G53346


Basic Information

Item Value
gene id G53346
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 26504449 ~ 26537256 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU71326
GTTACTTACTATCTGAAATTTCTTTTTGGCACACACCTTACAATCTCGTTTTAAATTTAGAATTAAATACCAAAAAAGTGCAAGCTTTTCACAGAAGCAGACAGttggggatggggggggggaatttatatattttaattcatTATGATGCTACATGATCCATGTTGgttgtttattttcttcctttACTACAGTATGTTAATAACTTTGCCAGTTATATTTTTATGTACATACAAAAGAGTATCCAATTACTGTGTGATTACATTGCTGTGTGACTGTATCTTTGCATGTGTGGTCTGAAGCGctaatgtcgttttttttttcttctttaatgtAGTGTGTATTCACAGGTCAGTCCTCCTCCCAGACATCCACATTCCCACTTCTCTGCTCCCAGAGCTCCCTCAGGCAACGAAAAATACagatatttattctttttttttttcttgaacaACCTGCTTAGATGGTCATGAGACAGCCGAGATAATACAGCTGTGTTGTCTCAGTTACCGCACGACCACCAGAGCCCAacaggaaacaaaagaaaaagataatctctctctcacacacactcactcacacactcactctctctctctctctctctctctctctctcacacgcacacacccacgaTGGTCCCTTTTAAGAAGACGGtatgtcttttttgttttgccaATAAACTTCAACactcaaaaaagaaaagagaataataatcataataaatcCAGGTCATTTCATGCAGAGTGGACACTTGAATATAGTGCATTTGAATATTATAAACAACAGAAGCATTGTGGCTACATGATaagaaaaaaaggcaaacaGCTGCTGTAATACACTAGAGGACGCAAATACAATACTCCATGGGCAAAATTAAACAAGGTGGCCAAAGCTAttgttacatactgtatgttatatATTGAAAATGTCCAGGGGGCTGCCTCTCTCAAACTGATGAAGTATCAAGACAAGTAAAAATGTGAACTAGAAAAATCTGATGTCTTTTACTAAATATTacagctttgtttttttaactacaTCATCGTGCAGCATAAATTCTTATCCATATCTTGATGCGTACCAGGTTATAATTTCacaaatggccaaaaaaattgatttattgGATTTCTACTGATTCCTTGGGCCAGTAAGCGACAAACATGATCAAGTTTTAAACTGATTTCCAACAAAGACCCcccatttttctgttgtgtACAGGAAATCTGTTTagattacattttgttttcaaatcaCCCCTCTTCCTCCGCTCTTAAACAGCCTGTGATTTcatcgtctaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71326 True 1466 lncRNA 0.38 2 26504449 26537256

Neighbor

gene id symbol gene type direction distance location
LOC120559020 LOC104941497 coding downstream 19665 26476362 ~ 26484784 (-)
si:dkey-11f4.7 LOC104941497,LOC103384507,LOC102293335 coding downstream 28374 26444951 ~ 26476075 (-)
LOC120559754 prelid3b,LOC102797510,LOC100690371 coding downstream 61804 26435683 ~ 26442645 (-)
actr5 actr5,LOC102798407 coding downstream 89468 26408194 ~ 26414981 (-)
mbd6 LOC103362776 coding downstream 143631 26350788 ~ 26360818 (-)
LOC120559562 tkt coding upstream 90040 26627296 ~ 26644580 (-)
chdh chdh coding upstream 227833 26765089 ~ 26775805 (-)
sema3b sema3b coding upstream 452544 26989800 ~ 27076351 (-)
zgc:136971 NA coding upstream 609247 27146503 ~ 27156987 (-)
amt amt coding upstream 634417 27171673 ~ 27183156 (-)
G53335 NA non-coding downstream 59551 26443082 ~ 26444898 (-)
G53240 NA non-coding downstream 139650 26364320 ~ 26364799 (-)
G53162 NA non-coding downstream 292308 26185427 ~ 26212141 (-)
G53352 chmp4b,LOC107390603,LOC107086700,LOC106511320 non-coding upstream 2651 26539907 ~ 26542627 (-)
LOC120559888 NA non-coding upstream 33335 26570591 ~ 26570972 (-)
G53359 LOC104943886 non-coding upstream 36896 26574152 ~ 26575279 (-)
G53366 NA non-coding upstream 53773 26591029 ~ 26594878 (-)
G53382 LOC103362754,LOC107086658,LOC100689745,LOC101161804,LOC104940874,LOC105936371 non-coding upstream 82785 26620041 ~ 26663685 (-)
LOC120559114 LOC101164642,LOC104966947,LOC100690915,LOC104926428,LOC102195969,LOC101062277 other downstream 102139 26392012 ~ 26402310 (-)
G53196 NA other downstream 289567 26212993 ~ 26214882 (-)
emc1 NA other downstream 357204 26136998 ~ 26147245 (-)
acot7 acot7,LOC102782704 other downstream 532127 25910755 ~ 25972322 (-)
phactr3a LOC100701276,LOC107550338,LOC107551495,LOC104947949,LOC103365918,LOC106955159 other downstream 1719444 24750431 ~ 24785005 (-)
dcp1a dcp1a other upstream 109558 26646814 ~ 26658321 (-)
selenok selenok other upstream 255196 26792452 ~ 26795090 (-)
G53444 sema3g other upstream 424091 26961347 ~ 26966023 (-)
ifrd2 ifrd2,LOC104928016,LOC104966933 other upstream 620332 27157588 ~ 27171232 (-)
hyal3 LOC103359396 other upstream 651792 27189048 ~ 27199911 (-)

Expression


Co-expression Network