G53162


Basic Information

Item Value
gene id G53162
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 26185427 ~ 26212141 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU71061
ACAGCTTTATTAATCATATGCTAAATTCAAAAAGCAGACATTCAGCAACAGTTTAACATTGTAGCAGCGGGAATATGCGAATTAACAATAAACTGGGTGTACTTCACACCATGCATTTTGCTTAAGTACATGGACGCCAAAGTAACGGTCTGCATGTTGAAAATCAATCACTGAAGATTAAACTCAGCGGCACTTTGCTTTCCAGGAATCTATTCTGGGGATTGACACAAGAGTGTTGGCCCGAGAAATAAAGAAACTGCTGGGGAAGAAATCAAActgaacaacaaaataaatagtcaaagaaaaaaatgttgaaggaTATAATGTTGGTCTGTTTTATTGTTAATTTAGACATGTCTGATATTTCATTGCAACAAATGGAATCTTTCACAAGTCCAAAGTTCACTTTGTCACAAAGGTATAgctttatggaaaaaaataaaaaactattcGTTCTTTTCCCCATTTTGCTTTTGAGGTTgataaaataaactttaaacatactaaatccaaaaaaaaaattctgtcccTCACTCAATTTCCAGTTCGAACCTACATGAAGACCCAACAGCAAGAGCCCCGGAGAAAAGGACAGGTTAGCAACCATGTGACAGTGAAACCttctgccatttaaaaaaaaaaaaatctgaccaAAAACAAACttcaaccaaacaaacaaaagggaaAAGAAGATAAAATCAAATGCCACTCTTAACACGCGGTGGGTCAAATCCCCAAACATTTTTAGTTGAACTTAACATGGCAGCCCAATAttaggggaggagggagaggggttTGAAAGCCAAAAAAAGTTTCCAACCTAAAACAGAATTCACGAGTTATTCCCATCAACCGAACAACTattggttttttttaacattaaattcTCTCAGCTCGCCATTCTGGCAGTAACACAACCTGTCTCAGCAGAGTCCCAGATCTCTTGTCTCAAGCTTGGCGAGAAACTCAGTCATCAACTCTAGACTGAATCAGAGGGGCAAAGCGTAAATTCTATTTTAGTGCGTTCCCCCCTTTACCgccattgtgtttttgtgttaaaCATTACAGAGATGTTGCCAAAAGTGGATGATTTTTAGACAACAGATAGTTTCTgcttaaagttaatttgaagaGGTCATATGAGGGAGGGAAGTGAGTAAGAGGCATGGTGTATACTCCGTGTGTGTACTCGGCATGGGTCAGTGTGTAAAAAGAGAAAatctggttgttttttttcagttggTAGGTGTCCCAACTTTATttgcagggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtGAATGTTTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71061 True 1315 lncRNA 0.38 2 26185427 26212141

Neighbor

gene id symbol gene type direction distance location
LOC120559533 NA coding downstream 66093 26109567 ~ 26119334 (-)
taf10 taf10 coding downstream 84031 26096325 ~ 26101396 (-)
ppih ppih coding downstream 89850 26078812 ~ 26095577 (-)
ybx1 ybx1 coding downstream 108779 26071585 ~ 26076648 (-)
hes2.1 hes2,LOC104926436,LOC103362588 coding downstream 198189 25985681 ~ 25987238 (-)
LOC120558512 LOC108236765 coding upstream 12988 26225129 ~ 26226447 (-)
LOC120559017 NA coding upstream 16749 26228890 ~ 26232414 (-)
LOC120558305 NA coding upstream 64274 26276415 ~ 26286289 (-)
LOC120559019 LOC102791945 coding upstream 74407 26286548 ~ 26315880 (-)
kif5aa LOC103362778,LOC100691451 coding upstream 113749 26325890 ~ 26348279 (-)
G53161 NA non-coding downstream 48596 26134261 ~ 26136831 (-)
G53095 espn non-coding downstream 137014 26035585 ~ 26048413 (-)
LOC120559222 NA non-coding downstream 317905 25832432 ~ 25867522 (-)
G53052 NA non-coding downstream 384250 25799425 ~ 25801177 (-)
G53027 NA non-coding downstream 652374 25530853 ~ 25533053 (-)
G53240 NA non-coding upstream 152179 26364320 ~ 26364799 (-)
G53324 NA non-coding upstream 188862 26401003 ~ 26580105 (-)
G53335 NA non-coding upstream 230941 26443082 ~ 26444898 (-)
G53346 NA non-coding upstream 292308 26504449 ~ 26537256 (-)
G53349 vapb non-coding upstream 316410 26528551 ~ 26533028 (-)
emc1 NA other downstream 38182 26136998 ~ 26147245 (-)
acot7 acot7,LOC102782704 other downstream 213105 25910755 ~ 25972322 (-)
phactr3a LOC100701276,LOC107550338,LOC107551495,LOC104947949,LOC103365918,LOC106955159 other downstream 1400422 24750431 ~ 24785005 (-)
masp2 masp2,LOC106536928,LOC103357864,LOC107086886 other downstream 1845971 24335149 ~ 24339456 (-)
G52501 eno1,LOC104965722,LOC103151087 other downstream 2865743 23308500 ~ 23319684 (-)
G53196 NA other upstream 852 26212993 ~ 26214882 (-)
LOC120559114 LOC101164642,LOC104966947,LOC100690915,LOC104926428,LOC102195969,LOC101062277 other upstream 179871 26392012 ~ 26402310 (-)
dcp1a dcp1a other upstream 434673 26646814 ~ 26658321 (-)
selenok selenok other upstream 580311 26792452 ~ 26795090 (-)
G53444 sema3g other upstream 749206 26961347 ~ 26966023 (-)

Expression


Co-expression Network