LOC120560217


Basic Information

Item Value
gene id LOC120560217
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41609932 ~ 41619652 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802490.1
AACAAAGCTAAAGTACAGTTTCTCTGATTTATTCTTATAAAAAGGAGCATCTCTCTTCATCCTGTCAGTGCTTCTCTGTCTGCGCTTCAACCAGGAGAAGTTCACAATGATGATGCGTGCAGTCGTGGGTCTCTGGGTCCTATCAGCGGTGATCTGTGTGGGCAGAGGCCATCACCATTTGGGTCACGATGACGACAAGACCGTCCAAGACACTGTAGCGGACGGCAGCGCCAACAGCGTCTCCCTGGTGAACGAAGCAAACCAAGAGTTTTCCTTCCGACTCTACAGGCAGTTAGCAGCTCATGCTGACTCTCAGGGAAAGAATATCTTCTTCTCCCCGGCTAGTGTGTCGACTGCCTTGGCTGCGTTGTCCGTGGGAGCGCAGGGAGAGACGCACCGTCAGCTTTTCAGTGGTCTTGCTTTCAACAGCTCCCTCCTGACGCAGACAGATGTGGACCAGGCCTTCCAGAGGTTCCTCCAGAGGGCCAACAACACATCTCAGGAGGACGCCAGCGAAGGGACCGCCGTGTTCGTGGACAATGGCTTCAAGCCAAAGCCGGAGTTCCTGCAGACCCTGAAGCAGTCGTACTTCACAGATGGGTTCAGTGTGGACTTCAGCCAAGCCACAGAAAGTGCTGATACCATCAATAAGTACGTGGAGGAGAAGACCAACGGGAAGATTGACCAGCTGTTGGAAAgcctggatccaaacacagtcATGTGCCTCATCAGCTACATCTACTACAAAGGAAAGTGGGCGACTCAGTTTGACCCAAAGCTCACCAAGCAGGACGACTTCAACGTGGACGAGAACACCAAGGTTTCAGTCGACATGATGAATCTGGAGGATCGTCTCCACACGTATCACGACCGCGAGCTGAACACGATGGTCCTTCAGCTCCCCTTCAACAGCTCCTACTCCATGCTGCTGATGTTGCCTGACGTCATGGCAACACTGGAGAACGCCATTTCCCCGAACCACGTCACCAAATGGTTGAAGGCTATGACGAGACCCAGGAGACATGAAGTATATATTCCAAAGTTCTCCATCAAGACTTCCTACAAACTGAACGATGTGCTGTCAGAAATGGGAATGACAGACATGTTTGGTGGTCGTGCAAATTTGAGAGGCATTTCAGAGGAGCAAGGACTGGCAGTCTCAAAAGTTGTGCACAAAGCTACGCTGGACGTGGACGAGACCGGAGCCGAAGCTGCAGCTTCCACAGCCATCCTCATCGGACGGACGTCTGACCTCCCAGGCGATGTGTTGAAGTTCAATCGTCCATTCATGGTCATCATCACTGAACGTAACACAGAGAAAATCCTCTTCTTGGGCAAGATTATCAACCCAACCATCTGATGATCATCACTTTGTGTTTGCTCGAGCACAGCTGTTGCATCTCATATAAAGGAGTCAGAAAAActgtt

Function

GO:

id name namespace
GO:0005615 extracellular space cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802490.1 True 1428 mRNA 0.51 6 41609932 41619652

Neighbor

gene id symbol gene type direction distance location
lsm1 lsm1,LOC103396910,LOC103398031 coding upstream 4165 41598227 ~ 41605767 (+)
LOC120560189 LOC104961756,LOC103367624,LOC102788780 coding upstream 355310 41222702 ~ 41254622 (+)
rorb rorb coding upstream 539026 41016653 ~ 41070906 (+)
wu:fa19b12 NA coding upstream 726373 40878899 ~ 40883559 (+)
carnmt1 carnmt1 coding upstream 739957 40849730 ~ 40869975 (+)
LOC120560213 NA coding downstream 11084 41630736 ~ 41635889 (+)
LOC120560214 NA coding downstream 21678 41641330 ~ 41654650 (+)
LOC120560215 NA coding downstream 79710 41699362 ~ 41702500 (+)
LOC120560218 NA coding downstream 87852 41707504 ~ 41711206 (+)
npc1l1 npc1l1 coding downstream 269687 41889339 ~ 41932196 (+)
G68388 NA non-coding upstream 18065 41541203 ~ 41591867 (+)
G68374 NA non-coding upstream 57188 41481243 ~ 41552744 (+)
G68358 NA non-coding upstream 60239 41432386 ~ 41549693 (+)
G68359 NA non-coding downstream 115848 41735500 ~ 41848568 (+)
G68409 NA non-coding downstream 123774 41743426 ~ 41744492 (+)
G68410 NA non-coding downstream 134606 41754258 ~ 41755612 (+)
G68411 NA non-coding downstream 147465 41767117 ~ 41805077 (+)
G68366 NA non-coding downstream 244123 41863775 ~ 41927919 (+)
G68349 NA other upstream 205118 41366584 ~ 41404814 (+)
anxa1a anxa1,LOC103133394,LOC103146482 other upstream 339083 41135777 ~ 41270849 (+)
LOC120561097 LOC106674743,LOC106674997,LOC102290162 other upstream 342413 41266647 ~ 41267519 (+)
LOC120561096 NA other upstream 512136 41081607 ~ 41097796 (+)
G68309 NA other upstream 539283 40983824 ~ 41070649 (+)
aebp1b LOC104948491,LOC103367614 other downstream 101148 41720800 ~ 41792911 (+)
G68429 NA other downstream 290172 41909824 ~ 42005961 (+)
LOC120561105 NA other downstream 312911 41932563 ~ 41939058 (+)
G68504 NA other downstream 702821 42322473 ~ 42396643 (+)
G68598 NA other downstream 1344388 42964040 ~ 43023819 (+)

Expression


Co-expression Network