LOC120557506


Basic Information

Item Value
gene id LOC120557506
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 4556761 ~ 4557775 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797900.1
AATCATGAAGAACTTCTTGTCTATAAATGATCAGCTCCATCAGGACCAATTTCTGACTTCCAACAACGGGCAGTTTAAGGCTATCTTTCAGGGAGATGGTAACTTTGTCGTCTATGACTCTGGCAACCGGCCTGTGTGGGCCTCAGGCACTGATGGATCAGGTGCTGTCCACGTGCTCATGCAGGCTGACGGCAACCTGGTCGTTTACAACCAGCATGGCCAAGCCAAGTGGAGCTCAGGGACGTACATCAATAGTCCGTGCGAAATGTGCCGTCTTGAGCTGACCGATGGCGGCAAACTGGAGTTGACCAGAAACTTTCAAAGAGTTTGGAGCTCATGATGAAATTATGTCTTCACATGACCTCACAAAGCTTTGTTAAATTGAATGGTTTGCAAGTAAAAGTCATCTTTGAATGTCAGTGTGAATTACAATAAAACTACCTGCTATGTAATCTGGAATCAAA
>XM_039797902.1
ccaaTCCTGCAATTAGGAGAAGCTACCTAGGGGCAGCGGGCCTACCAGATATAAAGACCTGAATTTCACCTCCTTCACTTCTTCTCACAGACAGACTGGTGTGACATTCAAGACTAATCATGAAGAACTTCTTGTCTATAAATGATCAGCTCCATCAGGACCAATTTCTGACTTCCAACAACGGGCAGTTTAAGGCTATCTTTCAGGGAGATGGTAACTTTGTCGTCTATGACTCTGGCAACCGGCCTGTGTGGGCCTCAGGCACTGATGGATCAGGTGCTGTCCACGTGCTCATGCAGGCTGACGGCAACCTGGTCGTTTACAACCAGCATGGCCAAGCCAAGTGGAGCTCAGGGACGTACATCAATAGTCCGTGCGAAATGTGCCGTCTTGAGCTGACCGATGGCGGCAAACTGGAGTTGACCAGAAACTTTCAAAGAGTTTGGAGCTCATGATGAAATTATGTCTTCACATGACCTCACAAAGCTTTGTTAAATTGAATGGTTTGCAAGTAAAAGTCATCTTTGAATGTCAGTGTGAATTACAATAAAACTACCTGCTATGTAATCTGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797900.1 False 464 mRNA 0.45 2 4557226 4557775
XM_039797902.1 True 574 mRNA 0.46 3 4556761 4557770

Neighbor

gene id symbol gene type direction distance location
LOC120558095 NA coding upstream 17014 4537471 ~ 4539747 (+)
LOC120557769 LOC106958509,LOC107723971,LOC107690788,LOC107671222,LOC107579420 coding upstream 31253 4524321 ~ 4525508 (+)
LOC120558177 LOC100698470,LOC102194894,LOC101473847,LOC102310675,LOC102787480,LOC104957620 coding upstream 32937 4510543 ~ 4523824 (+)
LOC120556766 LOC104935308,LOC104932967 coding upstream 57667 4498585 ~ 4499094 (+)
LOC120556767 NA coding upstream 58924 4496804 ~ 4497837 (+)
LOC120557505 LOC104935308,LOC104932967 coding downstream 800 4558575 ~ 4559468 (+)
LOC120557502 LOC105888650,LOC101068541,LOC107388332,LOC103395674,LOC105896821 coding downstream 12135 4569910 ~ 4571535 (+)
LOC120557508 NA coding downstream 26554 4584329 ~ 4585357 (+)
LOC120558218 NA coding downstream 124103 4681878 ~ 4684344 (+)
txnrd3 LOC103366329,LOC102309132,LOC105934676 coding downstream 150906 4708681 ~ 4729627 (+)
G35834 NA non-coding upstream 186540 4369919 ~ 4370221 (+)
G35833 NA non-coding upstream 187711 4368691 ~ 4369050 (+)
G35739 NA non-coding upstream 726820 3772611 ~ 3829941 (+)
G35741 NA non-coding upstream 764788 3790004 ~ 3791973 (+)
G35737 NA non-coding upstream 788373 3767852 ~ 3768388 (+)
G35925 LOC104957620,LOC100698470,LOC102194894,LOC101473847,LOC102310675,LOC102787480 non-coding downstream 47685 4605460 ~ 4610060 (+)
G35941 NA non-coding downstream 52763 4610538 ~ 4613004 (+)
G35942 NA non-coding downstream 58118 4615893 ~ 4617397 (+)
G35958 NA non-coding downstream 133280 4691055 ~ 4694565 (+)
G36022 NA non-coding downstream 242196 4799971 ~ 4800984 (+)
LOC120557928 NA other upstream 23899 4529833 ~ 4532862 (+)
G35791 LOC101072424,LOC104921976 other upstream 606633 3948834 ~ 3950128 (+)
epha8 epha8,LOC102791453 other upstream 967149 3453600 ~ 3589612 (+)
G35618 NA other upstream 1197941 3244231 ~ 3358820 (+)
G35578 NA other upstream 1539636 2930924 ~ 3017125 (+)
cdk5rap1 cdk5rap1 other downstream 353924 4911699 ~ 4934164 (+)
G36156 LOC103374102 other downstream 1363149 5920924 ~ 5924400 (+)
rybpb rybp other downstream 1477297 6035072 ~ 6055216 (+)
prok2 prok2,LOC103355444 other downstream 1546838 6104613 ~ 6107152 (+)
foxp1b foxp1 other downstream 1581688 6139463 ~ 6306143 (+)

Expression


Co-expression Network