LOC120560201


Basic Information

Item Value
gene id LOC120560201
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42322474 ~ 42420106 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802462.1
ATCGGTCCAAGCAACAGATCCAACCTGAGGACAGCACATGTGAGGatcagagcagagagcagacagaCGGGAAGACGGACGCAGAGAGACCCTCCACCTGGACATGGACCacctgatgctgctgctgctgctgtggagcTCAGGACTCCAGGCTGAAGGAGAACTCAACTCAACAgAGTCTGTCAGGTTGGTGGGAAGAGACAGTCGCTGTAGAGGAACACTGGAGCTGAAACATGAAGGAGAATGGAGACCATTGGGCTACCCTGTCTGGACCCTGAAGACAGCAGCTGCTGCCTGCAGAGAGTCAGACTGTGGCTCTGCTGTTTCtttagaagagagagaagagtccTCAGACAGATCTGTGTGGAGGATCAGCTCTGTCTGTGTTGAGTCTGGATCTGCTCTGAGGGAGTGTGCTGCATCAGGTTCCTCTGTCATTCATCTCACCTGTTCAGACTCTGTCAGGCTGGTGAATGGGACCAGTCTGTGCTCAGGCAGACTGGAGGTGAAGACTAACCAGTCTACCCAGTGctggtcctcagtgtgtgaagatGATTTTGACCAGCAGGATGCAGAGGTGGTCTGTAGGGAGCTTGGCTGTGGGCCTCCTTCAGTCCTCCAGGGGGCGCTCTATGGAGAAGTGGAGCCTCCAATGAGGACCAAAGAGTTCCAGTGTGGAGGCCATGAGTCTGCTCTCCTGGACTGTAGCAGCTCAGGCTCAGATAGAAACACCTGCTCACCTGGAAAAGCTGTTGgactcacctgctcagAGTCTGTCAGGTTGGTGGGAGGAGACAGTCGCTGTAGAGGATCACTGGAGGTGAAACAAGGagaatggagaccagtgaatggCTGGTACTCTGACTGGACCCTGAAGACAGCAGCTGCTGCCTGCAGAGAGTCAGACTGTGGCTCTGCTGTTTCTGTAGTAAAGAGAGAAGAGTCCTCAGACAGATCTGTGTGGTGGATCAGGTCTGACTGTGCTGAGTCTGGATCTACTCTGAGGGAGTGTGCTGCATCATTTTACTCTTCCTCCATCCTTAATCTCACCTGTTCAGACTCTGTCAGGCTGGTGAATGGGACCAGTCTGTGCTCAGGCAGACTGGAGGTGAAGACTAACCAGTCTACCCAGCGctggtcctcagtgtgtgaagatGACTTTGACCAGCAGGATGCAGAGGTGGTCTGTAGGGAGCTTGGCTGTGGGGCTCCTTCAGTCCTCCAGGGGGCGCTCTATGGAGAAGTAGAGCCTCCAATGAGGACCAAAGAGTTCCAGTGTGGAGGCCATGAGTCTGCTCTCCTGGACTGTAGCAGCTCAGGCTCAGATAGAAACACCTGCTCACCTGGAAAAGCTGTTGgactcacctgctcagAGCCTGATGCTGTCAGGTTGGTGGGAGGAGTCAGTCGCTGTAGAGGATCACTGGAGGTGAAACAAGGAGAATGGAGACCAGTGGATGGCTATAACTCTGAGTGGACCCTGAAGAGAGCAGCTGCTGCCTGCAGAGAGTTAGACTGTGGCTCTGCGGTTTCTGTAGAGAGAGAAGAGTCCTCATACAGATCTATGTGGAGGATCTGGTCTGACTGTGTTGAGTCTGGATCTACTCTGAGGGAGTGTGCTGCGTCAGATTCCTCTTCCTCCGTCCTTCATCTCACCTGTTCAGGCCTGCTGCTTCAGCCCAACATCTCTGTGTCCTCCACCATGGTTGGGGTCTCCGAGGAGGACCAGCAGGAGGTGTTCCAGGTGTTCTGGGGCTCCACCTTCACCATCAGCTGCTCCATCCAGCCACAGTACCCAGGAGGCTCCTTCCAGCTCACCTTCACCTCCTCCAACTCAGCACACAACTACACCCAGCCAGCTGTCAATCACTctgcccacttcctgtttcctgctgcAGAGGCCGCCCACCAAGGAAGCTACAGCTGTGTTTATCACCTCTATGTTTTCTCTCATAACTTCTCCTCTGAGAGCCGTGTGCTCTCTCTCAGCGTCATGGACCTGCTGCTTCAGCCCAACctctctgtgtcctcctccATGGTCGGGGTCTCCGAGGAGGACCAGCAGGAGGTGTTCCAGGTGTTCTGGGGCTCCAACTTCACCATCAGCTGCTCCATCCAGCCACAGTACCCAGGAGGCTCCTTCCAGCTCACCTTCACCTCCTCCAACTCAACAAACAACTACACCCAGCCAGCTGTCAATCACTctgcccacttcctgtttcctgctgcAGAGCCCGCCCACCAAGGAAGCTACAGCTGTGTTTATCACCTCTATGTTTTCTCTCATAACTTCTCCTCTGAGAGCCGTGTGCTCTCTCTCAGCGTCATGGATCCGAGGCCTTTAATCATCAGAGCGATCCTCCTGCCGCTGATTCTGCTGGTGGAGAACATTGTCCTTTACTTCTACTGTAGGGCCAGAAGAGGGCAGCTGCCGTGCAGACAGGAGAACATTGAGCCGGATTATTATAACCTGGGTGTCCCTGCAGCTGAAGGAGGGCCGACTGAAGAGGAAGGAGCTCAGGGAGCAGAGTAGCACCTCCAAGGAGCTCATGGAGGTTAAGCATTCATGCACCTTTTTACCCCACTTGGAATAATTCCCATTTATTTACCCTGACAAAACTTAAATTAATTTTGATTGGCACATGCTGGGTACTTGTGTACAAAATCTTGGGGTCTCTTGGGGCCAGTCTGTGAGGaaatatgaatttaaaaaaagtacattttactgACAAGCATTATTCTTCCCAAATGTCTGGACCCTGTTTTAGGGACCCAGTAGGTGTCCTTAGGATGGACCCAGGACCACCATAATTGGGTCACATATTTATAGAAGACCTTGATTTGGAAAAGGTTCCAActcatttttcaatttttttattttcactgaaACCCCATGGTATTCCCAAAGCCCAATTagagggtaactactgtttcaACCTGGAGcctattttctatgtttttgtgtctaagtgactgatgggaacaaccatctttgacattggtccagtattaaccCTCCTAACCCCAAAACAggttaaaaaaagtgtgttttgttaaaagattgccaaaagaaaaaacacttacCCTAGAAAGTAGCTGAAAAAAACGTAGTTACTCTTTAAGGTACAACTGGGAAGAGTGGTCGACAACCTTAAAATAGCTTCTGCACTCGCCCATTATTAGTATCCACCCAGCCAAACTTTCCCATGCGGCCATCTCAATTTCTTCGGTTTTTCCAGCAAGTCATAAGAAAAGAGTCTTGAATGTCATTGAGTATCacagcccttccagatggttctctcctcAAGACTAAAGTTATCTGCATGTACTGTTGATGTGATCTGAGTTACCACCGGATTATGCAAAGTTGCAATCACCACTTGAGctttaaaaacttgaaaaatatcccttttaaagtacatttagaacagattaAAAATGTGCCATTTGCGTTATATCACAAGTCAACTACAGACAATCATATAATAAATCACAATCAGATGTTTTCGTGTTGACATccctaattaaaataaatggaaaaaacattgacaaaaactcaaaattctTTGATTACGATTTTATCGTGAAACACCAGAAAACGTTCCAGGTTGGTGAACAACATCTGGTGCCATGTTGA
>XM_039802463.1
TCCTGTATGCAGATCCAACCTGAGGACAGCACATGTGAGGatcagagcagagagcagacagaCGGGAAGACGGACGCAGAGAGACCCTCCACCTGGACATGGACCacctgatgctgctgctgctgctgtggagcTCAGGACTCCAGGCTGAAGGAGAACTCAACTCAACAgAGTCTGTCAGGTTGGTGGGAAGAGACAGTCGCTGTAGAGGAACACTGGAGCTGAAACATGAAGGAGAATGGAGACCATTGGGCTACCCTGTCTGGACCCTGAAGACAGCAGCTGCTGCCTGCAGAGAGTCAGACTGTGGCTCTGCTGTTTCtttagaagagagagaagagtccTCAGACAGATCTGTGTGGAGGATCAGCTCTGTCTGTGTTGAGTCTGGATCTGCTCTGAGGGAGTGTGCTGCATCAGGTTCCTCTGTCATTCATCTCACCTGTTCAGACTCTGTCAGGCTGGTGAATGGGACCAGTCTGTGCTCAGGCAGACTGGAGGTGAAGACTAACCAGTCTACCCAGTGctggtcctcagtgtgtgaagatGATTTTGACCAGCAGGATGCAGAGGTGGTCTGTAGGGAGCTTGGCTGTGGGCCTCCTTCAGTCCTCCAGGGGGCGCTCTATGGAGAAGTGGAGCCTCCAATGAGGACCAAAGAGTTCCAGTGTGGAGGCCATGAGTCTGCTCTCCTGGACTGTAGCAGCTCAGGCTCAGATAGAAACACCTGCTCACCTGGAAAAGCTGTTGgactcacctgctcagAGTCTGTCAGGTTGGTGGGAGGAGACAGTCGCTGTAGAGGATCACTGGAGGTGAAACAAGGagaatggagaccagtgaatggCTGGTACTCTGACTGGACCCTGAAGACAGCAGCTGCTGCCTGCAGAGAGTCAGACTGTGGCTCTGCTGTTTCTGTAGTAAAGAGAGAAGAGTCCTCAGACAGATCTGTGTGGTGGATCAGGTCTGACTGTGCTGAGTCTGGATCTACTCTGAGGGAGTGTGCTGCATCATTTTACTCTTCCTCCATCCTTAATCTCACCTGTTCAGACTCTGTCAGGCTGGTGAATGGGACCAGTCTGTGCTCAGGCAGACTGGAGGTGAAGACTAACCAGTCTACCCAGCGctggtcctcagtgtgtgaagatGACTTTGACCAGCAGGATGCAGAGGTGGTCTGTAGGGAGCTTGGCTGTGGGGCTCCTTCAGTCCTCCAGGGGGCGCTCTATGGAGAAGTAGAGCCTCCAATGAGGACCAAAGAGTTCCAGTGTGGAGGCCATGAGTCTGCTCTCCTGGACTGTAGCAGCTCAGGCTCAGATAGAAACACCTGCTCACCTGGAAAAGCTGTTGgactcacctgctcagAGCCTGATGCTGTCAGGTTGGTGGGAGGAGTCAGTCGCTGTAGAGGATCACTGGAGGTGAAACAAGGAGAATGGAGACCAGTGGATGGCTATAACTCTGAGTGGACCCTGAAGAGAGCAGCTGCTGCCTGCAGAGAGTTAGACTGTGGCTCTGCGGTTTCTGTAGAGAGAGAAGAGTCCTCATACAGATCTATGTGGAGGATCTGGTCTGACTGTGTTGAGTCTGGATCTACTCTGAGGGAGTGTGCTGCGTCAGATTCCTCTTCCTCCGTCCTTCATCTCACCTGTTCAGGCCTGCTGCTTCAGCCCAACATCTCTGTGTCCTCCACCATGGTTGGGGTCTCCGAGGAGGACCAGCAGGAGGTGTTCCAGGTGTTCTGGGGCTCCACCTTCACCATCAGCTGCTCCATCCAGCCACAGTACCCAGGAGGCTCCTTCCAGCTCACCTTCACCTCCTCCAACTCAGCACACAACTACACCCAGCCAGCTGTCAATCACTctgcccacttcctgtttcctgctgcAGAGGCCGCCCACCAAGGAAGCTACAGCTGTGTTTATCACCTCTATGTTTTCTCTCATAACTTCTCCTCTGAGAGCCGTGTGCTCTCTCTCAGCGTCATGGATCCGAAGCCTTTAATCATCAGAGCGATCCTCCTGCCACTGATTCTGCTGGTGGAGAACATTGTCCTTTACTTCTACTGTAGGGCCAGAAGGGGGCAGCTGCCGTGCAGACAGAAGAACATTGAGCCGGATTATTATAACCTGGGTGTCCCTGCAGCTGAAGGAGGGCCGACTGAAGAGGAAGGAGCTCAGGAAGCAGAGTAGCACCTCCAAGGAGCTCATGGAGGTTAAGCATTTATACACCTTTTTACCCCAACTTGGAATTATTCCCATTTATTTACCCTTACAAAACTTCAATTCATTTAGATTGGCACATGCTGGGTACTTGTGTACAAAATCTGGAGTCTCTGGGTCCAATCTGAGAGGAAATATGaattttaaaaaatacattttactgaCAAGCATTATTCTTCCCATATGTCCAGACCCTGTTTTAGGGACCCAGTAGGGGTCCTTAGGATGGACCCAGGACCACCAGAATTGGGTCACATTCTACAGAACTCCTTGATTTGGAAAGGTTCCAactcatttttaaatttttttattttcactgaaACCCCCTGGTATTCCCAAAATTGTTAAAGAGCTTTGCCATTCACAAGCACAATTAGAGGGTAACTACcatttcaacctggaccctattttactatgtttttgtgtctaagtgacagaTGGGAACAACCATCTTTGACACTGGTCCTGTATTAACCCTCCTAACCCCAAAACGGTTTTGTTAAAAGATTGCCAAAGAAAAACCACTTACCCTACAAAGTAGCTGAAAAAGCAGTAGTTACCCTTCAAGGTACAACTGGGAAGTGTGGTCGACAACCTTAAAATAGCTTCCGCACTCGCCCATTTTTAGTATCCACCCAGGCCAAACTTTCCCATGCGGCCATCTCAATTTCTTTGGTTTTTCCAGCAAGTCATAACTGGGATAAAGAAAAGAGTCTTTTGAATGTCGTTGAGTTTCacagcccttccagatggttctctcctcAAGACTAAAGTTATCTGCATGTACTGTTGATGTGATCTGAGTTACCACCGGATTATGTTAAGTCACAAACACCACTTGAGctttaaaaacttgaaaaacatgccttttaaattacatttagaacagataaaaaatgtgCCATTTGCGTTAAATCACAAGTCAACTACAGACAATCatacaattaatcacaattagatGTTTTCGTGTTGACATccctaattaaaataaatggaaaaaaagaattgacaaaaactaaaaattctttgattagGATTTTATCGTGAAACACCAGAAAACGTTCCAGGTTGGTGAACAACATCTGGTGCTATGGTGACGATCTGTTGGTGTTTGGgattaaagaaatacaatgaaGGAATCAAAGTCATgtagctcacacacacagtacaatatTAAACATCAGAGGCTGTTTTCACACACATTTCATCTCATTTCATAAGAATGGTTTGTTTTTGTAGTTTAGGAATTTACTTATTGTGTAATGATGGATTTTTCTTACTTTTGTAATTAATGCTATTTCCTATTTCATGAAATCCAGTTCAGCCCAAAGATTCGAGACAAAAGCGAAACCGTTTAAGAACATTGAAGGAAATGTTGaagcggtctgaaccggcccgtctcagctcgactcaaaccagctgatggtgtcgctgtgactcagctggtggagtctccagaggctggtttataacataagagacgtctcctgtttcaacagccaatagagaagtcagctggtcaagTCAGCAACAAACTATAGAAACAAAATGATCcagaatccattttatttctatgttacaAGCTGTCAGCTGGTGAAATGTCAGAGTTTTAGACGGAGGCTCAACGAGCGCCGTGAGCACGGtatgtggtggagcgagctagagagagactgaagagagaagagcagcgttagaacaaagcagagaatcagagaaataaaacatagtTTTCTCTGTTTCATCTCTACTGGTAATGCAGCTGTAGCAAGTATCTCACTATCACTCTCCTCATTCATATCTTCAGATACTATAAAtaatatccagctacaaaacaCCAGAAAAGTCTGAAGTTAGAGCAGAAGTCCCGAGAGTGGTTTCTATGGAGATGATCCACGGTCTCGTCTCATTGGTggaaactggcagctttcagaacgctgcagaccggaGACTCTCAGGGAGACTAAAGTTTACTCTCATCTCGTCCtcaatctttggtctgaactggactttacaattgtttgttttaatatttcAGTAATTTACTTATTGTGTAATGATGgattttacttcttttttttaaataagtaaaaattattgttattttataacAATTGTGCTGATATTTGTTATCAGGATTTTGATTATTTCTGTAATTAGGCATTTTTTATTAATCATGTGCTTAAAGCAACATTGTATAACATTTGTATTCTTTGTAAGTTACACAGTGTGAGAACAGGTCATCAGATGAAGAGGGGAAATGACTGAAACAACTTTCTCCCTGTTGCAGTTAGATTTTTGATTAAGTAATAaattaaagagatattttgttgattttGAGTTAGGTCTGTGTCATGGCATTGTGTGCAGATGCAGACTGATGTCATGTAGTGGCGTATTAATGACAtgccaatttgtatgccatgattggcgtgttatcaagacgcatactcgcttatttgcatg

Function

GO:

id name namespace
GO:0090304 nucleic acid metabolic process biological_process

KEGG:

id description
ko03440 Homologous recombination
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802462.1 False 3637 mRNA 0.49 12 42322474 42420106
XM_039802463.1 True 4688 mRNA 0.45 10 42322588 42355354

Neighbor

gene id symbol gene type direction distance location
LOC120560192 NA coding upstream 81545 42218162 ~ 42240929 (+)
LOC120560233 LOC103473932 coding upstream 163526 42150631 ~ 42158948 (+)
LOC120560236 LOC103396904,LOC100693342,LOC103375480,LOC104933652,LOC104940903 coding upstream 175019 42140583 ~ 42147455 (+)
LOC120561109 NA coding upstream 251761 42053421 ~ 42070713 (+)
npc1l1 npc1l1 coding upstream 390278 41889339 ~ 41932196 (+)
LOC120561112 LOC101472590 coding downstream 5597 42425703 ~ 42435600 (+)
LOC120560205 NA coding downstream 30175 42450281 ~ 42490262 (+)
ccdc180 NA coding downstream 75179 42495285 ~ 42534878 (+)
LOC120560195 NA coding downstream 130167 42550273 ~ 42643061 (+)
LOC120560229 wdr5,LOC103397940,LOC107686885 coding downstream 224640 42644746 ~ 42655934 (+)
G68491 NA non-coding upstream 70867 42249911 ~ 42251607 (+)
G68260 NA non-coding upstream 110901 42189494 ~ 42211573 (+)
G68264 NA non-coding upstream 111670 42208679 ~ 42210804 (+)
G68263 NA non-coding upstream 144716 42175818 ~ 42177758 (+)
G68486 NA non-coding upstream 148508 42162738 ~ 42173966 (+)
G68512 NA non-coding downstream 115161 42535267 ~ 42536646 (+)
G68461 NA non-coding downstream 149406 42569512 ~ 42607617 (+)
G68537 NA non-coding downstream 223750 42643856 ~ 42644077 (+)
G68544 NA non-coding downstream 262188 42682294 ~ 42698899 (+)
G68555 NA non-coding downstream 295938 42716044 ~ 42786638 (+)
G68429 NA other upstream 316513 41909824 ~ 42005961 (+)
LOC120561105 NA other upstream 383416 41932563 ~ 41939058 (+)
aebp1b LOC104948491,LOC103367614 other upstream 529563 41720800 ~ 41792911 (+)
G68349 NA other upstream 917660 41366584 ~ 41404814 (+)
anxa1a anxa1,LOC103133394,LOC103146482 other upstream 1051625 41135777 ~ 41270849 (+)
G68598 NA other downstream 543934 42964040 ~ 43023819 (+)
LOC120561116 LOC101485158,LOC102302930,LOC100699693,LOC106633016 other downstream 556040 42976146 ~ 42998383 (+)
entr1 NA other downstream 605159 43025265 ~ 43038474 (+)
G68626 NA other downstream 612161 43032267 ~ 43162404 (+)
G69274 NA other downstream 830581 43250687 ~ 43251323 (+)

Expression


Co-expression Network