LOC120560205


Basic Information

Item Value
gene id LOC120560205
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42450281 ~ 42490262 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802473.1
TTCAAGGGGCGTTTCTGATTTCGACCTTGGAAAATCTGAGTTCCGAGTACaaaaattataaatgaaatgtattgCAGTAAAGCTCCACCTCTTCCTGTATGCAGATCCAACCTGAGGACAGCACATGTGAGGatcagagcagagagcagacagaCGGGAAGACGGACGCAGAGAGACCCTCCACCTGGACATGGACCacctgatgctgctgctgctgctgtggagcTCAGGACTCCAGGCTGAAGGAGAACTCACCTCAACAgAGTCTGTCAGGTTGGTGGGAGGAGCCAGTCGCTGTAGAGGAAGACTGGAGGTGAAACATAAAGGAGAATGGAGACGAGTGGATAGTGACTATGACTCTGACTGGACCCTGAAGACAGCAGCTGCTGCCTGCAGAGAGTCAGACTGTGGCTCTGCTGTTTCTGTAGAGATTGAAGAGTCCTCAGTCAGATCTGTGTGGTGGATCAGGTCTGACTGTGTTGAGTCTGGATCTGCTCTGAGGGAGTGTGTAAGACCAGATTCCTCTTCCTCCGTCCTTTATCTCACCTGCTCAGgtaGGCGATGCTGCGCTCCGGTCatgtctccctcgctctcaacctcttctctctaCACACTCAACTCTAGACACACTCACTCAGATTTTCACAGTGTTACTGTCAGGTTTCACAAAAACAGGAACCCAAATGCAGACCCAGATGAGgATGCAGAGGTGGTCTGTAGGGAGCTTGGCTGTGGGGCTCCTTCAGTCCTCCAGGGGGCGCTCTATGGAGAAGTGGAGCCTCCAATGAGGACCAAAGAGTTCCAGTGTGGAGGCCATGAGTCTGCTCTCCTGGACTGTAGAAGCTCAGGCTCAGATAGAAACACCTGCTCACCTGGAAAAGCTGTTGgactcacctgctcagAGCCTGTCAGGTTGGTGGGAGGAGCCAGTCGCTGTGCAGGAACACTGGAGGTTAAATATAACGGAGAATGGAGACCTGTCATTTACCTTGACTCTGACTGGCACCTGAAGGTAGTAGATCTTGCCTGCAGAGAGTCAGACTGTGGCTCTGCTGTTTCTGTAGAGAGAGAAGAGTCCTCAGACAGATCTGTGTGGAGGATCAGGTCTGGCTGTGATGCGTCTGTATCTGCTGTGAGGGAGTGTGCATCATCacattcctcttcctccttccttcatcTCACCTGCTCAGACCTGCTGCTTCAGCCCAACATCTCTGTGTCCTCCTCCATGGTCGGGGTCTCCGAGGAGGACCAGCAGGAGGTGTTCCAGGTGTTCTGGGGCTCCACCTTCACCATCAGCTGCTCCATCCAGCCACAGTACCCAGGAGGCTCCTTCCAGCTCACCTTCACCTCCTCCAACTCAGCACACAACTCCACCCAGCCAGCTGTCAATCACTctgcccacttcctgtttcctgctgcAGAGCCCGCCCACCAAGGAAGCTACAGCTGTGTTTATCACCTCTATGTTTTCTCTCATAACTTCTCCTCTGAGAGCAGTGTGCTCTCTCTCAGCGTCATGGATCCGAGGCCTCTAATCATCAGAGCGATCCTCCTGCCGCTGATTCTGCTGGTGGAGAACATTGTCCTTTACTTCTACTGTAGGGCCAGAAGGGGTCAGCTGCCGTGCAGACAGAAGAACATTGATGTCCAGGCCAGCAAGGGGCAGCTGCCGTGCAGACAGAAGAACATTGAGCTGGATTATTATAACCTGGGTGTCCCTGCAGCTGAAGGAGGGCCGACTGAAGAGGAAGGATCTCAGGGAGCAGAGTAGCACCTCCAAGGAGCTCATGGAGGTTAAGCTTTTTATGCACCTTTTTACCCCCACTTTTACCCGCAAATTCCCATTTATTTACCCTTACAAAACTTCAATTAATTTAGATTGGCACATGCTGGGGACTTGTGTACAAAATCTGGAGTCTCTGGGTCCAATCTGAGAGGAAATATGagttttaaaaagtacattttactgACAAGCATTATTCTTCCCATATGTCCAGACCCTGATTTAGGTACCCAGTAGGGGTCCTTAGGATGGACCCAGGACCACCAGAACTGGGTCATAAATTCTACAGAACTCCTTGATTTGGAAAAGGTTCCAActgatttttaaaatttttttttttcactgaaaccCCCTGGTATTCCCAAAATTTTTAAAGAGCTTTGCCATTCACAAGCACAATTAGAGGGTAACTACCgcttcaacctggaccctattttctatgtttttgtgtctaagttactgatgggaacaaccatctttgacattggtccggTATTAACCCTCCTAACCCCCAAACAGGtttaaaaaagcatgttttgttaaaagatTGCCAAAGAAAAACCACTTACCTCTAGAAAGTAGctgaaaaaacagtagttaccttTCAAGGTACAACTGGAAAGAGTGGTCGATAACCTTAAAATAGCTTCCGCACTCGCCCATTTTTAGTATCCACCCAGGCCAAACTTTCCCATGCGGCCATCTCAATTTCTTCGGTTTTTCCAGCAAGTCGTAACTGGGATAAAGAAAAGAGTCTTTTATTTCACAGCCATTCCAGATTGTTCTCTCCTCAAGACTAAAGTTATCTGCATGTACTGTTGATGTGATCTGACTTACCACCAGATTATGTCAAGTCTCAAACAACACTTGGGctttaaaaacttgaaaaacatCCCTTTTAAAGTAGATTTAGAACAGATTAAAAATGTGCCATTTGCGTTATATCACAAGTCAACTACAGACAATCATATAATTAATCACAATCAGATGTTTTTGTGTTGACATccctaattaaaataaatggaaaaaaaagaattgacaaaaactaaaaattctttgattagGATTTTATCGTGAAACACCAGAAAACGTTCCAGGTTGGTGCATCTGGTGCTATGGTGACGATCTGTTGGTGTTTGGgattaaagaaatacaatgaaGGAATCAAAGTCAtgtcgctcacacacacagtacaatatTAAACATCAGAGGCTGTTTTCACACACATTTCATCTCATTTCATAAGAATGGTTTGTTTTTGTAGTTTAGGACTTTACTTATTGTGTAATGATGGATTTTGCTTACTTTTGTAATTAATGCTTTTTCCTATTTCATGAAATCCAGTTCAGCCCAAAGATTTGAGACAAAAGCGAAACCGTTTAAGAACATTGAAGGAAATGTTGaagcggtctgaaccggcccgtctcagctcgactcaaaccagctgatggtgttgCTGTgactcagctggtgga
>XM_039802474.1
TGGGAGGAATGTCTGGCCAAGGTGGCTGCAACAGCCTACAACCAAGAGGACTGCCATCCTAAAACTACAACATCCAGTTCTGCGTCAGCGAGAGCCAGCTGCCAGCAATCCAGCAGATCCAACCTGAGGACAGCACATGTGAGGatcagagcagagagcagacagaCGGGAAGACGGACGCAGAGAGACCCTCCACCTGGACATGGACCacctgatgctgctgctgctgctgtggagcTCAGGACTCCAGGCTGAAGGAGAACTCACCTCAACAgAGTCTGTCAGGTTGGTGGGAGGAGCCAGTCGCTGTAGAGGAAGACTGGAGGTGAAACATAAAGGAGAATGGAGACGAGTGGATAGTGACTATGACTCTGACTGGACCCTGAAGACAGCAGCTGCTGCCTGCAGAGAGTCAGACTGTGGCTCTGCTGTTTCTGTAGAGATTGAAGAGTCCTCAGTCAGATCTGTGTGGTGGATCAGGTCTGACTGTGTTGAGTCTGGATCTGCTCTGAGGGAGTGTGTAAGACCAGATTCCTCTTCCTCCGTCCTTTATCTCACCTGCTCAGgtaGGCGATGCTGCGCTCCGGTCatgtctccctcgctctcaacctcttctctctaCACACTCAACTCTAGACACACTCACTCAGATTTTCACAGTGTTACTGTCAGGTTTCACAAAAACAGGAACCCAAATGCAGACCCAGATGAGgATGCAGAGGTGGTCTGTAGGGAGCTTGGCTGTGGGGCTCCTTCAGTCCTCCAGGGGGCGCTCTATGGAGAAGTGGAGCCTCCAATGAGGACCAAAGAGTTCCAGTGTGGAGGCCATGAGTCTGCTCTCCTGGACTGTAGAAGCTCAGGCTCAGATAGAAACACCTGCTCACCTGGAAAAGCTGTTGgactcacctgctcagAGCCTGTCAGGTTGGTGGGAGGAGCCAGTCGCTGTGCAGGAACACTGGAGGTTAAATATAACGGAGAATGGAGACCTGTCATTTACCTTGACTCTGACTGGCACCTGAAGGTAGTAGATCTTGCCTGCAGAGAGTCAGACTGTGGCTCTGCTGTTTCTGTAGAGAGAGAAGAGTCCTCAGACAGATCTGTGTGGAGGATCAGGTCTGGCTGTGATGCGTCTGTATCTGCTGTGAGGGAGTGTGCATCATCacattcctcttcctccttccttcatcTCACCTGCTCAGACCTGCTGCTTCAGCCCAACATCTCTGTGTCCTCCTCCATGGTCGGGGTCTCCGAGGAGGACCAGCAGGAGGTGTTCCAGGTGTTCTGGGGCTCCACCTTCACCATCAGCTGCTCCATCCAGCCACAGTACCCAGGAGGCTCCTTCCAGCTCACCTTCACCTCCTCCAACTCAGCACACAACTCCACCCAGCCAGCTGTCAATCACTctgcccacttcctgtttcctgctgcAGAGCCCGCCCACCAAGGAAGCTACAGCTGTGTTTATCACCTCTATGTTTTCTCTCATAACTTCTCCTCTGAGAGCAGTGTGCTCTCTCTCAGCGTCATGGATCCGAGGCCTCTAATCATCAGAGCGATCCTCCTGCCGCTGATTCTGCTGGTGGAGAACATTGTCCTTTACTTCTACTGTAGGGCCAGAAGGGGTCAGCTGCCGTGCAGACAGAAGAACATTGATGTCCAGGCCAGCAAGGGGCAGCTGCCGTGCAGACAGAAGAACATTGAGCTGGATTATTATAACCTGGGTGTCCCTGCAGCTGAAGGAGGGCCGACTGAAGAGGAAGGATCTCAGGGAGCAGAGTAGCACCTCCAAGGAGCTCATGGAGGTTAAGCTTTTTATGCACCTTTTTACCCCCACTTTTACCCGCAAATTCCCATTTATTTACCCTTACAAAACTTCAATTAATTTAGATTGGCACATGCTGGGGACTTGTGTACAAAATCTGGAGTCTCTGGGTCCAATCTGAGAGGAAATATGagttttaaaaagtacattttactgACAAGCATTATTCTTCCCATATGTCCAGACCCTGATTTAGGTACCCAGTAGGGGTCCTTAGGATGGACCCAGGACCACCAGAACTGGGTCATAAATTCTACAGAACTCCTTGATTTGGAAAAGGTTCCAActgatttttaaaatttttttttttcactgaaaccCCCTGGTATTCCCAAAATTTTTAAAGAGCTTTGCCATTCACAAGCACAATTAGAGGGTAACTACCgcttcaacctggaccctattttctatgtttttgtgtctaagttactgatgggaacaaccatctttgacattggtccggTATTAACCCTCCTAACCCCCAAACAGGtttaaaaaagcatgttttgttaaaagatTGCCAAAGAAAAACCACTTACCTCTAGAAAGTAGctgaaaaaacagtagttaccttTCAAGGTACAACTGGAAAGAGTGGTCGATAACCTTAAAATAGCTTCCGCACTCGCCCATTTTTAGTATCCACCCAGGCCAAACTTTCCCATGCGGCCATCTCAATTTCTTCGGTTTTTCCAGCAAGTCGTAACTGGGATAAAGAAAAGAGTCTTTTATTTCACAGCCATTCCAGATTGTTCTCTCCTCAAGACTAAAGTTATCTGCATGTACTGTTGATGTGATCTGACTTACCACCAGATTATGTCAAGTCTCAAACAACACTTGGGctttaaaaacttgaaaaacatCCCTTTTAAAGTAGATTTAGAACAGATTAAAAATGTGCCATTTGCGTTATATCACAAGTCAACTACAGACAATCATATAATTAATCACAATCAGATGTTTTTGTGTTGACATccctaattaaaataaatggaaaaaaaagaattgacaaaaactaaaaattctttgattagGATTTTATCGTGAAACACCAGAAAACGTTCCAGGTTGGTGCATCTGGTGCTATGGTGACGATCTGTTGGTGTTTGGgattaaagaaatacaatgaaGGAATCAAAGTCAtgtcgctcacacacacagtacaatatTAAACATCAGAGGCTGTTTTCACACACATTTCATCTCATTTCATAAGAATGGTTTGTTTTTGTAGTTTAGGACTTTACTTATTGTGTAATGATGGATTTTGCTTACTTTTGTAATTAATGCTTTTTCCTATTTCATGAAATCCAGTTCAGCCCAAAGATTTGAGACAAAAGCGAAACCGTTTAAGAACATTGAAGGAAATGTTGaagcggtctgaaccggcccgtctcagctcgactcaaaccagctgatggtgttgCTGTgactcagctggtgga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802473.1 False 3261 mRNA 0.46 9 42450500 42490262
XM_039802474.1 True 3273 mRNA 0.47 10 42450281 42490262

Neighbor

gene id symbol gene type direction distance location
LOC120561112 LOC101472590 coding upstream 14681 42425703 ~ 42435600 (+)
LOC120560201 NA coding upstream 30175 42322474 ~ 42420106 (+)
LOC120560243 NA coding upstream 38305 42374134 ~ 42411976 (+)
LOC120560192 NA coding upstream 209352 42218162 ~ 42240929 (+)
LOC120560233 LOC103473932 coding upstream 291333 42150631 ~ 42158948 (+)
ccdc180 NA coding downstream 5023 42495285 ~ 42534878 (+)
LOC120560195 NA coding downstream 60011 42550273 ~ 42643061 (+)
LOC120560229 wdr5,LOC103397940,LOC107686885 coding downstream 154484 42644746 ~ 42655934 (+)
LOC120561123 NA coding downstream 942508 43432770 ~ 43452377 (+)
LOC120561126 NA coding downstream 1242180 43732442 ~ 43767127 (+)
G68506 NA non-coding upstream 53879 42385954 ~ 42396402 (+)
G68495 NA non-coding upstream 118635 42278980 ~ 42331646 (+)
G68491 NA non-coding upstream 198674 42249911 ~ 42251607 (+)
G68260 NA non-coding upstream 238708 42189494 ~ 42211573 (+)
G68512 NA non-coding downstream 45005 42535267 ~ 42536646 (+)
G68461 NA non-coding downstream 79250 42569512 ~ 42607617 (+)
G68537 NA non-coding downstream 153594 42643856 ~ 42644077 (+)
G68544 NA non-coding downstream 192032 42682294 ~ 42698899 (+)
G68555 NA non-coding downstream 225782 42716044 ~ 42786638 (+)
G68504 NA other upstream 53638 42322473 ~ 42396643 (+)
G68429 NA other upstream 444320 41909824 ~ 42005961 (+)
LOC120561105 NA other upstream 511223 41932563 ~ 41939058 (+)
aebp1b LOC104948491,LOC103367614 other upstream 657370 41720800 ~ 41792911 (+)
G68349 NA other upstream 1045467 41366584 ~ 41404814 (+)
G68598 NA other downstream 473778 42964040 ~ 43023819 (+)
LOC120561116 LOC101485158,LOC102302930,LOC100699693,LOC106633016 other downstream 485884 42976146 ~ 42998383 (+)
entr1 NA other downstream 535003 43025265 ~ 43038474 (+)
G68626 NA other downstream 542005 43032267 ~ 43162404 (+)
G69274 NA other downstream 760425 43250687 ~ 43251323 (+)

Expression


Co-expression Network