other upstream 1115830 7288907 ~ 7306343 (+)
G36458 LOC100304472,LOC107385856 other upstream 1149805 7209996 ~ 7272368 (+)
si:dkey-245f22.3 NA other upstream 1234959 7183199 ~ 7187214 (+)
setmar LOC100698471 other upstream 1783650 6635280 ~ 6638523 (+)
prickle2b prickle2 other downstream 1334702 9760233 ~ 9856656 (+)
G37197 NA other downstream 1879656 10305187 ~ 10309996 (+)
glrx glrx other downstream 1962377 10387908 ~ 10396187 (+)
G37397 LOC102299939,LOC103353648,LOC103366902,LOC102208776,LOC100700987,LOC104921056 other downstream 2571699 10997230 ~ 11012909 (+)
G37525 evc2 other downstream 2926547 11352078 ~ 11352387 (+)

Expression


Co-expression Network