G68309


Basic Information

Item Value
gene id G68309
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 40983824 ~ 41070649 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU91237
agatattcaggttcctgtcacacacacacagacacacagagacacacacttacacacacacagtctcacacatacacacacacacagtcacacgcacacacacacagtcacacacacacagacacacagagacacacaaacacacacacacacacacacagacacacacacacacacacacacagacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcactctcataACAGCTG
>TU91238
cagacacacacacacacagacacacacacacacagacacagacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacagacagaaacacacacacacagacacacacacacacacagtcgcaaaacaacgcacgcacacagacacagacacagacacagagacacacacacacacacacacacagacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcactctcataACAGCTG
>TU91239
GTAATCTCTACTCTCTTCTTACGTAACGGTGGCTGTTAGtcagcacaaacacactctgaGGCGTGCAGGTTCTCTAACACTAACAGCGTTCTCAAACTCTATTTcctgcatcaagttatggtgcaaataTCTTTGGGGGACTGCGGAGATGTAAGCGATTTTAAAACAGGGACTTGTGTCCTgggacccccccccacacacacacacacacacagacacacacacacacacacacacagagacacacacacacacacacacacagacacacacagacacacacacacacacacacacacacacacacacacagataaacacacacacacagacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacagacacacacacacacacagacacagacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacagacacacacacacacacacacacacacacacacagacacacacagacacacacagacacacacagacacagacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacagacacacacacacagacacacacacagacacacacacacacagacacacacacacacacacacagagacacacacacacacacaca
>TU91242
cacacacacacacacagacacacagactcacacacacacacacacacacacacacacacacacacacagacacacacagacacacacacacagacacacacagacacacacagacacacacagacacagacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacagacacacacacacagacacacacacacacagacacaccaaacacacagaccaacacacacacacagacacacacacaaacacacacacacacacacacaaaacacacacacacagacacacacacaaacacacacacacacacacacacacaaaacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91237 False 281 lncRNA 0.48 2 41061839 41070649
TU91238 False 339 lncRNA 0.50 4 40983824 41070649
TU91239 True 780 TUCP 0.49 5 41024999 41038738
TU91242 False 364 lncRNA 0.49 3 40985136 41036618

Neighbor

gene id symbol gene type direction distance location
wu:fa19b12 NA coding upstream 100265 40878899 ~ 40883559 (+)
carnmt1 carnmt1 coding upstream 113849 40849730 ~ 40869975 (+)
LOC120560177 NA coding upstream 149279 40820609 ~ 40834545 (+)
tmc2b tmc1,LOC103356627 coding upstream 205779 40737947 ~ 40778045 (+)
tmc1 LOC104961758,LOC103356604,LOC106904573,LOC103470573 coding upstream 255003 40698916 ~ 40728821 (+)
LOC120560189 LOC104961756,LOC103367624,LOC102788780 coding downstream 152053 41222702 ~ 41254622 (+)
lsm1 lsm1,LOC103396910,LOC103398031 coding downstream 527578 41598227 ~ 41605767 (+)
LOC120560217 NA coding downstream 539283 41609932 ~ 41619652 (+)
LOC120560213 NA coding downstream 560087 41630736 ~ 41635889 (+)
LOC120560214 NA coding downstream 570681 41641330 ~ 41654650 (+)
G68148 NA non-coding upstream 26031 40557519 ~ 40957793 (+)
G68281 NA non-coding upstream 33235 40950198 ~ 40950589 (+)
G68302 NA non-coding upstream 37662 40907874 ~ 40946162 (+)
G68284 NA non-coding upstream 54475 40928462 ~ 40929349 (+)
LOC120560183 NA non-coding upstream 65905 40886649 ~ 40917919 (+)
G68332 LOC102301842,LOC102206335,LOC101474785 non-coding downstream 61534 41132183 ~ 41141445 (+)
G68340 NA non-coding downstream 142874 41213523 ~ 41214336 (+)
G68356 NA non-coding downstream 350290 41420939 ~ 41484804 (+)
G68358 NA non-coding downstream 361737 41432386 ~ 41549693 (+)
G68374 NA non-coding downstream 410594 41481243 ~ 41552744 (+)
trpm6 NA other upstream 33846 40891729 ~ 40949978 (+)
G68285 NA other upstream 86716 40867247 ~ 40897108 (+)
tmem230b tmem230,LOC101174675,LOC101077900,LOC105939206,LOC103146401,LOC102236919,LOC103356612,LOC107086812,LOC103399110,LOC103397697 other upstream 585701 40379395 ~ 40398123 (+)
G68173 NA other upstream 749233 40233473 ~ 40234591 (+)
vps33a vps33a other upstream 819399 40133766 ~ 40164425 (+)
LOC120561096 NA other downstream 10958 41081607 ~ 41097796 (+)
anxa1a anxa1,LOC103133394,LOC103146482 other downstream 65128 41135777 ~ 41270849 (+)
LOC120561097 LOC106674743,LOC106674997,LOC102290162 other downstream 195998 41266647 ~ 41267519 (+)
G68349 NA other downstream 295935 41366584 ~ 41404814 (+)
aebp1b LOC104948491,LOC103367614 other downstream 650151 41720800 ~ 41792911 (+)

Expression


Co-expression Network