G68544


Basic Information

Item Value
gene id G68544
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42682294 ~ 42698899 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU91670
CATTAAATAACttgtaacttttattttgatgatACAATTGaatcaatcattttcatttatcaaacacaaatgtaaaacatttgGCCAAAATCTCATCAGAAAACAAAAGATAGTATATAAAAAGGGCCAAAAGAAGGCACTTTTACCTTTTAATAGGACTTCTTATACCGTAAAAAAAGGTTTAATCTGACTTCTTACAAAGATGTGCAGGAGGCTTCATATAGAAGTATCAAATACTACTCGAGGTACATAGATTTAAAATCCTTTTTAACCTTTAAACTAAAAGTGATTCTGAGATACTTTGTGAATTAACATTTGGCAAAACCAACAACCAACAAGTTCACGTCATCACTTTAACAGCCACTACTGtccactgtgaaaatactgttAATAACAGAAGTAATAGTCATACGAAGGGAAACTTGACATTAAGATATTTACATCTCATCTTcattcaaaatatttaaaaggtcccatggcatgaaaatgtcactttatgaggttttttaacattaatatgagttccccccccagcctgcctatggtcccccagtggctagaaatggtgataggtgtaaaccgagccctgggtatcctgctctgcctttgagaaaatgaaagctcagatgggccaatcaggaatcttctccttatgaggtcataaggagcaaggttacctcccctttctctgctttgcccaccctgagaatttggcccacccatgagagagagagacatcatggctttcaaacgagcaaactggcagttggtcaaggccacaccccctccaccttgccccccttctctcctcctcaattgctacggacacagaaatggcacatcctaaggaaagctcattgtgggactggctctagtggctggaattctgcaccaaggctgaattttgggaaagagacttcagatacactattaggggaccactaaggtctatataaaacagacttcagatacagcattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggcctatataaaagagacttaagatgcAGTATTacagcatccaaaaagcagcatgccatgggacctttaacattcaGTATCAGAGATGTAACTActgtaaaagtatttcattcagtTCAACAGGTCTCTACGAGAGTTTCAGCTGGATGGTTTCTCCTGTCTATTTTGATCCTCAGATCACTTTTCCCACAATTGCTGCAAAAATGTTGCTCCTCACTTCTGAGGGGTCTTGTCAGTTTTGACCATGAACCACTAGAACTTTGTCAAAATTCAAAGGATCAATATTAGATTATAGTCTACCCTCTGTGGGTTCTCATATGCTTCGTTAAACCTGAACCATCATAGAATCTTTTCTTGCAGATCTTGCAAATGTatggcttctcacctgtgtgagttctcatatGCTTTAATAAGTCTGAAGAGACACAGAATCTTTTCTTGCAGGTATTGCACACGTACGGTTTCTCAACTGTGTGGATTCTTCTCATGTGGACCAACAAGTTACAATTTTGCCCAAACCCTTTTCCACATGTTTTGCAAACATATGGCTTCTCGCCTGTGTGGGTTCTCATATGCTTTAATAAGTCTGAAGAGACACAGAATCTTTTCTTGCAGGTCTTGCACACGtacggcttctcacctgtgtgggcTCTTCTCATGTGGACCAACAAGTTAACATTTTGCCCAAACTCTTTTCCACATGTTTTGCAAACAtacggcttctcacctgtgtgagttctcatgtgctTTAATAAGTCTGAAGAGACACAGAATCTTTTCTTGCAGGTCTTGCAAACGTATGGTTTCTCACGTGTGTGGGCTCTTCTCACATGGATCAACAAGTTACGACTACATCCAAACCCTTTTCCACATGTTTTGCAAGAATaaggcttctcacctgtgtggattctcaagTGTTTCTTTAAACCTGAGTTACACTTAAAGTCTTTCCCACATGTGTCACATATGAAAGACTTTTTACCTGTTTGAGTTTTAGGGTGAATCTCTGACACGTTAGTGTTGTCTACGTTGTTACTGTGACTTCTTCTCTTGCGTCGTCTCTTCTTTGGTTCTGTCTCTGCATTTCTAGTTGATCCTGAGTCTCCATGCTTGCCTCCTTTCTGATCTTGGCTCTCAGCTTCATGAGAGTTGGGAGAGAGGAGCTGGTGGTCACTGTTTGCTTCTGATACCACAGAGGTTAGAACTGGCATGTTGAGCTGCTGGTCAGAGagaacctcctcctccttgcaGACATGTTGCTGTGGGAGC
>TU91671
CTGTGACTTCTGCTCTTGCGTCGTCTCTTCTTTGGTTCTGGCTCTGCATTTCTAGTTGATCCTGAGTCTCCATGCTTGCCTCCTTTCTGATCTTGGCTCTCAGCTTCATGAGAGTTGTGAGAGAGGAGCTGGTGGTCACTGTTTGCTTCTGATACCACAGAGGTTAGAACTGGCATGTTGAGCTGCTGGTCAGAGagaacctcctcctccttgcaGACATGTTGCTGTGGGAGC

Function

GO: NA

KEGG:

id description
ko03030 DNA replication
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU91670 True 2306 lncRNA 0.41 3 42696160 42698899
TU91671 False 234 lncRNA 0.51 2 42682294 42698899

Neighbor

gene id symbol gene type direction distance location
LOC120560229 wdr5,LOC103397940,LOC107686885 coding upstream 26360 42644746 ~ 42655934 (+)
LOC120560195 NA coding upstream 39233 42550273 ~ 42643061 (+)
ccdc180 NA coding upstream 147416 42495285 ~ 42534878 (+)
LOC120560205 NA coding upstream 192032 42450281 ~ 42490262 (+)
LOC120561112 LOC101472590 coding upstream 246694 42425703 ~ 42435600 (+)
LOC120561123 NA coding downstream 733871 43432770 ~ 43452377 (+)
LOC120561126 NA coding downstream 1033543 43732442 ~ 43767127 (+)
gpsm1a NA coding downstream 1070328 43769227 ~ 43775319 (+)
LOC120561432 NA coding downstream 1076930 43775829 ~ 43801999 (+)
med27 med27 coding downstream 1169974 43868873 ~ 43892461 (+)
G68537 NA non-coding upstream 38217 42643856 ~ 42644077 (+)
G68461 NA non-coding upstream 74677 42569512 ~ 42607617 (+)
G68512 NA non-coding upstream 145648 42535267 ~ 42536646 (+)
G68507 NA non-coding upstream 190041 42355497 ~ 42492253 (+)
G68506 NA non-coding upstream 285892 42385954 ~ 42396402 (+)
G68555 NA non-coding downstream 17145 42716044 ~ 42786638 (+)
G68552 NA non-coding downstream 28121 42727020 ~ 42801843 (+)
LOC120560254 NA non-coding downstream 150847 42849746 ~ 42851808 (+)
G68594 NA non-coding downstream 242593 42941492 ~ 42941699 (+)
G68595 NA non-coding downstream 243018 42941917 ~ 42942116 (+)
G68504 NA other upstream 285651 42322473 ~ 42396643 (+)
G68429 NA other upstream 676333 41909824 ~ 42005961 (+)
LOC120561105 NA other upstream 743236 41932563 ~ 41939058 (+)
aebp1b LOC104948491,LOC103367614 other upstream 889383 41720800 ~ 41792911 (+)
G68349 NA other upstream 1277480 41366584 ~ 41404814 (+)
G68598 NA other downstream 265141 42964040 ~ 43023819 (+)
LOC120561116 LOC101485158,LOC102302930,LOC100699693,LOC106633016 other downstream 277247 42976146 ~ 42998383 (+)
entr1 NA other downstream 326366 43025265 ~ 43038474 (+)
G68626 NA other downstream 333368 43032267 ~ 43162404 (+)
G69274 NA other downstream 551788 43250687 ~ 43251323 (+)

Expression


Co-expression Network