LOC120560215


Basic Information

Item Value
gene id LOC120560215
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41699362 ~ 41702500 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802489.1
GGCAGGCGGAGGTGTGATTGTCTACACCTGGTTCACATTTGCTTGATTGACTGTTTGTCCTTTAAAGAGGGCTGGATATTCAGTTCTGGTGATCTCTCTCAATCCTCACATCCagaaaagTTCACAGTGATGATGCATGCAGCCGTGGGTCTCTGGGTCCTATCAGCGGTGATCTACGTGGGCAGAGGACATCACTATTTTGTTCACGGCAACGTCAAGACAGTCAAAGACGCTGTAGTTGACGACCGTACCGACAGCGTCGCCCTGGTGAACGAAGCAAACCAAGAATTTTCCTTCAGACTCTACAGGCAGTTAGCAGCTCATGCTGACTCACAGGGAGAGAATATCATCTTCTGCCCATTTTGTGTGTCAACCGCTTTGGCTGCGTTGTCAGTGGGAGCGCAGGGGGAGACGCACCGTCAGCTTTTCAGTGGTCTGGGCTTCAACAACTCCCTGGTGCAGAAAGAGGTGGACCAGGCCTTCCAGATGTTCCTCCAGAGGGCCAACAACCAATCTCAGGAGGACTCCAGTGAAGGGACTGCCATGTTCATGGACGACCGCTTCAAGCCCAAGCCGGAGTTCCTGCAGACCCTGAAGCAGTCTTACTTCACAGATGGGTTCAATGTGGATTTCAGCCAAACCACAGAAAGTGCTGATACCATTAATAAGTACATGGAGGAGAAGATGACCAATGGGAGGATTGACCAGTTGGTGGAAGacctggatccaaacacagtcATGTATCTCATCAGCTACATCTACTACAAAGGAAAGTGGGCAACTCAGTTTGACCCTGAGCTCACTGAGCAGGACGACTTCAACATGGACGAGAACACAAAGGTTCCAGTCTTCATGATGAATCTGGAGGATAGTTTCTACACCTATCACGACGACAAGCTGAAGACTACAGTCCTTCAGCTCCCCTTAAACAGCTCCTACTCCATGCTGCTGATGTTGCCTGAAGTCATGACAACGCTGGAGAACGCAATCAGCCTGGACAATGTCATCAAATGGTTGACAGCTATGAGACCCAGGagatataatttatatattccAAAGTTCTCAATCAAGACTTCCTACAAGCTAAACAACATGCTGTCAGAAATGGGAATGACGGACATGTTTCATGGTGGTGCAAATTTGAGAGGCATTTCAGAGAGGCAAGGACTGGCAGTCTCAAAAGTTGTACACCAAGCTACGCTAGACATGGACGAGACCGGAGCCGAAGCTGCAGCTGTCACAGGCATCAGCATTGGACTGACTGCCATACGGTTCCTTGTCCCTGTCCCTGTGTTTAAGTTCAGTTGTCCATTCATGGTCATCATCCTTGAACGCAACACAAAGGAAATCCTCTTCTTGGGCAAGATTATCAACCCAATCATCTGATGGATCATCACTTTGTTTTTGCTCAAGCACAGCTGTTGCATCTCATAAAGGAGTCAAAACTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802489.1 True 1449 mRNA 0.48 6 41699362 41702500

Neighbor

gene id symbol gene type direction distance location
LOC120560214 NA coding upstream 44712 41641330 ~ 41654650 (+)
LOC120560213 NA coding upstream 63473 41630736 ~ 41635889 (+)
LOC120560217 NA coding upstream 79710 41609932 ~ 41619652 (+)
lsm1 lsm1,LOC103396910,LOC103398031 coding upstream 93595 41598227 ~ 41605767 (+)
LOC120560189 LOC104961756,LOC103367624,LOC102788780 coding upstream 444740 41222702 ~ 41254622 (+)
LOC120560218 NA coding downstream 5004 41707504 ~ 41711206 (+)
npc1l1 npc1l1 coding downstream 186839 41889339 ~ 41932196 (+)
LOC120561109 NA coding downstream 350921 42053421 ~ 42070713 (+)
LOC120560236 LOC103396904,LOC100693342,LOC103375480,LOC104933652,LOC104940903 coding downstream 438083 42140583 ~ 42147455 (+)
LOC120560233 LOC103473932 coding downstream 448131 42150631 ~ 42158948 (+)
G68387 NA non-coding upstream 54171 41564760 ~ 41645191 (+)
G68388 NA non-coding upstream 107495 41541203 ~ 41591867 (+)
G68374 NA non-coding upstream 146618 41481243 ~ 41552744 (+)
G68358 NA non-coding upstream 149669 41432386 ~ 41549693 (+)
G68359 NA non-coding downstream 33000 41735500 ~ 41848568 (+)
G68409 NA non-coding downstream 40926 41743426 ~ 41744492 (+)
G68410 NA non-coding downstream 51758 41754258 ~ 41755612 (+)
G68411 NA non-coding downstream 64617 41767117 ~ 41805077 (+)
G68366 NA non-coding downstream 161275 41863775 ~ 41927919 (+)
G68349 NA other upstream 294548 41366584 ~ 41404814 (+)
anxa1a anxa1,LOC103133394,LOC103146482 other upstream 428513 41135777 ~ 41270849 (+)
LOC120561097 LOC106674743,LOC106674997,LOC102290162 other upstream 431843 41266647 ~ 41267519 (+)
LOC120561096 NA other upstream 601566 41081607 ~ 41097796 (+)
G68309 NA other upstream 628713 40983824 ~ 41070649 (+)
aebp1b LOC104948491,LOC103367614 other downstream 18300 41720800 ~ 41792911 (+)
G68429 NA other downstream 207324 41909824 ~ 42005961 (+)
LOC120561105 NA other downstream 230063 41932563 ~ 41939058 (+)
G68504 NA other downstream 619973 42322473 ~ 42396643 (+)
G68598 NA other downstream 1261540 42964040 ~ 43023819 (+)

Expression


Co-expression Network