G58603


Basic Information

Item Value
gene id G58603
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 2530492 ~ 2530723 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU78772
cgccactgtaaagctactcaagatgggcttctctcatggtcaatccgtggttgatcacatgatgaataactgtggccctgatctcattAGAGATGGCTCTCCCTTCtgcctcttcttccctcctcctcctcatcctcctcgttgttgtcccctgtctctccctcctcctccccttgctttctgtctattgttggcatccattgttcaaaacaggtcaTCTGACCTTTtacct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78772 True 232 lncRNA 0.50 1 2530492 2530723

Neighbor

gene id symbol gene type direction distance location
LOC120561412 lrrtm4,LOC104959581,LOC103353625,LOC101488074,LOC100703069,LOC102799547 coding upstream 95550 2365750 ~ 2434942 (+)
LOC120560154 nefl,LOC102797482,LOC104959585 coding upstream 263749 2262909 ~ 2266743 (+)
klhl22 klhl22 coding upstream 327426 2192912 ~ 2203066 (+)
LOC120560792 gnrh1 coding upstream 369865 2157612 ~ 2160627 (+)
kctd9a kctd9 coding upstream 373903 2140097 ~ 2156589 (+)
LOC120560453 NA coding downstream 7231 2537954 ~ 2539133 (+)
anapc5 anapc5,LOC102800026 coding downstream 30026 2560749 ~ 2577050 (+)
lrrc75ba lrrc75b,LOC104956515,LOC102775864 coding downstream 70167 2600890 ~ 2616973 (+)
asphd2 asphd2 coding downstream 99781 2630504 ~ 2634683 (+)
cabp1a cabp1,LOC100709699,LOC102206763,LOC102781601,LOC104946293 coding downstream 109429 2640152 ~ 2654597 (+)
G58601 NA non-coding upstream 4222 2526052 ~ 2526270 (+)
G58599 NA non-coding upstream 5925 2524207 ~ 2524567 (+)
G58598 NA non-coding upstream 6558 2523641 ~ 2523934 (+)
G58597 NA non-coding upstream 6854 2523439 ~ 2523638 (+)
G58574 NA non-coding upstream 93020 2436384 ~ 2437472 (+)
G58618 ggt5,LOC104956559 non-coding downstream 93394 2624117 ~ 2625352 (+)
G58650 NA non-coding downstream 132680 2663403 ~ 2665691 (+)
G58651 NA non-coding downstream 135095 2665818 ~ 2667041 (+)
G58652 NA non-coding downstream 136535 2667258 ~ 2667835 (+)
G58653 NA non-coding downstream 137363 2668086 ~ 2668677 (+)
dock5 dock5 other upstream 217827 2273678 ~ 2312665 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other upstream 1692631 789405 ~ 837861 (+)
LOC120560799 NA other upstream 2318109 210742 ~ 212383 (+)
lman2lb NA other downstream 347651 2878374 ~ 2883861 (+)
LOC120560521 tjp2 other downstream 904442 3435165 ~ 3522756 (+)
G59086 NA other downstream 1586556 4117279 ~ 4117631 (+)
G59172 sub1 other downstream 1893418 4424141 ~ 4429981 (+)
trnal-aag_1 NA other downstream 1901448 4432171 ~ 4432253 (+)

Expression


Co-expression Network