LOC120558095


Basic Information

Item Value
gene id LOC120558095
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 4537471 ~ 4539747 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798959.1
GGAGGAAAAGGAGGCATTCTCGGCTGAGTTTGCTAGGCTCCCTATCCCTGTATGCTTCACGTGTGCCCGAAATGGCATCTCAAAGCTCAGTCCCCTACGCTATCAATTTTGGCAAGCACTGGGCAAGACTGAAATTCACTGGTGATGGCTCTGCGCCAGACAGAGATTACGTTGCTGAACAGTTATTATTCCAGTCCTCCTGGGTGAGTCCCACAGACATTTACTCATTCATAGCACTGCCCAACAGGAAAGACTTTGAGTTGGTCTTCTACAATGAAGCACCCCTTCGACGCTTCCTTGAAGTTGCCTCCGCCAAGTCAAACGATGTAAAATGGCGTGACTGGAGTATTGAGTCTTCTGTGGCTGTAGATGTCATGACAATCGTCGTAAAGTTCTGGACGGGCAGAGTCTCCGATCATGACATTGAGCTCTATCTAAAACGGTATTGCGACATCATTCAGTCAGTTTATAAGCCTCTCGACAAATTCGGCATATGGTACGGAGTTCGCAAATATAGAATCCGCATGCATGTCAACACCTCTGGTCAACTTGTTGATTTGCCAAATTCTATATCCCTGGGTCCATACAATGGCCGAATTATATACACTGGTCAGGTTACTAAGTGCTTTATTTGTCAAGCAACTGACCATCAAGTGAAAGATTGCCCTACTATGAAGTGCTGGCGATGTGGAAGCCTGGGCCACAAAGCCTCCACCTGCCAAAACAACAGTACATGCTCTCTGTGTGGTGAGAAGGGACATACTTTCTTCAAGTGTCCTAAATCCTTCGTCAATAAAATCAAGGGCCTCTCTCAGCTGGGAAACACCGCCGCTCCTCCCCTCCGCAGTGACTCCCAGCAACAGCCTGGAACACAGCAAAGGCAGCCCGCAGACCAGCAGCCCGAAGGGTCGCAACAACAACCAGCGCCCCAGCAGCCTGGAGGATCGCTCCAACAACCAGCGCCCCAACAGCTTGGAGGAATGCAGCGAGAGACAACTACCCAGCAGCCTGGAGGACCGTCACAACAACCAGCGCCCCAGCAGCCTGGAGGATCGCTCCAACAACCAGCGCCCCAACAGCTTGGAGGAATGCAGCGAGAGACAACTACCCAGCAGCCTGGAGGACCGTCACAACAACCAGCGGCCCAGCAGCCTGGAGGAAAGCAGCGAGAGACAACTACCCAGCAGCCTGGAGGACCGTCACAACAACCAGCGGCCAAGCTGCAGCTGCATCTCACTCAACCCACCTTGCAGACCAGGAACCCCCCTCCTGAAGTCTCCCTTCAATCAGGTGAGGAAAAAGATTTGAGTATAAGTGGCATAGAAAGCATGAGTGACGATAGTGATGGCGATGAAAATGAGGAAAACGAACAGAGTTATGAAAGTGCCAGTGAGAGTCCTAGTTCAGATTTTAGCTCTACCGGGCTGACAGCCGGTCAGCGGGCCAGCAGCACCCCCGCTGCTGATAACGCTGACTCCGCTCCATGTGACAGTAACTCGGGCTCGTTCTCTACGACACCAGAGTTTCCTTCTCCAGAGGTTCAGCATGACCCTTCATTtgaggaagttaaaaagagaaaaaaaagaaatcgtaCTATAacatataaagaaaataaacgTGTGGATGTTAAACCTTCACCATAGGCTTAGTCTCTCCCCAACAACATCATGTCCTGTTTAAAAATATCCACCTGGAACGCCCGTGGCATCCAGTCTAAAGCTTTTAGATCTACGAAATTGAAATATCTTTTAGACACAGATTTTGATATTCTGTGTGCTCAAGAGCTCAGACTGAATACCCGTAATGACGTCActgatgtgtgtaatatgtggaACAAAGGACTGAGTATAATATCTATTGGGGAAAGCAGAGCCGATGGTGttggtatattttttaaaaccaatgatGTTGTTATAATTCGAAGAAGAGATTTAATCCCAGGTAGACTTCTTATGATTGACTGTTATTATAGGGGTGAAAAATACCGTGTTATTAATGTGTACACTGCTCCTGATAGAGTCAGAAAAATGCAATTATTTAAAAGACTTAGAGAGCTTTTAACAGTAGGCTATAAAGTTATTGTGTGTGGTGATTTTAATACAGTCACGGATAAAAATGATATAGTTAGTTTCAATGTTTTTAAACTACTAAGGGAAGGTAagcttttaaaagaaatatgtgaTGAAACTAAATTAATAGACGTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798959.1 True 2205 mRNA 0.47 2 4537471 4539747

Neighbor

gene id symbol gene type direction distance location
LOC120557769 LOC106958509,LOC107723971,LOC107690788,LOC107671222,LOC107579420 coding upstream 11963 4524321 ~ 4525508 (+)
LOC120558177 LOC100698470,LOC102194894,LOC101473847,LOC102310675,LOC102787480,LOC104957620 coding upstream 13647 4510543 ~ 4523824 (+)
LOC120556766 LOC104935308,LOC104932967 coding upstream 38377 4498585 ~ 4499094 (+)
LOC120556767 NA coding upstream 39634 4496804 ~ 4497837 (+)
LOC120556803 NA coding upstream 44303 4492593 ~ 4493168 (+)
LOC120557506 NA coding downstream 17014 4556761 ~ 4557775 (+)
LOC120557505 LOC104935308,LOC104932967 coding downstream 18828 4558575 ~ 4559468 (+)
LOC120557502 LOC105888650,LOC101068541,LOC107388332,LOC103395674,LOC105896821 coding downstream 30163 4569910 ~ 4571535 (+)
LOC120557508 NA coding downstream 44582 4584329 ~ 4585357 (+)
LOC120558218 NA coding downstream 142131 4681878 ~ 4684344 (+)
G35834 NA non-coding upstream 167250 4369919 ~ 4370221 (+)
G35833 NA non-coding upstream 168421 4368691 ~ 4369050 (+)
G35739 NA non-coding upstream 707530 3772611 ~ 3829941 (+)
G35741 NA non-coding upstream 745498 3790004 ~ 3791973 (+)
G35737 NA non-coding upstream 769083 3767852 ~ 3768388 (+)
G35925 LOC104957620,LOC100698470,LOC102194894,LOC101473847,LOC102310675,LOC102787480 non-coding downstream 65713 4605460 ~ 4610060 (+)
G35941 NA non-coding downstream 70791 4610538 ~ 4613004 (+)
G35942 NA non-coding downstream 76146 4615893 ~ 4617397 (+)
G35958 NA non-coding downstream 151308 4691055 ~ 4694565 (+)
G36022 NA non-coding downstream 260224 4799971 ~ 4800984 (+)
LOC120557928 NA other upstream 4609 4529833 ~ 4532862 (+)
G35791 LOC101072424,LOC104921976 other upstream 587343 3948834 ~ 3950128 (+)
epha8 epha8,LOC102791453 other upstream 947859 3453600 ~ 3589612 (+)
G35618 NA other upstream 1178651 3244231 ~ 3358820 (+)
G35578 NA other upstream 1520346 2930924 ~ 3017125 (+)
cdk5rap1 cdk5rap1 other downstream 371952 4911699 ~ 4934164 (+)
G36156 LOC103374102 other downstream 1381177 5920924 ~ 5924400 (+)
rybpb rybp other downstream 1495325 6035072 ~ 6055216 (+)
prok2 prok2,LOC103355444 other downstream 1564866 6104613 ~ 6107152 (+)
foxp1b foxp1 other downstream 1599716 6139463 ~ 6306143 (+)

Expression


Co-expression Network