LOC120560254


Basic Information

Item Value
gene id LOC120560254
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42849746 ~ 42851808 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639460.1
TAAGCCTGATCAACAAGTGAAAAGAGTCAGATAAGAGGAAAGAGTTTGAAAACTGATTTGACGACCACTGCTGAATTGGCCTGCTAAGAGGAAGAGGCACTAATGATTCCAGAAGAGGAAGCCAAAGAAGAAGACCTACACAGACTTTGAAATGGaTCTCTCAATTGCCATGATGACCAAGATATTCAA

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639460.1 True 189 lncRNA 0.41 3 42849746 42851808

Neighbor

gene id symbol gene type direction distance location
LOC120560229 wdr5,LOC103397940,LOC107686885 coding upstream 193812 42644746 ~ 42655934 (+)
LOC120560195 NA coding upstream 206685 42550273 ~ 42643061 (+)
ccdc180 NA coding upstream 314868 42495285 ~ 42534878 (+)
LOC120560205 NA coding upstream 359484 42450281 ~ 42490262 (+)
LOC120561112 LOC101472590 coding upstream 414146 42425703 ~ 42435600 (+)
LOC120561123 NA coding downstream 580962 43432770 ~ 43452377 (+)
LOC120561126 NA coding downstream 880634 43732442 ~ 43767127 (+)
gpsm1a NA coding downstream 917419 43769227 ~ 43775319 (+)
LOC120561432 NA coding downstream 924021 43775829 ~ 43801999 (+)
med27 med27 coding downstream 1017065 43868873 ~ 43892461 (+)
G68552 NA non-coding upstream 47903 42727020 ~ 42801843 (+)
G68555 NA non-coding upstream 63108 42716044 ~ 42786638 (+)
G68544 NA non-coding upstream 150847 42682294 ~ 42698899 (+)
G68537 NA non-coding upstream 205669 42643856 ~ 42644077 (+)
G68461 NA non-coding upstream 242129 42569512 ~ 42607617 (+)
G68594 NA non-coding downstream 89684 42941492 ~ 42941699 (+)
G68595 NA non-coding downstream 90109 42941917 ~ 42942116 (+)
G68604 NA non-coding downstream 145195 42997003 ~ 43013072 (+)
G68605 NA non-coding downstream 146802 42998610 ~ 43010624 (+)
G68608 NA non-coding downstream 152211 43004019 ~ 43013840 (+)
G68504 NA other upstream 453103 42322473 ~ 42396643 (+)
G68429 NA other upstream 843785 41909824 ~ 42005961 (+)
LOC120561105 NA other upstream 910688 41932563 ~ 41939058 (+)
aebp1b LOC104948491,LOC103367614 other upstream 1056835 41720800 ~ 41792911 (+)
G68349 NA other upstream 1444932 41366584 ~ 41404814 (+)
G68598 NA other downstream 112232 42964040 ~ 43023819 (+)
LOC120561116 LOC101485158,LOC102302930,LOC100699693,LOC106633016 other downstream 124338 42976146 ~ 42998383 (+)
entr1 NA other downstream 173457 43025265 ~ 43038474 (+)
G68626 NA other downstream 180459 43032267 ~ 43162404 (+)
G69274 NA other downstream 398879 43250687 ~ 43251323 (+)

Expression


Co-expression Network