LOC120560236 (LOC103396904,LOC100693342,LOC103375480,LOC104933652,LOC104940903)


Basic Information

Item Value
gene id LOC120560236
gene name LOC103396904,LOC100693342,LOC103375480,LOC104933652,LOC104940903
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42140583 ~ 42147455 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802517.1
ACTTTCATGTGTTTCCTGATAGACAGTGGGGGGGTCAGCTGTTGCAGAAAGTTTCCACAGAGTTGTGGAGTTTgttttgtgagttttgtgtttaATCTCTGCAGAAGGGAGCTAACTCCCTGCGCGTGCTTCCCCGCCCCCCCTGCCTGCCTCCCCGAGCCCCCTCCCGCGGCTCAGGACCCGGATTGTAACTTTATTTGTCTCGGACAAACTTTGGGAATGAGTTTGAACGAGCACTCACTGCAGGCGCTGTCATGGAGGAAGCTGTACCTGAGCCGGGCCAAGCTCAAAGCCACCAGCCGAACTTCGGCGCTGCTTTCCGGCTTCGCGATGGTTGCCATGGTGGAGGTGCAGCTGGAGCGTGACCACGACTACCCCCCCGGGCTGCTGATTGCCTTCAGCGCGTGCACCACGGTGCTGGTGGCCGTGCACCTGTTCGCCCTGATGGTCAGCACCTGCATCCTGCCCAACCTGGAGGCCGTCAGCAACGTGCACAACCTCAACTCCGTGCACGAGTCTCCGCACGAGCGCATGCACCGCCACATCGAGCTGGCCTGGGCCTTCTCCACGGTGATCGGCACGCTGCTCTTCCTCACagaggtgatGCTGCTCTGCTGGGTGAAGTTCTTACCGCTGCGGAGCAGCAAGGATGGGAACAACACCATCAGCTCTGGCGAGGCGGCCGCCATCGCCTCCACCTGCATCATGGTGCCGTTCGGCCTCGTCTTCATCGTGTTCGCCATCCACTTCTACCGCACGCTCGTCAGCCACAAAACAGACCGGCAGATCCGCGAGCTGGAGCAGGTGATCCAGCTCCAGAACCAGCTGGACCACCGGCCGGAGAACGAGGACCTGAAGCCACCCATCCACTTTGCTTAATCTGCACACGCTCTTATTCTGAAAAACTtcattttctgtgtgtatgaacTAGGCAAACACGCCAAAAAAAGGCTACAAAAACGCAGGAGAAAGcgacaaaaatgcaaaaaaatgacGATAAAAAGATGTCAACATTTTTTATGCATATGAACTGTGcaaagatgctttttttttttttgataatgcATGTCCACACTTGTATCTTAGAAAATAGTTTTATTGTGAAATCTCTTCTAAAGGCTTAATTTTTTATGCTTATGAACTAGGCAAACACGCCAAGAAAAGGTTACAAAAACGCAAAACATGACGTTAGAAAGATGTCAAAATTTTGTATGCATCTGAACTGTGCAAAGATGTTTTGTTTTGATAATGCACGTCCACACACTTGAGAACTAGgcaaacacaccaaaaaaaggTTACAAAAAGGCTGGAGaaagtgggaaaaaaagggaCTTAAAGTCAACATTTCTTTATGCTCATGAACTGTGCAAagatgctttttgttttgataatgCATGTCCACATATAGTTTTACCTTTTAACTTGACATTCAGcgaggacttttattgtgaaatctCTTCTataagctttattttttttatgcttatgAACTCTCCAAACACCCCGAAAAAAGTTCCAAAAACACAGAACAAAGTGACACAAACGCTACAAAATAGCGAAGAAACTTTGCAAAGatgctttttttgggggggataaTGCGTGTCCATAAACTTGTATATCTTATAATATTCTAAAGAAAAGAGACGGAGGGACAGAGGAAAcagttcagagcttgtgtttggtgttttcagtctttcttgtggcagagatagaggcaatggtctttcctgtttcctgtttcctgtacgggactctcacaccgcctcaaaacacCCCCACAAGTCTGATCTCTGTCACAGTTTTTCCAAAAGTTGAGTCAGTCTCAACTTAGCAGCAGGTTTTTAGACTTGATTTAGAGAGAGTGAGTTGTACAGTAGCCTCCAGGCATATAGACTCAgaatccacaacacaaacacggaaccagacatctacagcacgatttatcacacacacacataacacacacacatcagtacatagaatacaataaaaaggaGTATGTTGCACCTCTCTAAAAGGCCTaatgtcataaataaataaatgaaactacaGCACGGTACTTAA

Function

NR:

description
PREDICTED: calcium release-activated calcium channel protein 1-like isoform X1

GO: NA

KEGG:

id description
K16056 ORAI1; calcium release-activated calcium channel protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802517.1 True 2064 mRNA 0.47 3 42140583 42147455

Neighbor

gene id symbol gene type direction distance location
LOC120561109 NA coding upstream 69870 42053421 ~ 42070713 (+)
npc1l1 npc1l1 coding upstream 208387 41889339 ~ 41932196 (+)
LOC120560218 NA coding upstream 429377 41707504 ~ 41711206 (+)
LOC120560215 NA coding upstream 438083 41699362 ~ 41702500 (+)
LOC120560214 NA coding upstream 485933 41641330 ~ 41654650 (+)
LOC120560233 LOC103473932 coding downstream 3176 42150631 ~ 42158948 (+)
LOC120560192 NA coding downstream 70707 42218162 ~ 42240929 (+)
LOC120560201 NA coding downstream 175019 42322474 ~ 42420106 (+)
LOC120560243 NA coding downstream 226679 42374134 ~ 42411976 (+)
LOC120561112 LOC101472590 coding downstream 278248 42425703 ~ 42435600 (+)
G68451 NA non-coding upstream 519 42039864 ~ 42140064 (+)
G68479 NA non-coding upstream 11514 42121769 ~ 42129069 (+)
G68475 NA non-coding upstream 23462 42115313 ~ 42117121 (+)
G68473 NA non-coding upstream 26699 42112891 ~ 42113884 (+)
G68472 NA non-coding upstream 28319 42107709 ~ 42112264 (+)
G68486 NA non-coding downstream 15283 42162738 ~ 42173966 (+)
G68263 NA non-coding downstream 28363 42175818 ~ 42177758 (+)
G68260 NA non-coding downstream 42039 42189494 ~ 42211573 (+)
G68264 NA non-coding downstream 61224 42208679 ~ 42210804 (+)
G68491 NA non-coding downstream 102456 42249911 ~ 42251607 (+)
G68429 NA other upstream 134622 41909824 ~ 42005961 (+)
LOC120561105 NA other upstream 201525 41932563 ~ 41939058 (+)
aebp1b LOC104948491,LOC103367614 other upstream 347672 41720800 ~ 41792911 (+)
G68349 NA other upstream 735769 41366584 ~ 41404814 (+)
anxa1a anxa1,LOC103133394,LOC103146482 other upstream 869734 41135777 ~ 41270849 (+)
G68504 NA other downstream 175018 42322473 ~ 42396643 (+)
G68598 NA other downstream 816585 42964040 ~ 43023819 (+)
LOC120561116 LOC101485158,LOC102302930,LOC100699693,LOC106633016 other downstream 828691 42976146 ~ 42998383 (+)
entr1 NA other downstream 877810 43025265 ~ 43038474 (+)
G68626 NA other downstream 884812 43032267 ~ 43162404 (+)

Expression


Co-expression Network