G53240


Basic Information

Item Value
gene id G53240
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 26364320 ~ 26364799 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU71167
CCGACAGAAAACTCCATTATTTTTTTGCTCGGAatctgtaagaaaaaaaaaaaaacagtgggaaACTGTGAATTTGGGATTACATGGATCGCTATGGTTGTCGGAATACATTTGAATGCTAGACGGTTTAGGAGAGCAGAGACCAAAGCAACGGCTGGATAACTGTGCACCGGGAGCGGGACATCCTTAAGTCTTGTTGGGACACTCCACAATCAAGTAAATTCAGCTAGTTAGCTCTGCTAGCCTAGCTGATAGCGTTAGCCCCGAGATACCAGGCGCAGTAAAATGAAGCGTTATTGCCCTTTGTTTTTAAATCGGAATGGCAGACGTTGCATAAACGCTGAGAGCTGATTGACCGCACCAATACGCGCTTTGAATGATTAAATTGTTCGTTTTACAGTTAATTACTAAAGTATCGGCCGTTTTCAAAACATTATCTGGCTAGTCAGTTAGCTTGACAGCTAACTCTTGATTCTCCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71167 True 480 lncRNA 0.43 1 26364320 26364799

Neighbor

gene id symbol gene type direction distance location
mbd6 LOC103362776 coding downstream 3502 26350788 ~ 26360818 (-)
kif5aa LOC103362778,LOC100691451 coding downstream 16041 26325890 ~ 26348279 (-)
LOC120559019 LOC102791945 coding downstream 48440 26286548 ~ 26315880 (-)
LOC120558305 NA coding downstream 78031 26276415 ~ 26286289 (-)
LOC120559017 NA coding downstream 131906 26228890 ~ 26232414 (-)
actr5 actr5,LOC102798407 coding upstream 43395 26408194 ~ 26414981 (-)
LOC120559754 prelid3b,LOC102797510,LOC100690371 coding upstream 70884 26435683 ~ 26442645 (-)
si:dkey-11f4.7 LOC104941497,LOC103384507,LOC102293335 coding upstream 80152 26444951 ~ 26476075 (-)
LOC120559020 LOC104941497 coding upstream 111563 26476362 ~ 26484784 (-)
LOC120559562 tkt coding upstream 262497 26627296 ~ 26644580 (-)
G53162 NA non-coding downstream 152179 26185427 ~ 26212141 (-)
G53194 ubr4 non-coding downstream 156180 26207689 ~ 26208140 (-)
G53185 NA non-coding downstream 169149 26194498 ~ 26195171 (-)
G53179 NA non-coding downstream 174606 26185856 ~ 26189714 (-)
G53161 NA non-coding downstream 227489 26134261 ~ 26136831 (-)
G53324 NA non-coding upstream 36204 26401003 ~ 26580105 (-)
G53335 NA non-coding upstream 78283 26443082 ~ 26444898 (-)
G53346 NA non-coding upstream 139650 26504449 ~ 26537256 (-)
G53349 vapb non-coding upstream 163752 26528551 ~ 26533028 (-)
G53352 chmp4b,LOC107390603,LOC107086700,LOC106511320 non-coding upstream 175108 26539907 ~ 26542627 (-)
G53196 NA other downstream 149438 26212993 ~ 26214882 (-)
emc1 NA other downstream 217075 26136998 ~ 26147245 (-)
acot7 acot7,LOC102782704 other downstream 391998 25910755 ~ 25972322 (-)
phactr3a LOC100701276,LOC107550338,LOC107551495,LOC104947949,LOC103365918,LOC106955159 other downstream 1579315 24750431 ~ 24785005 (-)
masp2 masp2,LOC106536928,LOC103357864,LOC107086886 other downstream 2024864 24335149 ~ 24339456 (-)
LOC120559114 LOC101164642,LOC104966947,LOC100690915,LOC104926428,LOC102195969,LOC101062277 other upstream 27213 26392012 ~ 26402310 (-)
dcp1a dcp1a other upstream 282015 26646814 ~ 26658321 (-)
selenok selenok other upstream 427653 26792452 ~ 26795090 (-)
G53444 sema3g other upstream 596548 26961347 ~ 26966023 (-)
ifrd2 ifrd2,LOC104928016,LOC104966933 other upstream 792789 27157588 ~ 27171232 (-)

Expression


Co-expression Network