kctd9a (kctd9)


Basic Information

Item Value
gene id kctd9a
gene name kctd9
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 2140097 ~ 2156589 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803640.1
CTCTTGAAGGCATCTTTTGTCTCGTGTTGTTGTCTGatgcagctagctagccagcttgAATCTGCAAGCGTTAGCTGGCAAACGCCACATTTTTGTGGAAATTGTAATAAAGCACTTATAACCAAAGCGACTAAAGAATGAGAAGAGTTACCCTCTTTGTTAACGGGACATCTAAAAATGGCAAGGTTGTAGCAGTATACGGGACCTTGTCTGACTTACTATCCGTAGCAAGCAATAAATTAGGAATCAAAGCTGCCTCTTTATACAATGGAAAGGGTGGTCTCATAGATGACATTGCCCTTATAAGAGATGACGACGTGTTGTATGTGTCAGAAGGAGAACCATTCATTGACCCTCAAAATGAAGCCAAGGTTGCATCCAGTCAGCATGGAGCACACACTGATTGGCTGACCCTTAATATAGGTGGTCGTCCCTTCACCACCACCAGGAGCACCCTGGTCAGCAAGGAGCCAGAGAGTATGCTTGCTCACATGTTTCGAGAGAAAGATGTGTGGGGGAACAAGCAGGACGAGCACGGGGCTTACCTTATCGACCGCAGCCCGGAATACTTTGAGCCTATTCTCAACTACCTGAGACACGGTCAGCTCATTATCAATGAAGGCATAAATATACGAGGTGTCCTCGAGGAGGCTCGCTTCTTTGGAATTGAGCAGCTCGCTGAACAGCTGGAAGCAGCAATCAAGAACACGCAGCCACCTGAGGACCACTCTCCCATTTCCCGCAAAGAGTTTGTTCGTTTCCTCCTGGCAACGCCCACCAAGTCAGAGCTCCGCTGTCAGGGTCTTAATTTTAGTGGCGCCGATCTGTCCCGACTTGATTTGCGCTATATCAATTTCAAAATGGCTAACCTCAGCCGCTGCAATCTGACCCACGCCAACCTGTGCTGTTCCAATCTGGAGCGGGCTGACCTGTCTGGAGCCAACCTGGATGGTGCCAACTTACAAGGGGTGAAGATGCTCTGTTCCAATGCAGAGGGAGCTTCTCTCAGAGGATGCAATTTTGAAGATCCATCTGGACTGAAGGCCAACCTGGAAGgtgCTAACCTGAAAGGAGTTGACATGGAAGGAAGCCAAATGACCGGCATCAACCTGCGTGTGGCCACTCTGAAAAATGCTAAGCTGAAGAACTGTAACCTGCGGGGAGCCACTTTAGCAGGGACGGATCTCGAGAACTGTGACCTGTCCGGCTGCGATCTACAAGAAGCCAACCTGAGAGGCTCCAATGTCAAGGGAGCCATTTTTGAAGAGATGCTGACCCCTCTGCACATGTCACAGAGTGTCAGATAACTGGACACACACATCAGTCTCCAGTGTGGGGCCACAGCTGGCTTCTTTATGGCTCTTTCCCCTCCAGTATATCCCCCTACTTTcaatctctctctgcctgtctagCAGTACAGGCAGTTGTATGCACATCCCTGGCATTCCACCTATATTGTGTTAGCTTTAAATATCTTGCACTAGAATTTATTCAGGGTTGTCTATGTATGTTTGGACCGTAGggtgtttttaaatgttcagcTGCATATATCACCAAAACAGGAATAATGTTCCTGGTGTATGTAGATGTGTCTGGATGCAATCCATTGACTATACTCGTATAACGTTCTACATAATTTATATTCACTTTGTTTTACTTGACATGTTAATGGGAGTCAAAATCCAATTATGACCTGTGTGCAGTCAAGTTCAGAGCACTGAGCTGCACTGGATGCTGCTGTAGCAGAAGTAGGTGTCCCTTACCAATAACTGTGTCGTTTATATATTCCTCTTGAAGTATGTAACTTTAATTTTTGCTGGATTCAACATATTATAAAGGAAGCAATGCAAGCCAAAGCCATAATGATAGCACAGTCTAAAAGgctaaaagtgctgtttgtgCACAGTCAAACTATGCGACAGGCTAGTTTTAAACACAGCTTGGGTATGCAATACGTCATTTACAGCTGTGAGGTTTCTCTTTTCTTACTTTTAAAtattgtgttctttttttttttttttttcgctccGTGAATCtacctctttttttaaatccggTGTGCGAGTGATCCACAATTGCATGAATTTGACTGTGGCACTGCTTATTGCAATGTTTATGTATGACATTCATTATTCTTCAGTTTCCCATTCAGAGAAAAGCCGGTGTGCTTTAACAGAAAGCCATTCTCACGTGTTAATGTTGTCAAAGTGGGTTCGCCTGGAAACATGCTCCATGTATCGATGTATATCACTTAATCATGCTTTGAAACTTATTTGCACAAGTATATGTTAACTTGTACCatgttatacatttttttcaccaaaaaaaagagatgttttTGGTGCTTGTAATCTAATGTAAATCAAATCCAATGTTTCCCATACTTCCAAAAAAAAACGAGCATTAttattagagctgggcgatatggagaaaatcagatatcacgatatttttgaccaaatacgtagatatcgatattgcaacgatattgtatggtag

Function

symbol description
kctd9 Enables cullin family protein binding activity; identical protein binding activity; and protein self-association. Predicted to be involved in intracellular signal transduction; protein homooligomerization; and protein ubiquitination.

NR:

description
PREDICTED: BTB/POZ domain-containing protein KCTD9

GO: NA

KEGG:

id description
K21919 KCTD9; BTB/POZ domain-containing protein KCTD9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803640.1 True 2499 mRNA 0.44 12 2140097 2156589

Neighbor

gene id symbol gene type direction distance location
ccdc92 ccdc92 coding upstream 85616 2037572 ~ 2054481 (+)
ncor2 ncor2 coding upstream 191382 1804636 ~ 1948715 (+)
ep400 ep400 coding upstream 368424 1736678 ~ 1771673 (+)
ulk1a NA coding upstream 404482 1721805 ~ 1735615 (+)
adgrd1 adgrd1 coding upstream 419204 1680081 ~ 1720893 (+)
LOC120560792 gnrh1 coding downstream 1023 2157612 ~ 2160627 (+)
klhl22 klhl22 coding downstream 36323 2192912 ~ 2203066 (+)
LOC120560154 nefl,LOC102797482,LOC104959585 coding downstream 106320 2262909 ~ 2266743 (+)
LOC120561412 lrrtm4,LOC104959581,LOC103353625,LOC101488074,LOC100703069,LOC102799547 coding downstream 209161 2365750 ~ 2434942 (+)
LOC120560453 NA coding downstream 381365 2537954 ~ 2539133 (+)
G58478 NA non-coding upstream 7823 2131948 ~ 2132274 (+)
G58382 NA non-coding upstream 50304 2074820 ~ 2089793 (+)
G58390 lgi3 non-coding upstream 68614 2067585 ~ 2071483 (+)
G58384 NA non-coding upstream 77095 2062620 ~ 2063002 (+)
G58383 NA non-coding upstream 77528 2062074 ~ 2062569 (+)
G58574 NA non-coding downstream 279795 2436384 ~ 2437472 (+)
G58597 NA non-coding downstream 366850 2523439 ~ 2523638 (+)
G58598 NA non-coding downstream 367052 2523641 ~ 2523934 (+)
G58599 NA non-coding downstream 367618 2524207 ~ 2524567 (+)
G58601 NA non-coding downstream 369463 2526052 ~ 2526270 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other upstream 1302236 789405 ~ 837861 (+)
LOC120560799 NA other upstream 1927714 210742 ~ 212383 (+)
dock5 dock5 other downstream 117089 2273678 ~ 2312665 (+)
lman2lb NA other downstream 721785 2878374 ~ 2883861 (+)
LOC120560521 tjp2 other downstream 1278576 3435165 ~ 3522756 (+)
G59086 NA other downstream 1960690 4117279 ~ 4117631 (+)
G59172 sub1 other downstream 2267552 4424141 ~ 4429981 (+)

Expression


Co-expression Network