LOC120560218


Basic Information

Item Value
gene id LOC120560218
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41707504 ~ 41711206 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802491.1
GTGGTAGTCTACACCTGGTTCACATTTAATTAATTGACTCTTTGTCCTTTAAAGAGGGCTGGAGATTCAGTTCTGGTGATCTCTCTCAATCCTCACATCCagaaaagttCACAATGATGATGCGTGCAGCCGTGGGTCTCTGGGTCCTATCAGCGGTGATCTGCGTTAGCAGAGGCCATCACTATTTTGTTCACGGCAACGTCAAGACCGTCCAAGACGCTGTAGTTGACGACAGCACAGACAGCATCTCCTTGGTGAACAATGCAAACAAAGGGTTTTCCTTCAGACTCTACAGGAAGTTAGCAGCTCATGCTGACACACAGGGACAGAATATCTTCTTCTCCCCGTTTTGTGTGTCGACCGCTTTGGCTGCGTTGTCCGTGGGAGCGCAGGGGCAGACTTACCGTCAGCTTTTCAGTGGTCTGGGTTTCAAAAGCTCCCTCCTGACTCAGACAGATGTGGACCAGGCCTTCCAGGTGTTTCTCCAGAGGGCCAACAACACATCTCAGGAGGACTCCAGTGAAGGAACTGCCATGTTCGTGGCCAACCGCTTCAAGCCAAAACCAAAGTTCCTGCAGACCCTGAAGCGGTCATACTTTACAGATGGGTTCAATGTGGACTTCACCAAAGCAACAGAAAGTGCTGATACCATCAATAAGTACATGGAGGAGAAGACCAATGGGAAGATTGACAAGCTGGTGGAAGacctggatccaaacacagtcCTGTATCTCATCAGCTATATCTACTACAAAGGAAAGTGGGCGATTCCGTTTGACCCTGAGCTCACTGAGCAGGATGACTTCAACGTGGACAAGAACACAAAGGTTCCAGTCCTCATGATGAATTTGGAGTATAGTTTCTACACCTATCATGACGACAAGCTGAAGACAACAGTCCTTCAGCTCCTCTTCAACAGCTCCTACTCCATGCTGCTGATGTTGCCTGACGTCATGGCAACACTGGAGAACGCCATCTGCCCGAACCTCGTCACCAAATGGTTGAAGGCTATGAGACCCAGGagatataatttatatattccAAAGTTCTCCATCGAGACTTCCTACAACCTGAACGATGTGCTGTCAGAAATGGGAATGACGGGCATGTTTCATGGTGGTGCAAATTTGAGAGGCATTTCAGAAAGGCAAGGACTGGCAGTCTCAAATGTTGTGCACCAAGCTACGCTGGACGTGGACGAGACCGGAGCCACCGCTTCAGCTGCCACAGGCCTCGGCATCGAAAGGTTGGCGGTCATCCAGGTCTCTGTGTTGAAGTTCAATCGTCCATTCATGGTAATCATTGAACGCAACACAAAGGAAATCTTCTTCTTGGGAAAGATTATCAACCCAACCATCTGATGGATCATCACTTTGTTTGCTCGAGCACAGCTGTTCTCATACATATAAAGGAGTCAGGAAAaacttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802491.1 True 1428 mRNA 0.48 6 41707504 41711206

Neighbor

gene id symbol gene type direction distance location
LOC120560215 NA coding upstream 5004 41699362 ~ 41702500 (+)
LOC120560214 NA coding upstream 52854 41641330 ~ 41654650 (+)
LOC120560213 NA coding upstream 71615 41630736 ~ 41635889 (+)
LOC120560217 NA coding upstream 87852 41609932 ~ 41619652 (+)
lsm1 lsm1,LOC103396910,LOC103398031 coding upstream 101737 41598227 ~ 41605767 (+)
npc1l1 npc1l1 coding downstream 178133 41889339 ~ 41932196 (+)
LOC120561109 NA coding downstream 342215 42053421 ~ 42070713 (+)
LOC120560236 LOC103396904,LOC100693342,LOC103375480,LOC104933652,LOC104940903 coding downstream 429377 42140583 ~ 42147455 (+)
LOC120560233 LOC103473932 coding downstream 439425 42150631 ~ 42158948 (+)
LOC120560192 NA coding downstream 506956 42218162 ~ 42240929 (+)
G68387 NA non-coding upstream 62313 41564760 ~ 41645191 (+)
G68388 NA non-coding upstream 115637 41541203 ~ 41591867 (+)
G68374 NA non-coding upstream 154760 41481243 ~ 41552744 (+)
G68359 NA non-coding downstream 24294 41735500 ~ 41848568 (+)
G68409 NA non-coding downstream 32220 41743426 ~ 41744492 (+)
G68410 NA non-coding downstream 43052 41754258 ~ 41755612 (+)
G68411 NA non-coding downstream 55911 41767117 ~ 41805077 (+)
G68366 NA non-coding downstream 152569 41863775 ~ 41927919 (+)
G68349 NA other upstream 302690 41366584 ~ 41404814 (+)
anxa1a anxa1,LOC103133394,LOC103146482 other upstream 436655 41135777 ~ 41270849 (+)
LOC120561097 LOC106674743,LOC106674997,LOC102290162 other upstream 439985 41266647 ~ 41267519 (+)
LOC120561096 NA other upstream 609708 41081607 ~ 41097796 (+)
G68309 NA other upstream 636855 40983824 ~ 41070649 (+)
aebp1b LOC104948491,LOC103367614 other downstream 9594 41720800 ~ 41792911 (+)
G68429 NA other downstream 198618 41909824 ~ 42005961 (+)
LOC120561105 NA other downstream 221357 41932563 ~ 41939058 (+)
G68504 NA other downstream 611267 42322473 ~ 42396643 (+)
G68598 NA other downstream 1252834 42964040 ~ 43023819 (+)

Expression


Co-expression Network