LOC120559306 (hes2,LOC103362587)


Basic Information

Item Value
gene id LOC120559306
gene name hes2,LOC103362587
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 25973066 ~ 25974347 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800934.1
TTTTGGACACTTCTCTGGCACAAAGACGAAGCTGAAAATGTCTCCAAACATGACTTGTGAAGCTCTCCAGTCTTTTTCTCCAAGGGTAACTGTGGCCAAAAGAAAAGAGGCTCTTGAGCTCCGAAAGACAATGAAACCTTTGATGGAAAAAAGAAGGCGCGCCCGTATCAATGACAGCCTGAACCATTTGAAAAACCTCATCCTTCCCCTCACAGGCAGAGATaaGACTCACTACTCCAAGCTTGAGAAAGCCGACATCCTGGAAATGACTGTGAGGTTCCTCAGCGACATTCCCCCTGTTTGCACGAAAAATTCCGCAGACAGTTACAAGGAAGGCTACAAAGCCTGCCTCCAGCGCGTCTCCACTCTGCTTCCCAAAACGAGCCTGGACCAAGATGCGTGTCAGCGGGTGAACGAATTCGTCCAGCAGTCCACGTCCACCACCGCCACCATCACCCCAACCTGCCTGAACTGCTGCGCTCAGAGCTCCAGGACTCTCCCTCAGATCCAACAGAGACTCCTGAGCCTCAAATCCAGCTTCAGCTCCAGACTGGAGAGCCAGTCCCGCAGCAGCGGCGGCGTCGCAGTGGCTCCCAGCCGAGCGCAGTCCGGCCCGCAGGCTGTCGGCGCTGCCATGTGGAGACCTtggtagatttaaaaaaaagcagcctGCTCCTCCAAAAACCTGTGAAAAGACTGTAAAGTGTTTTATATGTAGGCAGCATGTTGAGATAGCATCACTTGTACAGTATGCAAAGTGATTCACCGCCTCGCTTCCGTTGATGAAAAGCCAGAATTCATCGTTAAATCGAATTGGTTGAGTATTATATACTTACGTTTTGCGCACGAGTCTGTTGTCCTGTATGAGTTGACAAGTTTAGACAgtcgtatttttttttaaatctgcatGTATGTATACGTTAAATATTTAGTCCTCTTTGCGGACTAAGTGAT

Function

symbol description
hes2 Enables sequence-specific double-stranded DNA binding activity. Predicted to be involved in anterior/posterior pattern specification; regulation of neurogenesis; and regulation of transcription by RNA polymerase II. Predicted to be part of chromatin. Predicted to be active in nucleus.

NR:

description
PREDICTED: transcription factor HES-2-like

GO: NA

KEGG:

id description
K09087 HES2_6_7; hairy and enhancer of split 2/6/7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800934.1 True 954 mRNA 0.49 4 25973066 25974347

Neighbor

gene id symbol gene type direction distance location
LOC120559223 gpr153,LOC102782986 coding downstream 66564 25871458 ~ 25906502 (-)
wrap73 wrap73 coding downstream 204584 25748576 ~ 25768482 (-)
LOC120558853 LOC104939814 coding downstream 234505 25728560 ~ 25738561 (-)
LOC120558818 LOC104944186 coding downstream 534713 25433899 ~ 25438353 (-)
LOC120559015 LOC103353028 coding downstream 539368 25429407 ~ 25433698 (-)
hes2.1 hes2,LOC104926436,LOC103362588 coding upstream 11334 25985681 ~ 25987238 (-)
ybx1 ybx1 coding upstream 97238 26071585 ~ 26076648 (-)
ppih ppih coding upstream 104465 26078812 ~ 26095577 (-)
taf10 taf10 coding upstream 121978 26096325 ~ 26101396 (-)
LOC120559533 NA coding upstream 135220 26109567 ~ 26119334 (-)
LOC120559222 NA non-coding downstream 105544 25832432 ~ 25867522 (-)
G53052 NA non-coding downstream 171889 25799425 ~ 25801177 (-)
G53027 NA non-coding downstream 440013 25530853 ~ 25533053 (-)
G53006 NA non-coding downstream 526491 25443148 ~ 25446575 (-)
G53004 LOC104953341 non-coding downstream 544123 25425344 ~ 25428943 (-)
G53095 espn non-coding upstream 61238 26035585 ~ 26048413 (-)
G53161 NA non-coding upstream 159914 26134261 ~ 26136831 (-)
G53162 NA non-coding upstream 211080 26185427 ~ 26212141 (-)
G53179 NA non-coding upstream 211509 26185856 ~ 26189714 (-)
G53185 NA non-coding upstream 220151 26194498 ~ 26195171 (-)
acot7 acot7,LOC102782704 other downstream 744 25910755 ~ 25972322 (-)
phactr3a LOC100701276,LOC107550338,LOC107551495,LOC104947949,LOC103365918,LOC106955159 other downstream 1188061 24750431 ~ 24785005 (-)
masp2 masp2,LOC106536928,LOC103357864,LOC107086886 other downstream 1633610 24335149 ~ 24339456 (-)
G52501 eno1,LOC104965722,LOC103151087 other downstream 2653382 23308500 ~ 23319684 (-)
si:ch211-150o23.3 LOC103367744,LOC101075068 other downstream 2754166 23214098 ~ 23218900 (-)
emc1 NA other upstream 162651 26136998 ~ 26147245 (-)
G53196 NA other upstream 238646 26212993 ~ 26214882 (-)
LOC120559114 LOC101164642,LOC104966947,LOC100690915,LOC104926428,LOC102195969,LOC101062277 other upstream 417665 26392012 ~ 26402310 (-)
dcp1a dcp1a other upstream 672467 26646814 ~ 26658321 (-)
selenok selenok other upstream 818105 26792452 ~ 26795090 (-)

Expression


Co-expression Network