Gene
RNA
| Item | Value |
|---|---|
| gene id | G58383 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053117.1 |
| NCBI id | CM020914.1 |
| chromosome length | 43979800 |
| location | 2062074 ~ 2062569 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU78505 | False | 469 | lncRNA | 0.38 | 1 | 2062101 | 2062569 |
| TU78506 | True | 496 | lncRNA | 0.36 | 1 | 2062074 | 2062569 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ccdc92 | ccdc92 | coding | upstream | 7593 | 2037572 ~ 2054481 (+) |
| ncor2 | ncor2 | coding | upstream | 113359 | 1804636 ~ 1948715 (+) |
| ep400 | ep400 | coding | upstream | 290401 | 1736678 ~ 1771673 (+) |
| ulk1a | NA | coding | upstream | 326459 | 1721805 ~ 1735615 (+) |
| adgrd1 | adgrd1 | coding | upstream | 341181 | 1680081 ~ 1720893 (+) |
| kctd9a | kctd9 | coding | downstream | 77528 | 2140097 ~ 2156589 (+) |
| LOC120560792 | gnrh1 | coding | downstream | 95043 | 2157612 ~ 2160627 (+) |
| klhl22 | klhl22 | coding | downstream | 130343 | 2192912 ~ 2203066 (+) |
| LOC120560154 | nefl,LOC102797482,LOC104959585 | coding | downstream | 200340 | 2262909 ~ 2266743 (+) |
| LOC120561412 | lrrtm4,LOC104959581,LOC103353625,LOC101488074,LOC100703069,LOC102799547 | coding | downstream | 303181 | 2365750 ~ 2434942 (+) |
| G58372 | NA | non-coding | upstream | 110802 | 1933007 ~ 1951272 (+) |
| G58347 | NA | non-coding | upstream | 333741 | 1701907 ~ 1728333 (+) |
| G58286 | NA | non-coding | upstream | 499554 | 1476674 ~ 1562520 (+) |
| G58269 | NA | non-coding | upstream | 704825 | 1356850 ~ 1357249 (+) |
| G58260 | NA | non-coding | upstream | 728191 | 1333501 ~ 1333883 (+) |
| G58384 | NA | non-coding | downstream | 51 | 2062620 ~ 2063002 (+) |
| G58390 | lgi3 | non-coding | downstream | 5016 | 2067585 ~ 2071483 (+) |
| G58382 | NA | non-coding | downstream | 12251 | 2074820 ~ 2089793 (+) |
| G58478 | NA | non-coding | downstream | 69379 | 2131948 ~ 2132274 (+) |
| G58574 | NA | non-coding | downstream | 373815 | 2436384 ~ 2437472 (+) |
| lmx1bb | lmx1b,LOC102213269,LOC100696266 | other | upstream | 1224213 | 789405 ~ 837861 (+) |
| LOC120560799 | NA | other | upstream | 1849691 | 210742 ~ 212383 (+) |
| dock5 | dock5 | other | downstream | 211109 | 2273678 ~ 2312665 (+) |
| lman2lb | NA | other | downstream | 815805 | 2878374 ~ 2883861 (+) |
| LOC120560521 | tjp2 | other | downstream | 1372596 | 3435165 ~ 3522756 (+) |
| G59086 | NA | other | downstream | 2054710 | 4117279 ~ 4117631 (+) |
| G59172 | sub1 | other | downstream | 2361572 | 4424141 ~ 4429981 (+) |
