thoc7 (thoc7)


Basic Information

Item Value
gene id thoc7
gene name thoc7
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 9921081 ~ 9926482 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798609.1
GCTCTCCTCTGTGGCCAATCATCGCCGTCTGCTTTGTTCACTTCCTGCTGTTCAATAAAGTTTATCTAGCTCGACACAGACATGGGTGCTGTTACAGATgATGAAGTTATTCGGAAACGTCTTCTTATTGACGGGGACGGAGCTGGAGATGATCGCCGAATCAATGTGCTGCTTAAGAGTTTCACCAAATGGTGCAACTCGACTGGGACCCCAGAGGAAGGGTTCACACAGTATCAAAGGATGATGGGCACACTGGCCCAGTGTGAATTCTCCATGGGGAAGACGTTGATGGTTTATGACATGAATCTGCGTGAAATGGAAAATTATGAGAAAATCTACACTAACATAGAACAAAACATCACGTCTGCTCACGAGAAGATAGCAGAATGCAAAAAAGAAATTCAGCGAGCAAAGAGAATACGGAAGAATCGGCAAGaGTACGATGCTTTAGCTAAGGTTATCCAGCAGCACCCAGACCGCCACGAAACACTAAAGCAGTTGGAGGCGCTTGACAAAGAACTCCAGTTACTGTCTCGCACCAAGGAGAACGTAGATGCAAAGTTGGAATTAAGAAAGAAGCAGTTCCATGTGCTACTCAGCACCATACAGGAACTACAGCAGACACTCGAGAATGACGAGAAATCTGACAATGACGACATCAATCAAGAGAGCCCTGCAGAGAATGGGGAATGAATTTGAAGACCTCCGGACTGAAATAAATAGAAGTGAACCGCTTTtaaatgattttgtttttgcttaaaaatactttttgtatACATGTATTTTTGAATAAATTTGACTTGTGCACAAAttcaaa

Function

symbol description
thoc7 Predicted to enable RNA binding activity. Predicted to be involved in mRNA export from nucleus. Predicted to act upstream of or within RNA splicing; mRNA processing; and mRNA transport. Predicted to be located in cytoplasm and nucleus. Predicted to be part of THO complex part of transcription export complex. Orthologous to human THOC7 (THO complex 7).

NR:

description
THO complex subunit 7 homolog

GO:

id name namespace
GO:0006397 mRNA processing biological_process
GO:0000445 THO complex part of transcription export complex cellular_component

KEGG:

id description
K13176 THOC7; THO complex subunit 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798609.1 True 817 mRNA 0.43 8 9921081 9926482

Neighbor

gene id symbol gene type direction distance location
psmd6 psmd6 coding upstream 34956 9880028 ~ 9886125 (+)
adamts9 adamts9 coding upstream 166583 9703011 ~ 9754498 (+)
magi1b magi1 coding upstream 270744 9495284 ~ 9650337 (+)
lrig1 lrig1 coding upstream 522478 9360191 ~ 9398603 (+)
suclg2 suclg2 coding upstream 691100 9104336 ~ 9229981 (+)
lyar lyar coding downstream 87364 10013846 ~ 10016764 (+)
tmem128 tmem128 coding downstream 90425 10016907 ~ 10029487 (+)
otop1 otop1 coding downstream 103104 10029586 ~ 10038874 (+)
drd5a drd5 coding downstream 113818 10040300 ~ 10044549 (+)
idh3b idh3b coding downstream 293244 10219726 ~ 10230679 (+)
G37064 NA non-coding upstream 187730 9731857 ~ 9733351 (+)
G37023 NA non-coding upstream 510420 9359504 ~ 9410661 (+)
G36990 NA non-coding upstream 690127 9230464 ~ 9230954 (+)
G36991 NA non-coding upstream 690718 9230080 ~ 9230363 (+)
G36988 NA non-coding upstream 881312 9039463 ~ 9039769 (+)
G37104 NA non-coding downstream 1553 9928035 ~ 10006856 (+)
G37112 NA non-coding downstream 31353 9957835 ~ 9962577 (+)
G37163 NA non-coding downstream 125646 10052128 ~ 10052337 (+)
G37177 NA non-coding downstream 278307 10204789 ~ 10206757 (+)
G37186 NA non-coding downstream 330768 10257250 ~ 10260329 (+)
prickle2b prickle2 other upstream 64425 9760233 ~ 9856656 (+)
G36744 NA other upstream 1692361 8227762 ~ 8228720 (+)
hcfc1a hcfc1,LOC102799381,LOC102206223 other upstream 2614738 7288907 ~ 7306343 (+)
G36458 LOC100304472,LOC107385856 other upstream 2648713 7209996 ~ 7272368 (+)
si:dkey-245f22.3 NA other upstream 2733867 7183199 ~ 7187214 (+)
G37197 NA other downstream 378705 10305187 ~ 10309996 (+)
glrx glrx other downstream 461426 10387908 ~ 10396187 (+)
G37397 LOC102299939,LOC103353648,LOC103366902,LOC102208776,LOC100700987,LOC104921056 other downstream 1070748 10997230 ~ 11012909 (+)
G37525 evc2 other downstream 1425596 11352078 ~ 11352387 (+)
LOC120557336 LOC103359259,LOC100704408,LOC101476502,LOC102796717,LOC102216118 other downstream 1458702 11385184 ~ 11394398 (+)

Expression


Co-expression Network