G53398


Basic Information

Item Value
gene id G53398
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 26796491 ~ 26797207 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU71393
TAAGGTGCGAAACCAAGCAGCAACCATAATCCCATAAGagtcttaaaaaataaagttcctCTACTGCcactgtgaaaaataaaaaacaaatgcgTACTTTTTGAAATATGAAGTGATTTTTTATTCCTGAGATTTCAGGTTCTTAGTTGTATATCTCTGTAATGTGTCTTCTAACATGTCTTGACTgtgattttgaaaaaaagacattaagaCTTGAAGAGAAGTACTGTGTGTTTTGGGGCGACAGCTTCTCAGGTTATCGTGCTCAACTGGTTGCTGCTTGCTTATCCCATCTCAGCTTCACCCAGACTCTACCCAAACCCAAACTCCAGGTATTAGAACATTCTTTCAGCAAACTATATAATGTCACTATGATATGATAAATCTAAATGTTGGGCACGTTCACAAGCACTACTTAGTCTTTGCTGCAAATGTATAGAGTGACAATTGACCCCAACATAAGGTATCTGTATTATCAACTCCCATGCTACCTTTGCTTTTGTATACCAAATTTCACATTTTGTAGCACCTTCATACAGGGACGGGAGGCAGCATTTAGTGTCTATGGTCTTTGCCTCTGGAATAGCCAGAATAGCTGAGGGAGTTACAATCTGTAAATACCTTAAAGAGGAACCTGGAAACTTACCTTTTCAGTTTAGCATTCTCTTGGTCTTcatccattttttatttaatttccttgtattgtattgttaagCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71393 True 717 lncRNA 0.37 1 26796491 26797207

Neighbor

gene id symbol gene type direction distance location
chdh chdh coding downstream 20686 26765089 ~ 26775805 (-)
LOC120559562 tkt coding downstream 151911 26627296 ~ 26644580 (-)
LOC120559020 LOC104941497 coding downstream 311707 26476362 ~ 26484784 (-)
si:dkey-11f4.7 LOC104941497,LOC103384507,LOC102293335 coding downstream 320416 26444951 ~ 26476075 (-)
LOC120559754 prelid3b,LOC102797510,LOC100690371 coding downstream 353846 26435683 ~ 26442645 (-)
sema3b sema3b coding upstream 192593 26989800 ~ 27076351 (-)
zgc:136971 NA coding upstream 349296 27146503 ~ 27156987 (-)
amt amt coding upstream 374466 27171673 ~ 27183156 (-)
LOC120559022 NA coding upstream 396075 27193282 ~ 27202420 (-)
LOC120559934 NA coding upstream 401505 27198712 ~ 27198827 (-)
G53395 cacna1d non-coding downstream 43452 26750010 ~ 26753039 (-)
G53382 LOC103362754,LOC107086658,LOC100689745,LOC101161804,LOC104940874,LOC105936371 non-coding downstream 132806 26620041 ~ 26663685 (-)
G53366 NA non-coding downstream 201613 26591029 ~ 26594878 (-)
G53359 LOC104943886 non-coding downstream 221212 26574152 ~ 26575279 (-)
LOC120559888 NA non-coding downstream 225519 26570591 ~ 26570972 (-)
LOC120559916 NA non-coding upstream 198 26797405 ~ 26801154 (-)
LOC120559521 NA non-coding upstream 19810 26817017 ~ 26818570 (-)
LOC120558995 NA non-coding upstream 416325 27213532 ~ 27215246 (-)
G53540 NA non-coding upstream 456401 27253608 ~ 27255158 (-)
LOC120558937 NA non-coding upstream 505185 27302392 ~ 27305566 (-)
selenok selenok other downstream 1401 26792452 ~ 26795090 (-)
dcp1a dcp1a other downstream 138170 26646814 ~ 26658321 (-)
LOC120559114 LOC101164642,LOC104966947,LOC100690915,LOC104926428,LOC102195969,LOC101062277 other downstream 394181 26392012 ~ 26402310 (-)
G53196 NA other downstream 581609 26212993 ~ 26214882 (-)
emc1 NA other downstream 649246 26136998 ~ 26147245 (-)
G53444 sema3g other upstream 164140 26961347 ~ 26966023 (-)
ifrd2 ifrd2,LOC104928016,LOC104966933 other upstream 360381 27157588 ~ 27171232 (-)
hyal3 LOC103359396 other upstream 391841 27189048 ~ 27199911 (-)
xpc xpc other upstream 847576 27644783 ~ 27660646 (-)
LOC120558759 NA other upstream 1048057 27845264 ~ 27930515 (-)

Expression


Co-expression Network