G68388


Basic Information

Item Value
gene id G68388
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41541203 ~ 41591867 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU91410
agagagagagagacagagagagagagagagacagagagagagagagagacagagagagagagagagacagagagcgctcagagagagagacacagagagagcgctcagagagagagacacagagagagagacacagagagagagacacagagagagagacacagagagagagacacagagagaaagagactctCATTGTGTCCATGGAAGatctggaagaagaagaaaaaacaaaccaaaaaaaataacagcgTAGACTCAGCGCACCCCCAAACCGGTAAACCGGTCCCCGTTGTGGGGGTCCATCAGAAGGCTTTCCTCTCCAGCCGGTCCAGGATGGCCTGGATCTTCTGCACCGCGTCCTTCCGGGCCTGCCGGACGCTGTCCTGTCCCTGAGTCTCCACCGAGTCCAGCTCCAGCAGCTCTTTGGTCAGCAGCTCCTCCAGGTACCGGTAGCTCTTGTCCGTCTTTCTGCCGACAAACTCGTCCACGTCTTCCTGGAGCAGAAGCATCCTCGCCATGACCTGCTGGACCTTGGCCAGGCCCGGGTTATCGCTCAGCGGGGCCTGGGGCTGGGTCTGGGTCTGGGCCTGGGGCTGGGGCGAAGGACTGGGCTCACCTCGCccctgtttgttgttgttgtacagCTGCGGGGGCGAGCTTATTTCGGCAGGCTTTGCACTCGGGGGATTCAGCGAGGGGTTGGGCCGCGGTTTGGGTCCCGCCTGTGGAGCGCGCGGCTGCTGTTGTTCCTCCTTGGGCTGGTAGGGAGGCGGAGCCCCGGTTCCCGTCCCGGGCCATGCTGGGGGGTGCGCTGGACGGACGGGGTTCCCGTAGTGGTTCTGTGGAGGCTGCTGGCCGGGCGGCCACGGCTGCTGCGGGGGGGCGTAGGCGCCAGAGTGCGCCCACGCGTCGGCCTGGGGGTTTGGGTGGAGAGGCTGGCCGGGGGGGTACGGGGGGCTCGCGTGGCCCCCTTCGCTGTAGTGAGGGTACGCACCGGGAGGATATCCAGGAGCC
>TU91411
agagacagagagagagagagagacagagagagagagagagacagagagagagagagagacagagagcgctcagagagagagacacagagagagcgctcagagagagagacacagagagagagacacagagagagagacacagagagagagacacagagagagagacacagagagaaagagactctCATTGTGTCCATGGAAGatctggaagaagaagaaaaaacaaaccaaaaaaaataacagcgTAGACTCAGCGCACCCCCAAACCGGTAAACCGGTCCCCGTTGTGGGGGTCCATCAGAAGGCTTTCCTCTCCAGCCGGTCCAGGATGGCCTGGATCTTCTGCACCGCGTCCTTCCGGGCCTGCCGGACGCTGTCCTGTCCCTGAGTCTCCACCGAGTCCAGCTCCAGCAGCTCTTTGGTCAGCAGCTCCTCCAGGTACCGGTAGCTCTTGTCCGTCTTTCTGCCGACAAACTCGTCCACGTCTTCCTGGAGCAGAAGCATCCTCGCCATGACCTGCTGGACCTTGGCCAGGCCCGGGTTATCGCTCAGCGGGGCCTGGGGCTGGGTCTGGGTCTGGGCCTGGGGCTGGGGCGAAGGACTGGGCTCACCTCGCccctgtttgttgttgttgtacagCTGCGGGGGCGAGCTTATTTCGGCAGGCTTTGCACTCGGGGGATTCAGCGAGGGGTTGGGCCGCGGTTTGGGTCCCGCCTGTGGAGCGCGCGGCTGCTGTTGTTCCTCCTTGGGCTGGTAGGGAGGCGGAGCCCCGGTTCCCGTCCCGGGCCATGCTGGGGGGTGCGCTGGACGGACGGGGTTCCCGTAGTGGTTCTGTGGAGGCTGCTGGCCGGGCGGCCACGGCTGCTGCGGGGGGGCGTAGGCGCCAGAGTGCGCCCACGCGTCGGCCTGGGGGTTTGGGTGGAGAGGCTGGCCGGGGGGGTACGGGGGGCTCGCGTGGCCCCCTTCGCTGTAGTGAGGGTACGCACCGGGAGGATATCCAGGAGCC
>TU91412
agagacagagagagagagagagacagagagagagagagagacagagagagagagagagacagagagcgctcagagagagagacacagagagagcgctcagagagagagacacagagagagagacacagagagagagacacagagagagagacacagagagagagacacagagagaaagagactctCATTGTGTCCATGGAAGatctggaagaagaagaaaaaacaaaccaaaaaaaataacagcgTAGACTCAGCGCACCCCCAAACCGGTAAACCGGTCCCCGTTGTGGGGGTCCATCAGAAGGCTTTCCTCTCCAGCCGGTCCAGGATGGCCTGGATCTTCTGCACCGCGTCCTTCCGGGCCTGCCGGACGCTGTCCTGTCCCTGAGTCTCCACCGAGTCCAGCTCCAGCAGCTCTTTGGTCAGCAGCTCCTCCAGGTACCGGTAGCTCTTGTCCGTCTTTCTGCCGACAAACTCGTCCACGTCTTCCTGGAGCAGAAGCATCCTCGCCATGACCTGCTGGACCTTGGCCAGGCCCGGGTTATCGCTCAGCGGGGCCTGGGGCTGGGTCTGGGTCTGGGCCTGGGGCTGGGGCGAAGGACTGGGCTCACCTCGCccctgtttgttgttgttgtacagCTGCGGGGGCGAGCTTATTTCGGCAGGCTTTGCACTCGGGGGATTCAGCGAGGGGTTGGGCCGCGGTTTGGGTCCCGCCTGTGGAGCGCGCGGCTGCTGTTGTTCCTACGGAAacggaaacacaacaacaacaacaaaaagatgtgTTTCAGTTGTTAGAAAAAGCGCTGCATGCACGGTATGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91410 True 1017 lncRNA 0.63 3 41541203 41591867
TU91411 False 1009 lncRNA 0.63 3 41588685 41591867
TU91412 False 824 lncRNA 0.57 2 41588685 41589656

Neighbor

gene id symbol gene type direction distance location
LOC120560189 LOC104961756,LOC103367624,LOC102788780 coding upstream 286581 41222702 ~ 41254622 (+)
rorb rorb coding upstream 470297 41016653 ~ 41070906 (+)
wu:fa19b12 NA coding upstream 657644 40878899 ~ 40883559 (+)
carnmt1 carnmt1 coding upstream 671228 40849730 ~ 40869975 (+)
LOC120560177 NA coding upstream 706658 40820609 ~ 40834545 (+)
lsm1 lsm1,LOC103396910,LOC103398031 coding downstream 6360 41598227 ~ 41605767 (+)
LOC120560217 NA coding downstream 18065 41609932 ~ 41619652 (+)
LOC120560213 NA coding downstream 38869 41630736 ~ 41635889 (+)
LOC120560214 NA coding downstream 49463 41641330 ~ 41654650 (+)
LOC120560215 NA coding downstream 107495 41699362 ~ 41702500 (+)
G68378 NA non-coding upstream 37285 41498577 ~ 41503918 (+)
G68379 NA non-coding upstream 40493 41500297 ~ 41500710 (+)
G68356 NA non-coding upstream 56399 41420939 ~ 41484804 (+)
G68340 NA non-coding upstream 326867 41213523 ~ 41214336 (+)
G68332 LOC102301842,LOC102206335,LOC101474785 non-coding upstream 399758 41132183 ~ 41141445 (+)
G68359 NA non-coding downstream 143633 41735500 ~ 41848568 (+)
G68409 NA non-coding downstream 151559 41743426 ~ 41744492 (+)
G68410 NA non-coding downstream 162391 41754258 ~ 41755612 (+)
G68411 NA non-coding downstream 175250 41767117 ~ 41805077 (+)
G68366 NA non-coding downstream 271908 41863775 ~ 41927919 (+)
G68349 NA other upstream 136389 41366584 ~ 41404814 (+)
anxa1a anxa1,LOC103133394,LOC103146482 other upstream 270354 41135777 ~ 41270849 (+)
LOC120561097 LOC106674743,LOC106674997,LOC102290162 other upstream 273684 41266647 ~ 41267519 (+)
LOC120561096 NA other upstream 443407 41081607 ~ 41097796 (+)
G68309 NA other upstream 470554 40983824 ~ 41070649 (+)
aebp1b LOC104948491,LOC103367614 other downstream 128933 41720800 ~ 41792911 (+)
G68429 NA other downstream 317957 41909824 ~ 42005961 (+)
LOC120561105 NA other downstream 340696 41932563 ~ 41939058 (+)
G68504 NA other downstream 730606 42322473 ~ 42396643 (+)
G68598 NA other downstream 1372173 42964040 ~ 43023819 (+)

Expression


Co-expression Network