entr1


Basic Information

Item Value
gene id entr1
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 43025265 ~ 43038474 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU91783
CGGGATCGTTCCTTGTTGCTTCGTGGTCCTGTTcctgcaggagaggagaggagagagacacggcgggacagacagacaggatgatcgataaccctaaccctatcaATAACCGTCTCAAGCACCTGTGACGTCATGTCCAAACAGAGGAGCTCTGCTAAAACTCTGATCATCACAGACGATGAGCAGCTGGAGGCTGAGGAGCTGAACCCGTTCTCCTTCAGAGAGTTTCTTCGCTGGAAGAACCAGGACCCAGAActggaccaggaccaggaccaggaccaggaactggaccaggaccaggacccaGAActggaccaggaccaggacccaGAACTTGACCAGGACCCAGAACTTGACCAGGACCAGGAGAGCGAGaggTTACTTGACGGCGGCtacgtgacctttgacccctcagtCAGCTGTTTCTGTCCGG
>XM_039802505.1
CACGTGAGTTGGGGAAGCATTCGACTGTGTTTCCGGGATCGTTCCTTGTTGCTTCGTGGTCCTGTTcctgcaggagaggagaggagagagacacggcgggacagacagacaggatgatcgataaccctaaccctatcaATAACCGTCTCAAGCACCTGTGACGTCATGTCCAAACAGAGGAGCTCTGCTAAAACTCTGATCATCACAGACGCAGATGAGCAGCTGGAGGCTGAGGAGCTGAACCCGTTCTCCTTCAGAGAGTTTCTTCGCTGGAAGAACCAGGACCCAGAActggaccaggaccaggaccaggaccaggaactggaccaggaccaggacccaGAActggaccaggaccaggacccaGAACTTGACCAGGACCCAGAACTTGACCAGGACCAGGAGAGCGAGaggTTACTTGACGGCGGCtacgtgacctttgacccctcagtCAGCTGTTTCTGTCCGGAGGAGGAATGGGGGCGGGGCCTCCAGTGTGGTGTTGACAGCACCTCCTCCCTCTgcacagaggaggaagaagaggagggggaggaggaggaggaggaggagaggaccAGGTTCTCCTCCAAACCTGAAGTCCAGccaggaggagggggaggaggaagaggaagaggaggaagaggaggaggggaaggaagaggaggaggaagaggaggagggggaggaagaggaggagataaCTATGAAGGAGACGATGAGacgtctctttctgtctctgaagCCAGCATCTCCTGCAGCCAGATacagcagctgcagGAGGAGAACTTGTCTCTGAGGAGGTCTCTCAgggagcagcagaggagatcAGAGGCTAGCGAACGCAGGGTGCGGGAGCTGTCGGAGGAGCTGCTGCAGCGGAGGCGTCGGGAGGAGAAGGAGGCGCAGGACCTGGAGAGCATGGTTCAGTCTGTGGAGCAGAACCTCAGCCTGATGacgaagCGAGCGGTGAAAGCAGAGACCTGTGTTTCCAAACTGAAGCTGGATCTTCAGCAGCTGCAGatggAGAATGACAGTCTGAAGGCAGCAGAGTCTGAGGTTGTCATGACGATGAGACGCAACGCTCAGGTAGCGTCAGAGTACCTGAACAAGACGGCGAGCCACGCCCACTCCTCCATCAGccgTCTGTTGGGAGAAGCAGAGACTCTGTGTCTCGTGTCTCAGCTGCTTCAGTCCATTGATAAGATCTCAGACCTGGACCCAGAGTCCTGAAGTCCTGCACACGCTCAGACTGCTCCGGACCCGGTCTGGTCCGGCCCGCTGGACGTCTCCACGGCAACACGTCTCCACACCAACACGTCAACACGGCACACCTCAGCACGTGGTCCTGCTACAACATGAAGCTGGAGACTGGCTGTAGCTGCACTTCTACCAATACACTAAATGCTTCTGAACCAATGGGATGGCTCCATTTCTGAACACTGTCCACGTGTCCTGTACCACATGTCATGCTGTTAGGACAAAGTTAAATAAGTTCAACATGTCAtctgcagccccccccccccccattagcATGTAGCCACATGTAGCGTCTGTTGACGTTGACTCGTCCAGCGGGTGTGATCTAGCATCACCCTCAGACGGGAGACATTTGTCCTCTCAggcattttattctgaaagtgAAGATCCTGACgtttgatgacatcacagcaggCGGAGGAAATGCtggctgctgattggtcggttggATTAtagcaatgtgttttttttgtattg
>XM_039802506.1
CGTGAGTTGGGGAAGCATTCGACTGTGTTTCCGGGATCGTTCCTTGTTGCTTCGTGGTCCTGTTcctgcaggagaggagaggagagagacacggcgggacagacagacaggatgatcgataaccctaaccctatcaATAACCGTCTCAAGCACCTGTGACGTCATGTCCAAACAGAGGAGCTCTGCTAAAACTCTGATCATCACAGACGATGAGCAGCTGGAGGCTGAGGAGCTGAACCCGTTCTCCTTCAGAGAGTTTCTTCGCTGGAAGAACCAGGACCCAGAActggaccaggaccaggaccaggaccaggaactggaccaggaccaggacccaGAActggaccaggaccaggacccaGAACTTGACCAGGACCCAGAACTTGACCAGGACCAGGAGAGCGAGaggTTACTTGACGGCGGCtacgtgacctttgacccctcagtCAGCTGTTTCTGTCCGGAGGAGGAATGGGGGCGGGGCCTCCAGTGTGGTGTTGACAGCACCTCCTCCCTCTgcacagaggaggaagaagaggagggggaggaggaggaggaggaggagaggaccAGGTTCTCCTCCAAACCTGAAGTCCAGccaggaggagggggaggaggaagaggaagaggaggaagaggaggaggggaaggaagaggaggaggaagaggaggagggggaggaagaggaggagataaCTATGAAGGAGACGATGAGacgtctctttctgtctctgaagCCAGCATCTCCTGCAGCCAGATacagcagctgcagGAGGAGAACTTGTCTCTGAGGAGGTCTCTCAgggagcagcagaggagatcAGAGGCTAGCGAACGCAGGGTGCGGGAGCTGTCGGAGGAGCTGCTGCAGCGGAGGCGTCGGGAGGAGAAGGAGGCGCAGGACCTGGAGAGCATGGTTCAGTCTGTGGAGCAGAACCTCAGCCTGATGacgaagCGAGCGGTGAAAGCAGAGACCTGTGTTTCCAAACTGAAGCTGGATCTTCAGCAGCTGCAGatggAGAATGACAGTCTGAAGGCAGCAGAGTCTGAGGTTGTCATGACGATGAGACGCAACGCTCAGGTAGCGTCAGAGTACCTGAACAAGACGGCGAGCCACGCCCACTCCTCCATCAGccgTCTGTTGGGAGAAGCAGAGACTCTGTGTCTCGTGTCTCAGCTGCTTCAGTCCATTGATAAGATCTCAGACCTGGACCCAGAGTCCTGAAGTCCTGCACACGCTCAGACTGCTCCGGACCCGGTCTGGTCCGGCCCGCTGGACGTCTCCACGGCAACACGTCTCCACACCAACACGTCAACACGGCACACCTCAGCACGTGGTCCTGCTACAACATGAAGCTGGAGACTGGCTGTAGCTGCACTTCTACCAATACACTAAATGCTTCTGAACCAATGGGATGGCTCCATTTCTGAACACTGTCCACGTGTCCTGTACCACATGTCATGCTGTTAGGACAAAGTTAAATAAGTTCAACATGTCAtctgcagccccccccccccccattagcATGTAGCCACATGTAGCGTCTGTTGACGTTGACTCGTCCAGCGGGTGTGATCTAGCATCACCCTCAGACGGGAGACATTTGTCCTCTCAggcattttattctgaaagtgAAGATCCTGACgtttgatgacatcacagcaggCGGAGGAAATGCtggctgctgattggtcggttggATTAtagcaatgtgttttttttgtatt

Function

NR:

description
serologically defined colon cancer antigen 3 homolog

GO: NA

KEGG:

id description
K22938 SDCCAG3, ENTR1; serologically defined colon cancer antigen 3

RNA

RNA id representative length rna type GC content exon number start site end site
TU91783 False 433 TUCP 0.56 3 43025298 43031225
XM_039802505.1 True 1734 mRNA 0.55 10 43025265 43038474
XM_039802506.1 False 1728 mRNA 0.55 10 43025267 43038473

Neighbor

gene id symbol gene type direction distance location
LOC120560229 wdr5,LOC103397940,LOC107686885 coding upstream 369331 42644746 ~ 42655934 (+)
LOC120560195 NA coding upstream 382204 42550273 ~ 42643061 (+)
ccdc180 NA coding upstream 490387 42495285 ~ 42534878 (+)
LOC120560205 NA coding upstream 535003 42450281 ~ 42490262 (+)
LOC120561112 LOC101472590 coding upstream 589665 42425703 ~ 42435600 (+)
LOC120561123 NA coding downstream 394296 43432770 ~ 43452377 (+)
LOC120561126 NA coding downstream 693968 43732442 ~ 43767127 (+)
gpsm1a NA coding downstream 730753 43769227 ~ 43775319 (+)
LOC120561432 NA coding downstream 737355 43775829 ~ 43801999 (+)
med27 med27 coding downstream 830399 43868873 ~ 43892461 (+)
G68613 NA non-coding upstream 2426 43020962 ~ 43022839 (+)
G68608 NA non-coding upstream 11425 43004019 ~ 43013840 (+)
G68604 NA non-coding upstream 12193 42997003 ~ 43013072 (+)
G68605 NA non-coding upstream 14641 42998610 ~ 43010624 (+)
G68595 NA non-coding upstream 83149 42941917 ~ 42942116 (+)
G68640 NA non-coding downstream 49242 43087716 ~ 43088425 (+)
G68645 NA non-coding downstream 65505 43103979 ~ 43105662 (+)
G68649 NA non-coding downstream 77207 43115681 ~ 43117092 (+)
G68627 NA non-coding downstream 81662 43120136 ~ 43143844 (+)
G68651 NA non-coding downstream 94723 43133197 ~ 43189067 (+)
G68598 NA other upstream 1446 42964040 ~ 43023819 (+)
LOC120561116 LOC101485158,LOC102302930,LOC100699693,LOC106633016 other upstream 26882 42976146 ~ 42998383 (+)
G68504 NA other upstream 628622 42322473 ~ 42396643 (+)
G68429 NA other upstream 1019304 41909824 ~ 42005961 (+)
LOC120561105 NA other upstream 1086207 41932563 ~ 41939058 (+)
G69274 NA other downstream 212213 43250687 ~ 43251323 (+)
fhip2b LOC104934748,LOC101470392,LOC102195170,LOC102290393,LOC100711782 other downstream 345143 43383617 ~ 43405973 (+)
G69431 NA other downstream 771151 43809625 ~ 43810963 (+)

Expression


Co-expression Network