LOC120559017


Basic Information

Item Value
gene id LOC120559017
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 26228890 ~ 26232414 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800441.1
ATGGATCTGTCTGGTGCTGTGTTTCTTTCCTTAGGCTGTCTGATGCTGCAGTTCGCTGATGGGGAACTGGATTACATCTCTCAGGGACAGGGGATGGAGCTGCAGGGCAACTTCTCCATCGCTGGACTCTTTCCTCTTCACTACACAAATGGACAAAGTGCTGCTGTGCCTGCATTGGGTCCATGCAATGAAGGTACACCCAACAAACATGGATTTCACTTATTGCAAGCCATGAGATTTGCTGTGGAAGAAATCAACAACAGCACCGGACCGCAACCTCTTTTACCAGGGGTGAAGCTGGGCTACCAGCTTTACGATATCTGCTCCTTACCAGCCAGTGTCCTTGCCACACTGGACCTGCTGAAGCAGCAGTATCAAAGCCCCTCTACACCTGAGACGGAGGGAGACCCAAACTACAACAACAGTCAAACGGCAGTGGCTGTGATTGGGCCAGATAGCAGCAGCGCGTCTTTCACCCCCGCTGCTTTACTCGGGGCCTATCTTGTACCACAAATCTCTTATGAAGcatcaaatgaaatgctgagtaACAAGTTCCTCTATCCAGCCTTTTTCCGCACAATCCCCAGCGACAAGAACCAGGTGGCAGCTATGATTCAGCTTCTGATCCGTTTCAACTGGACCTGGATCGCTCTCTTAGGCAGTGACAATGACTATGGCCTGCAGGGAATGCAGAGTCTGTCCCAGCAAGCACCAGACCACGGCATCTGCATTGCCTACCAAGGAATCATCCCTTTGTATAGCAATGACACAATCCAGACCATGGGGAACATGGTGGAAAGCATACTGACGACCCAAGTCAACACCATTGTGGTATTCTCCAGCAAGTCAAAACTCAGGGACTTCTTCCCATTTGTCATTGAGCGGAACGTGACAGGTAAGGTGTGGATTGGGTCGGAGGACTGGTCAGTGGCTACTCTCATATCAGGGATACCTGGTATCCACACCATCGGCACTGTGGTTGGCGTAGCCATCAAATCTGCAGCCATATTTGGTTTTGAGGAGTTTGAGAGAAAGGTAGTTGAGGCTTCAATGCAGCACAATGACACCCAAGTCTCCAATGTTACCATGAGCCCAGACAATGACTGTCTACAGAGCACTGACCTGTACAGCCTCGCCAGGAAGAAGTTTACTCTGGAGGAATATGACATCACCTCCTCCTTTAATGTGTATACGGCAGTGTATGCTGTAGCTCATGCTCTGCACCAAGCACTTGGTTGTGATTCTGGAGAGTGCCAAAGGAGGAGGGTGTATCCATGGGAGCTGCTCTCGTGGCTTAAGGAGGTGCGATTCTCACTGCACAACACCTCTGTGTATTTCGACGTGAATGGTGACCCGCCCACAGGATATGACATTGTTTCCTGGGTTTGGAAGGGGACTGACTGGTCAGTCCGAGTGGTGGGCTCCTTCAGCCCAGATCCCATTACGCTCACAGTGGATGCAGATCAAATTAAGTGGGACGACACGGGAAATTCAAAACCAGTGCCCCTGTCCATCTGCTCTCCACCTTGCCCGAGAGGCTACAAGAAGCTGCTGACAGGGCAACACACATGCTGCTTCGACTGCCAGGCCTGCCCCTCTGCTACATTTCTCAATATAAGTGAATCCACTACATGCCAGCCTTGTCTCCCGGAGGAGTGGGCTCCTCCGAGCAGCGAGCAGTGTCTGAACAGGACCATCCTGCTGCTCGCCTGGGATGCCCCCCTCTCCATCGCCCTGCTCTTCTTTCTGGCCACCTGTCTTCTCATGACCTTGAGCTCTGCAATAATCCTCCTGCTCAACCTGAACACTCCCGTGGCCAAGTCTGCCGGAGGCCGCACCTGCCTCCTGATGCTGGCAGCCCTGACTGTCGCTGCCATGAGCTCTTTGTGCCATTTTGGCCAGCCGTCTCCTCTGGCTTGCATCCTCAAGCAGCCTCTATTCATCTTTAGCTTCACTGTGTGCCTGGCCTGCATCACTGTGCGCTCCCTCCAGGTCGTCTGCATTTTTAAATTTGCATCCAAGCTGCCACCAGCCTATGACAAGTGGGCCAAAAAACACGGGCCAGAGTTTACCATTTTCCTGCTGTCCATTACCATCTTGCTCATTTCTGTGCTCCGTGTGGCCGTCAACAGTCCCCAGCCGTCCCAGGATCTCAACTTTTACGAGGACAGCATTGTGTTAGAGTGCAGTAATACACTCTCACCTGGTGCAGGCCTCGAGCTCGCTTATGTATCAATGCTCAGCATCCTCTGCTTCTCTTTCAGCTACATGGGCAAAGACCTGCCAGCCAACTACAACGAGGCCAAGTGTGTGACCTTTAGCCTCATGGTGTACATGGTCTCCTGGATGAGCTTCTTCACCATCTACCTCATCAGCAGAGGCCCATTCACAATGGCTGCGAACGTGTTCGCCATACTCTTCAGCGTCCTGGCCTTCCTGGCGGGCTACTTCCTGCCCAAAATTTATATTATTGTCCTGAGGCCGCAAATGAACACCACTGCCCATTTCCAGAACTGTATTCAAATGTATACCATGAGCAAACCATGA

Function

GO: NA

KEGG:

id description
K04624 TAS1R1; taste receptor type 1 member 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800441.1 True 2547 mRNA 0.52 6 26228890 26232414

Neighbor

gene id symbol gene type direction distance location
LOC120558512 LOC108236765 coding downstream 2443 26225129 ~ 26226447 (-)
LOC120559533 NA coding downstream 109556 26109567 ~ 26119334 (-)
taf10 taf10 coding downstream 127494 26096325 ~ 26101396 (-)
ppih ppih coding downstream 133313 26078812 ~ 26095577 (-)
ybx1 ybx1 coding downstream 152242 26071585 ~ 26076648 (-)
LOC120558305 NA coding upstream 44001 26276415 ~ 26286289 (-)
LOC120559019 LOC102791945 coding upstream 54134 26286548 ~ 26315880 (-)
kif5aa LOC103362778,LOC100691451 coding upstream 93476 26325890 ~ 26348279 (-)
mbd6 LOC103362776 coding upstream 118374 26350788 ~ 26360818 (-)
actr5 actr5,LOC102798407 coding upstream 175780 26408194 ~ 26414981 (-)
G53162 NA non-coding downstream 16749 26185427 ~ 26212141 (-)
G53194 ubr4 non-coding downstream 20750 26207689 ~ 26208140 (-)
G53185 NA non-coding downstream 33719 26194498 ~ 26195171 (-)
G53179 NA non-coding downstream 39176 26185856 ~ 26189714 (-)
G53161 NA non-coding downstream 92059 26134261 ~ 26136831 (-)
G53240 NA non-coding upstream 131906 26364320 ~ 26364799 (-)
G53324 NA non-coding upstream 168589 26401003 ~ 26580105 (-)
G53335 NA non-coding upstream 210668 26443082 ~ 26444898 (-)
G53346 NA non-coding upstream 272035 26504449 ~ 26537256 (-)
G53349 vapb non-coding upstream 296137 26528551 ~ 26533028 (-)
G53196 NA other downstream 14008 26212993 ~ 26214882 (-)
emc1 NA other downstream 81645 26136998 ~ 26147245 (-)
acot7 acot7,LOC102782704 other downstream 256568 25910755 ~ 25972322 (-)
phactr3a LOC100701276,LOC107550338,LOC107551495,LOC104947949,LOC103365918,LOC106955159 other downstream 1443885 24750431 ~ 24785005 (-)
masp2 masp2,LOC106536928,LOC103357864,LOC107086886 other downstream 1889434 24335149 ~ 24339456 (-)
LOC120559114 LOC101164642,LOC104966947,LOC100690915,LOC104926428,LOC102195969,LOC101062277 other upstream 159598 26392012 ~ 26402310 (-)
dcp1a dcp1a other upstream 414400 26646814 ~ 26658321 (-)
selenok selenok other upstream 560038 26792452 ~ 26795090 (-)
G53444 sema3g other upstream 728933 26961347 ~ 26966023 (-)
ifrd2 ifrd2,LOC104928016,LOC104966933 other upstream 925174 27157588 ~ 27171232 (-)

Expression


Co-expression Network