G42585


Basic Information

Item Value
gene id G42585
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 29750229 ~ 29752056 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU57277
ctccgattgaaaatcaataaaaagtttatataaaacgtcatcatgttgagtcgattctgaaccaatcagctgtttgatcagctgagaggccggcgtttcccagcatgccctgggtccacctgcgtccgcctggctcttgcagttggtgaaaagcaactgcgctacctgcgtctcagaactgcggccgccttggtctcgtgagattatcgttgcccacgtgtgcatgacgtcagagcaagtcgggatcaagtcggacacaaatctaaccggcatgcattgggcgccgatcgccggtgatcgattctgcgcagatctggctcatctcgaacgagcctaattaccagcagagtgagcaggctcatccagtgcctaaggaaggagctgttcctcggagaaaacgtcattaagtctgatgctgaaaagaaaaccacccccttatggcagcgcttcacccagccaacaccaaaacaaagaaatgctgctggttgctactgtgtgtcagcactactattgttaaaatggtcaatttattttattgttctcagctgtttgataaatgctgctaagtgcactaaactttatcttttaattgaaaagtttatttgacaaagttacatttattttctttctttcttcttacccgttttgtttatttatacaatatatgtttttacattatacatgtttaatgtaagtatacaagtgcagattggtgttcaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57277 True 721 lncRNA 0.44 2 29750229 29752056

Neighbor

gene id symbol gene type direction distance location
LOC120557234 NA coding downstream 6265 29741793 ~ 29743964 (-)
wu:fb55g09 NA coding downstream 79749 29668831 ~ 29670480 (-)
rbbp5 rbbp5,LOC102796613 coding downstream 122220 29616239 ~ 29628009 (-)
ippk ippk coding downstream 136109 29600807 ~ 29614120 (-)
ecm2 ecm2 coding downstream 158609 29569515 ~ 29591620 (-)
ccdc71 ccdc71,LOC100694780,LOC102196973 coding upstream 131662 29883718 ~ 29917447 (-)
kctd6a kctd6 coding upstream 176282 29928338 ~ 29968849 (-)
pdhb pdhb,LOC102799652 coding upstream 229113 29981169 ~ 29990493 (-)
pxk NA coding upstream 248882 30000938 ~ 30034930 (-)
rpp14 rpp14,LOC102775666 coding upstream 285185 30037241 ~ 30044628 (-)
G42502 NA non-coding downstream 351505 29398426 ~ 29398724 (-)
G42501 NA non-coding downstream 401401 29299807 ~ 29348828 (-)
LOC120558106 NA non-coding downstream 562729 29184139 ~ 29187500 (-)
G42383 NA non-coding downstream 800902 28944001 ~ 28949327 (-)
LOC120557859 NA non-coding downstream 1106356 28641876 ~ 28643873 (-)
LOC120557237 NA non-coding upstream 46114 29798170 ~ 29802364 (-)
LOC120557236 NA non-coding upstream 78911 29830967 ~ 29834449 (-)
G42643 NA non-coding upstream 125454 29877510 ~ 29877843 (-)
G42689 NA non-coding upstream 245518 29997574 ~ 29997804 (-)
G42691 NA non-coding upstream 250602 30002658 ~ 30005920 (-)
LOC120557442 hes5,LOC104956007 other downstream 999996 28741798 ~ 28750233 (-)
G41944 NA other downstream 2856199 26778299 ~ 26894030 (-)
LOC120557963 grm4,LOC108231655,LOC100700221,LOC102289456,LOC104955002 other downstream 3266688 26324746 ~ 26483541 (-)
tspan2a tspan2 other downstream 4010123 25723968 ~ 25740106 (-)
ncoa5 NA other downstream 4392295 25310745 ~ 25357934 (-)
LOC120556842 rpp14,LOC102775666,LOC101465350,LOC103374991 other upstream 284326 30036382 ~ 30037321 (-)
romo1 romo1,LOC102788570 other upstream 373695 30125751 ~ 30130317 (-)
LOC120558045 NA other upstream 886915 30638971 ~ 30679082 (-)
LOC120557755 grip2,LOC103357845,LOC102782189 other upstream 1194276 30946332 ~ 31015647 (-)
LOC120557401 blcap other upstream 2935964 32688020 ~ 32747110 (-)

Expression


Co-expression Network