G53444 (sema3g)


Basic Information

Item Value
gene id G53444
gene name sema3g
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 26961347 ~ 26966023 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU71453
GCATGGCAGAAAGACacttaaataaaacataaatatgcATTTAAATTAGGCTCTGTCACAGACCCCACAACCAGCACAGTTTTACAGTACAATAAAGGGACAGGTCACCAAATTAATGTTCATATCTAATCAAAGGATCCTTACAATGTTGAGCCTAAATTCTACATTGAGTGTTGTTCAGTAAGAATTGTTTACTGCAGGGAAACCATGCTGGTTGAATCTTTCAGGTTCGTGATGACTATGTGCTTGAAAGACTGCTGACCTTCCAAATTCACAGGTGCCATAATCCTGAGtagatagataagatagatGTTATGAATGTTTTTACTGCAGCGTCTTCTCTCACAGTCTGAACCTGACTGAACCTCTTTTTCTGCTTAATATAGAGTAGCTGTGGAGGTCAGAGCATGTGCAGCCAGGTATTAATTATTGCACCTCCAATCAGGTGGAGCAACTAATCAGTGAAATCACCTGGTGTAGTTTGACTGGAGCGAAATCCTGTCCCAGTGTTACAAAAGGTATCACAATACATTGTACAtacagtgtttgtgtctttgttaaATGATAAATCCATCCAAGTGTTTTTactaaaatactgtaaaacacaACACTTAAACATTAAGGCAGAATAAGTGCTGTAAATTCAACATGTGTTTGAGATAACATTTTTAAACTATTGACAAACTGCACTGAACTAGCTATAGAGAGTGGACAGAATAGGAGcaagataaaaatataaatgggAGATGCAAAACCACCGCATACTTTGTACAACCGTTCCAACAACTAAAATGCACCTGAAAACTATACAAAGTGTGTGTttaaacatgcacaaaaactgACATTTAATCAGTCAAGCCACATTTTTGTCAGCAACTAAAAATTcaatatttgcaaaaaatgcACAAATTATTATTTCTTATTATTTAGTCTCAAAACACtgtccagcaaaaaaaaaaaaaagaaaaaacgtgtCAGCGTTTATTTTGCCGGTTTCACTATGACAGTTGCCGTAAAATGGAAACTTGTGTTTTTAGAcaattttatactttaagtttACAATAATAGTAACACAGttataccttaaacacagttttTAATTTTCTGATGACAGTAATGCAGGGTCGGGATTTGGACTTACAAAAGCAGAGTgttaccaccaccaccaaaatATGACTTTATCATCTTTATAGACCAGAGCAGACCAGACAATGCAAAAACATGACAAGACTAAAATACAAAAGTGACAATTTGACAAGACTTTCTTTTACCCTGCCAGCTGTCTTTTTGTTTCATGCATACCATCCTCCTGTCACTATATCATTTTCTTTCAGTTTAGATATACATCAGAAGcaatatttttaaagaaaacagtgGTGTCTAATAGTCACTCTCCCTATCCTCAAACTAAGAAAATAAACTTTGCTGGAGTAAAATGTGTGCTTAAGTGTGCTGTACAAACTGGGGGAAATGTGTCACTTTTTGAAATACTCACTTCATACTGATGAAGAAAATTAGTATTAATAGGTATTAGGACTTTTATAAATTTCAAATTCAGCCTTCACAAGATGCTTATAgtaccttatttttttttttttaatctctctctcctgtcttctCCCCATGTTCactcctctttttttatttgtcctcTCAGAAGCTATTCACACGCCATAAAGGTTACATAAAGGTTACCAAGTTCACTGGTGTTAATGTTGTTTCCTGGCTAATTTTAAACGATAGTGCTCCTAGAATATCTATACCATCTTTCATATGTACAGGTTATAGGGATTTCACCCTCCATATTGGAGCTTCTCAGTTCTTTGGCAACAACAGGCTATTTGTGAACAGCTGTTTGCggtgttttaaatgtgtttagcTGTCTTCAAATTACTCCAATAAACATACAACACTTTTTTAACACCGTTTTTAAATTGGAAACTGATGATTTCACCACTTTGTCCACCAACATCTGATTGATCCCAGAACAAATGTAGATAATATCATCTTGGATTTTTTATGTAAACAGTCACCCAGACTTAAGCTTGGCATTCGTTCTCCTCAGCCTGCAGTTTGTCTTCCTTGACCTCCACTCCTTAAGGTTACAATGGTCACATCTCACCCTACCCAAGgccctgttttttttctgttttcaacCCTCCATTCTCTCACCCGTGGAAGGAAAACCTTCTTTGGATTCAGTTCACGTAAAAGATTATATTTTAACCACACAACTGAAGACAATAACAATGTAGATGTATTCAAACCATGAACCGTAATAAAACCAGCGTTTTGTGAAGTGGAGTCGGCCGTTACAGCTGACCCCTTCTATTGTTCCCTCTATTGTCACTGGAGTACTATAGCACACAGAGGAACTGTGGGAAAATGAGTTTAGTGGATGATTGTAGTGTGTGAGGAGAGGCTACGACAGAGAGGTTGGGTGATGTCATTTCTACTTTTAATGGATGATTTTTGACTGTTGGTTGGAAAAAAGCACTTTGAAGATGTCACATTGgctgttttaaactaaagcccaaaatggtcccctaagcccctccccccacaagggagaatgaatgcgtgtgcatgagcagtgattgacacgcagttagacaccccgcccctggccctgattggtacatctgaacagggagctgtggattgtttcaaatcacactacaggccgtaggtggtgccagaggagccagatttcttttttttgtattacttgCTTTATAtagttctactcaaacatagggtcagtttaaGCAAATATGAcataaagttagttttataagtattacctactgcacctttaaatgtcACAGACTTAGTTTTCATTGAGTTGAGTTGCAAAAGGATTCCCATGGAAGCAAATATTGATGATTGGCTGAGGCCAGTAGGTACATTCCAGGAGGTGTTATGGTATGTGCCCAGAAGCATGAAAGTAAGAGGACTCTTGATCTGTAGCTGGTGTTTAATGGAAAGTTCAACCCACAGCAGTAAAAATAAAGCAATGTGCCTTTAATCTGTTGAACCATCAACAGTCGTCTCATGGTAGCTTCCAGTTTGAGCTAGTTGAGCTTATGCATTCAGTGTAATAGGTGAGTGGGATCTCAGTTTATGTAGAgactgtttgtgtgcatgtacagtGGCGAGATTAGATACATTAAGTGTCTAAGCCCGGTTGCATTAGTTGCATATGGTTCATATAAATACACTGCAAACTCAGTTATGTCTCGAGCTGAAGTCACATATgaatatttcatttgttttttaaaagccaaGTCCAGAGCAAGGCAAGAAACATGGCCCATTAAATACATATAATAAAGTGAGTAGGAGATGGATCCAGTGactgtattgtgtgaaatgtgacaaaaacaaatggaaaGTATGTGTCCATGTGTGCCAGAGCTGCACTTGACAAACTTGCTATTTTGTGGTCCAAAGATGTAAAGTATGTAAATGTGAAGCCCCTCTCTTTTTGAAATTTGCCAAGAGCCAACACAAACTGTTCATCAAAGAGATAGTCCACAGGCATGCATACGTTTTAGAAATCTGAGGTTTGTGAGGATTTTATGTGACTTGATGATTTTATGTGTCTGCCATTTTCAACCGTAAAAGTATATAAGAGTGTATTTGAAAGAttgtctctcctcttctcttcatcAACATCATTACATCAGCAACAGAACCAGTTCAGTAGCAGTCTCTTTTGTGCTGTCTTTCCAGACAACCTTATGTCTTTTTTGGGCCAACCCCTAGCACCTGACCTACACATACTCTGATAAAAACCACTCCGTTAGGTCTAATGGCCAAAGCAGACGCACTGTTCTGATCTACCTTATTCTTACAAATCCAGGTTAGAATGTTTCAACTATTAGGAGTTGATGCTAGTCTTGACTCTTTTGCTGCCCAATTCATCTTGTCCTGTACTGTAATCTTTGTCCCTTTATACTCATTCATTTTCTCCTTCTTTATCCCCCGGTCGCTTTCTCTCCGCTACTCCTCCCATGCGCTGAGATCCCTCGGCGTCCGGTTACGTTCGCCAGAGCTCTTGCTACGGGCCTTCCTGGCGCTCTCCTGCGCTTGGCGGTATTTCTCCAGCATGCTCTTGTGTTTCCTCCTCAGCTTGTCGTTGCACCACATCCTCTCACAGTACTCCTCCACGTGTGGCAGGTTCGACGGCCCAATCAGCTGCATGATATCCTTGAACCATGTACGCGATTGGCCGATTTGGCTTGATGAGCCGCCCCTGCTGTATGCGCTACAAGGCATCCAGGCCCTGTAGCTTCCTGTGGACCGGTCTTTGAACGTGTCGGAGAGGCCAGCGGTGTCACGTGCCATGAGTTCGTCTACAGTCTCCCCCTGGAGGACTTCGAGAGTAAGGCGGGCCAGGGTCTGTGTGAAGCCATGCTCTCGAGAGCGGCAGATGTAGACGCCTTCGTCCTGGCGGAAGAGACGACGAAACAGAAGGCCCTGCTCTGTAGACATCACCCGT

Function

symbol description
sema3g Predicted to enable chemorepellent activity and semaphorin receptor binding activity. Predicted to be involved in several processes, including generation of neurons; neural crest cell migration; and semaphorin-plexin signaling pathway. Located in extracellular exosome.

NR:

description
PREDICTED: semaphorin-3G isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71453 True 4504 TUCP 0.40 2 26961347 26966023

Neighbor

gene id symbol gene type direction distance location
chdh chdh coding downstream 185542 26765089 ~ 26775805 (-)
LOC120559562 tkt coding downstream 316767 26627296 ~ 26644580 (-)
LOC120559020 LOC104941497 coding downstream 476563 26476362 ~ 26484784 (-)
si:dkey-11f4.7 LOC104941497,LOC103384507,LOC102293335 coding downstream 485272 26444951 ~ 26476075 (-)
LOC120559754 prelid3b,LOC102797510,LOC100690371 coding downstream 518702 26435683 ~ 26442645 (-)
sema3b sema3b coding upstream 23777 26989800 ~ 27076351 (-)
zgc:136971 NA coding upstream 180480 27146503 ~ 27156987 (-)
amt amt coding upstream 205650 27171673 ~ 27183156 (-)
LOC120559022 NA coding upstream 227259 27193282 ~ 27202420 (-)
LOC120559934 NA coding upstream 232689 27198712 ~ 27198827 (-)
LOC120559521 NA non-coding downstream 142777 26817017 ~ 26818570 (-)
LOC120559916 NA non-coding downstream 160193 26797405 ~ 26801154 (-)
G53398 NA non-coding downstream 164140 26796491 ~ 26797207 (-)
G53395 cacna1d non-coding downstream 208308 26750010 ~ 26753039 (-)
G53382 LOC103362754,LOC107086658,LOC100689745,LOC101161804,LOC104940874,LOC105936371 non-coding downstream 297662 26620041 ~ 26663685 (-)
LOC120558995 NA non-coding upstream 247509 27213532 ~ 27215246 (-)
G53540 NA non-coding upstream 287585 27253608 ~ 27255158 (-)
LOC120558937 NA non-coding upstream 336369 27302392 ~ 27305566 (-)
G53608 NA non-coding upstream 593398 27559421 ~ 27595325 (-)
G53619 NA non-coding upstream 678153 27644176 ~ 27644595 (-)
selenok selenok other downstream 166257 26792452 ~ 26795090 (-)
dcp1a dcp1a other downstream 303026 26646814 ~ 26658321 (-)
LOC120559114 LOC101164642,LOC104966947,LOC100690915,LOC104926428,LOC102195969,LOC101062277 other downstream 559037 26392012 ~ 26402310 (-)
G53196 NA other downstream 746465 26212993 ~ 26214882 (-)
emc1 NA other downstream 814102 26136998 ~ 26147245 (-)
ifrd2 ifrd2,LOC104928016,LOC104966933 other upstream 191565 27157588 ~ 27171232 (-)
hyal3 LOC103359396 other upstream 223025 27189048 ~ 27199911 (-)
xpc xpc other upstream 678760 27644783 ~ 27660646 (-)
LOC120558759 NA other upstream 879241 27845264 ~ 27930515 (-)
LOC120559779 LOC104918355,LOC103374204,LOC103385013 other upstream 1187159 28153182 ~ 28186527 (-)

Expression


Co-expression Network