G68598


Basic Information

Item Value
gene id G68598
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42964040 ~ 43023819 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU91750
GAGCTCATGCAGccCGAGATGAGTGGGCGGGACGTCCTGCAGCAGCGCCCGGCGCTGCAGCGCTGGAAGGGCCGTGTGCAGGCGGCCGTCGGCGAGGCCTTCCACCGGGCGCACGCCGTGCTGTACGCCGTCAGAGACCGCCACGCAGCCAAGCTGTGACATCACACACAGGAGCCAATCAGCTGGGAGGATTTAATCATCAATCTGATTCTATTGATTATTAGATTTATAAACATGTCCGACAGTCCAGCTGTTTgttttaataactttatttaaacgGCAGACTGTCAGGCGAACAGGATGATGTCACAGCcctttgtccaatcagctgtcaGCTCAGAGATCACATGTTTATCTGCAGCAGAACTTCTGACAGTtgtaaatgaaatgtttgaTAATTATAGTCGGATTTAGAGACACTTTA
>TU91752
tctctgtgtgtgtgtgtgtgtgtctctctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctctgtgtgtgtgtctgtctgtgtgtgtgtatgtgtgtgtctctctgtgtgtgtgtcgctgtgtgtgtgtgtctctgtgtgtttctccacATGTATGGGAGGGGCTTGTTGATTGGCTGGTTCTGAGCgtgctctgtgtgtctctctgcagccCGAGATGAGTGGGCGGGACGTCCTGCAGCAGCGCCCGGCGCTGCAGCGCTGGAAGGGCCGTGTGCAGGCGGCCGTCGGCGAGGCCTTCCACCGGGCGCACGCCGTGCTGTACGCCGTCAGAGACCGCCACGCAGCCAAGCTGTGACATCACACACAGGAGCCAATCAGCTGGGAGGATTTAATCATCAATCTGATTCTATTGATTATTAGATTTATAAACATGTCCGACAtgtgtgtttgtgtgtattgatggttaaaggagaactcctggCCATTtgtgtgcctcttaacagacacaaaatgcaattaaaatgtcaaaaaagggataacacaacattttcctgatgctaac
>TU91754
gtgtgtgtgtgtgtgtctctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtctctctgtgtgtgtgtctgtctgtgtgtgtgtatgtgtgtctgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtctgtgtgtgtgtgtctgtctgtgtgtggtgtctgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91750 False 424 TUCP 0.51 2 42964040 42965620
TU91752 True 576 lncRNA 0.52 2 42964987 42998567
TU91754 False 345 lncRNA 0.50 3 42964294 43023819

Neighbor

gene id symbol gene type direction distance location
LOC120560229 wdr5,LOC103397940,LOC107686885 coding upstream 308106 42644746 ~ 42655934 (+)
LOC120560195 NA coding upstream 320979 42550273 ~ 42643061 (+)
ccdc180 NA coding upstream 429162 42495285 ~ 42534878 (+)
LOC120560205 NA coding upstream 473778 42450281 ~ 42490262 (+)
LOC120561112 LOC101472590 coding upstream 528440 42425703 ~ 42435600 (+)
LOC120561123 NA coding downstream 408951 43432770 ~ 43452377 (+)
LOC120561126 NA coding downstream 708623 43732442 ~ 43767127 (+)
gpsm1a NA coding downstream 745408 43769227 ~ 43775319 (+)
LOC120561432 NA coding downstream 752010 43775829 ~ 43801999 (+)
med27 med27 coding downstream 845054 43868873 ~ 43892461 (+)
G68595 NA non-coding upstream 21924 42941917 ~ 42942116 (+)
G68594 NA non-coding upstream 22341 42941492 ~ 42941699 (+)
LOC120560254 NA non-coding upstream 112232 42849746 ~ 42851808 (+)
G68552 NA non-coding upstream 162197 42727020 ~ 42801843 (+)
G68555 NA non-coding upstream 177402 42716044 ~ 42786638 (+)
G68624 NA non-coding downstream 2849 43026668 ~ 43029668 (+)
G68625 NA non-coding downstream 4798 43028617 ~ 43030425 (+)
G68628 NA non-coding downstream 11094 43034913 ~ 43036178 (+)
G68640 NA non-coding downstream 63897 43087716 ~ 43088425 (+)
G68645 NA non-coding downstream 80160 43103979 ~ 43105662 (+)
G68504 NA other upstream 567397 42322473 ~ 42396643 (+)
G68429 NA other upstream 958079 41909824 ~ 42005961 (+)
LOC120561105 NA other upstream 1024982 41932563 ~ 41939058 (+)
aebp1b LOC104948491,LOC103367614 other upstream 1171129 41720800 ~ 41792911 (+)
G68349 NA other upstream 1559226 41366584 ~ 41404814 (+)
entr1 NA other downstream 1446 43025265 ~ 43038474 (+)
G68626 NA other downstream 8448 43032267 ~ 43162404 (+)
G69274 NA other downstream 226868 43250687 ~ 43251323 (+)
fhip2b LOC104934748,LOC101470392,LOC102195170,LOC102290393,LOC100711782 other downstream 359798 43383617 ~ 43405973 (+)
G69431 NA other downstream 785806 43809625 ~ 43810963 (+)

Expression


Co-expression Network