LOC120557236


Basic Information

Item Value
gene id LOC120557236
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 29830967 ~ 29834449 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638944.1
TTGCCAGCAAAGAGATTGACGCCTGTCTTAGGGTCACAGGGAGGATGCCTGTGGTGAGGGCTTCTTTAAACGTTGCTTGAAGGGTGAGTGCCAGATGAGAGAAAAACCTTGTATAAAATGTGATTGTAAAACCATCTGGGCCTGGTTATTTGTTATTCTGCATGGATTTAATAGCTGCAACAATTTTGGGAACTGTGATATCAGTGGCCAGCATAGAGTTTTGTTTCTCGGGGACAGTGGGCATTTTTAAACCTTCAAAAAAAGCATGTGAGGGGTCGAGGTCTGTAAAGGGAAGAAACCTTTTGTCTATCCATCTTGGAGCCAACCCCTGCTGGCGTGCAGACTAGATCAGAACGAAAAAACGTTTATTCCTGTAGCTTGAAAATAATTGACACCCACATGGTAGGATCTTGTTTGTTACCGGAAGTAACCTCAAAACACATGGATTTGGAAATAACGCCTTCTTTTGGGGGACGACAGACCAATGGAGAGAGTTTTCATCCAAGGAACCACCTCCAACTTCAAGGGAATGTATTGGTGAAACTTAGAAATGTTTGGCACTGTAAAATGTGAATCGACAAGGCCATCTTTTCAGTCCGCTGCAGCGTAAAACTTATTTTTGTCATGCCATTTTCTTATTAAATCTTTTTGTTAATCTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638944.1 True 661 lncRNA 0.42 2 29830967 29834449

Neighbor

gene id symbol gene type direction distance location
LOC120557234 NA coding downstream 87003 29741793 ~ 29743964 (-)
wu:fb55g09 NA coding downstream 160487 29668831 ~ 29670480 (-)
rbbp5 rbbp5,LOC102796613 coding downstream 202958 29616239 ~ 29628009 (-)
ippk ippk coding downstream 216847 29600807 ~ 29614120 (-)
ecm2 ecm2 coding downstream 239347 29569515 ~ 29591620 (-)
ccdc71 ccdc71,LOC100694780,LOC102196973 coding upstream 49269 29883718 ~ 29917447 (-)
kctd6a kctd6 coding upstream 93889 29928338 ~ 29968849 (-)
pdhb pdhb,LOC102799652 coding upstream 146720 29981169 ~ 29990493 (-)
pxk NA coding upstream 166489 30000938 ~ 30034930 (-)
rpp14 rpp14,LOC102775666 coding upstream 202792 30037241 ~ 30044628 (-)
LOC120557237 NA non-coding downstream 28603 29798170 ~ 29802364 (-)
G42585 NA non-coding downstream 78911 29750229 ~ 29752056 (-)
G42502 NA non-coding downstream 432243 29398426 ~ 29398724 (-)
G42501 NA non-coding downstream 482139 29299807 ~ 29348828 (-)
LOC120558106 NA non-coding downstream 643467 29184139 ~ 29187500 (-)
G42643 NA non-coding upstream 43061 29877510 ~ 29877843 (-)
G42689 NA non-coding upstream 163125 29997574 ~ 29997804 (-)
G42691 NA non-coding upstream 168209 30002658 ~ 30005920 (-)
G42692 NA non-coding upstream 171632 30006081 ~ 30007439 (-)
G42717 LOC102788290,LOC105938248,LOC100694607,LOC103460371,LOC103023575,LOC107097993,LOC101480083 non-coding upstream 214628 30049077 ~ 30098935 (-)
LOC120557442 hes5,LOC104956007 other downstream 1080734 28741798 ~ 28750233 (-)
G41944 NA other downstream 2936937 26778299 ~ 26894030 (-)
LOC120557963 grm4,LOC108231655,LOC100700221,LOC102289456,LOC104955002 other downstream 3347426 26324746 ~ 26483541 (-)
tspan2a tspan2 other downstream 4090861 25723968 ~ 25740106 (-)
ncoa5 NA other downstream 4473033 25310745 ~ 25357934 (-)
LOC120556842 rpp14,LOC102775666,LOC101465350,LOC103374991 other upstream 201933 30036382 ~ 30037321 (-)
romo1 romo1,LOC102788570 other upstream 291302 30125751 ~ 30130317 (-)
LOC120558045 NA other upstream 804522 30638971 ~ 30679082 (-)
LOC120557755 grip2,LOC103357845,LOC102782189 other upstream 1111883 30946332 ~ 31015647 (-)
LOC120557401 blcap other upstream 2853571 32688020 ~ 32747110 (-)

Expression


Co-expression Network