G68148


Basic Information

Item Value
gene id G68148
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 40557519 ~ 40957793 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU91033
atctgagtctgtcagcggcaacaacagaacttttagtggacgctgactgatgctgaacatctgtcctgtagggttacatcaCAGCCCGGTTCACAgctgctggttacagcgttGTTACTCAACACTGGACCAGTGTAAAGATAgttgttcacatcagtcacttagacaccaataGATGGGAAACAGGTTGAAAAAGACACAACCTTTCTAAACAACAATATTTTCGGGGCATGGGTGAATGGGGATAAAAGCATGAGTTACTTTTCATCTGCGTTAGAAATATTTGGCATCACTGAACTTGGAGGgtttcagacattttaatttgctGAGAGACAATTATTTGTTATGTTTtaattagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagggagagtgtgtgtgttggagagggggagagagagggagagtgtgtgtgtgtgtgtgttagagagtgtgtgtgtgtgtgtgtgtgttagagagggagtgtgtgtgtgtgtgtgtgtgtgtgttagagagggagagtgtgtgtgtgtgtgttagagagggagagtgtgagtgtgtgtgttagagagggagagtgtgagtgtgtgtgtgtgttagagagggagagtgtgtgtgtgtctgtgtgtgtattagagagagtgtgtgtgtctgtgtgtattagagagggagtgtgtgtgtgtgtgtgttagagggagtgtgtgtgtgtgtgtgtgtgtgtgtgttagagagagtgtgtgtgttagagagattgtgtgtgtgtgtgtgtgtgtgtgtgtgttagagagagtgtgtgtgttagagagattgtgtgtgtgtgtgtgtgtgttagcagcACATGTTTACAAAACTACAGGAGCATGCCAGCATTAGATTTatggaaaaataataaataccaAGATTTAGATGTAACTTCTCATCTGTCTAACcgctatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggagaagtgTTTCCATGGCTGCCTGACCCTGACCTATGTTTATGAGTTGTGTTAATCCctcctttttaattttaatttcccCGTAAGGatggtttttcatttaaaagacAACTGTATGTATCCGTTTGAGTTTCTCCCCTGATTCTTAGTTGTATGCaaatttgtacaaaaaaaaacatgaaaaaacaacaaactgtgtTGATATTTATGTATTGCATATAATCTTGCTATCCAGCATTACGACAGAATAGTATCATGTAAATAAAACTGTACAGAGAGACAT
>TU91034
atctgagtctgtcagcggcaacaacagaacttttagtggacgctgactgatgctgaacatctgtcctgtagggttacatcaCAGCCCGGTTCACAgctgctggttacagcgttGTTACTCAACACTGGACCAGTGTAAAGATAgttgttcacatcagtcacttagacaccaataGATGGGAAACAGGTTGAAAAAGACACAACCTTTCTAAACAACAATATTTTCGGGGCATGGGTGAATGGGGATAAAAGCATGAGTTACTTTTCATCTGCGTTAGAAATATTTGGCATCACTGAACTTGGAGGgtttcagacattttaatttgctGAGAGACAATTATTTGTTATGTTTtaattagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagggagagtgtgtgtgttggagagggggagagagagggagagtgtgtgtgtgtgtgtgttagagagggagagtgtgtgtgtgtgtgttagagagggagagtgtgagtgtgtgtgttagagagggagagtgtgagtgtgtgtgtgtgttagagagggagagtgtgtgtgtgtctgtgtgtgtattagagagagtgtgtgtgtctgtgtgtattagagagggagtgtgtgtgtgtgtgtgttagagggaggaagtgtgtgtgtgtgtgtgtgtgtgtgtgttagagagagtgtgtgtgttagagagattgtgtgtgtgtgtgtgtgtgtgtgtgtgttagagagagtgtgtgtgttagagagattgtgtgtgtgtgtgtgtgtgttagcagcACATGTTTACAAAACTACAGGAGCATGCCAGCATTAGATTTatggaaaaataataaataccaAGATTTAGATGTAACTTCTCATCTGTCTAACcgctatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggagaagtgTTTCCATGGCTGCCTGACCCTGACCTATGTTTATGAGTTGTGTTAATCCctcctttttaattttaatttcccCGTAAGGatggtttttcatttaaaagacAACTGTATGTATCCGTTTGAGTTTCTCCCCTGATTCTTAGTTGTATGCaaatttgtacaaaaaaaaacatgaaaaaacaacaaactgtgtTGATATTTATGTATTGCATATAATCTTGCTATCCAGCATTACGACAGAATAGTATCATGTAAATAAAACTGTACAGAGAGACAT
>TU91035
atctgagtctgtcagcggcaacaacagaacttttagtggacgctgactgatgctgaacatctgtcctgtagggttacatcaCAGCCCGGTTCACAgctgctggttacagcgttGTTACTCAACACTGGACCAGTGTAAAGATAgttgttcacatcagtcacttagacaccaataGATGGGAAACAGGTTGAAAAAGACACAACCTTTCTAAACAACAATATTTTCGGGGCATGGGTGAATGGGGATAAAAGCATGAGTTACTTTTCATCTGCGTTAGAAATATTTGGCATCACTGAACTTGGAGGgtttcagacattttaatttgctGAGAGACAATTATTTGTTATGTTTtaattagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagggagagtgtgtgtgttggagagggggagagagagggagagtgtgtgtgtgtgtgtgttagagagggagagtgtgtgtgtgtgtgttagagagggagagtgtgagtgtgtgtgttagagagggagagtgtgagtgtgtgtgtgtgttagagagggagagtgtgtgtgtgtctgtgtgtgtattagagagagtgtgtgtgtctgtgtgtattagagagggagtgtgtgtgtgtgtgtgttagagggagattgtgtgtgtgtgtgtgtgtgtgtgtgtgttagagagagtgtgtgtgttagagagattgtgtgtgtgtgtgtgtgtgttagcagcACATGTTTACAAAACTACAGGAGCATGCCAGCATTAGATTTatggaaaaataataaataccaAGATTTAGATGTAACTTCTCATCTGTCTAACcgctatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggagaagtgTTTCCATGGCTGCCTGACCCTGACCTATGTTTATGAGTTGTGTTAATCCctcctttttaattttaatttcccCGTAAGGatggtttttcatttaaaagacAACTGTATGTATCCGTTTGAGTTTCTCCCCTGATTCTTAGTTGTATGCaaatttgtacaaaaaaaaacatgaaaaaacaacaaactgtgtTGATATTTATGTATTGCATATAATCTTGCTATCCAGCATTACGACAGAATAGTATCATGTAAATAAAACTGTACAGAGAGACAT
>TU91036
atctgagtctgtcagcggcaacaacagaacttttagtggacgctgactgatgctgaacatctgtcctgtagggttacatcaCAGCCCGGTTCACAgctgctggttacagcgttGTTACTCAACACTGGACCAGTGTAAAGATAgttgttcacatcagtcacttagacaccaataGATGGGAAACAGGTTGAAAAAGACACAACCTTTCTAAACAACAATATTTTCGGGGCATGGGTGAATGGGGATAAAAGCATGAGTTACTTTTCATCTGCGTTAGAAATATTTGGCATCACTGAACTTGGAGGgtttcagacattttaatttgctGAGAGACAATTATTTGTTATGTTTtaattagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagggagagtgtgtgtgttggagagggggagagagagggagagtgtgtgtgtgtgtgtgttagagagtgtgtgtgtgtgtgtgtgtgttagagagggagagtgtgtgtgtgtgtgttagagagggagagtgtgagtgtgtgtgttagagagggagagtgtgagtgtgtgtgtgtgttagagagggagagtgtgtgtgtgtctgtgtgtgtattagagagagtgtgtgtgtctgtgtgtattagagagggagtgtgtgtgtgtgtgtgttagagggaggaagtgtgtgtgtgtgtgtgtgtgtgagagagagtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91033 True 1277 lncRNA 0.42 3 40557519 40558922
TU91034 False 1217 lncRNA 0.42 3 40557519 40558922
TU91035 False 1161 lncRNA 0.41 3 40557519 40558922
TU91036 False 717 lncRNA 0.45 3 40557519 40957793

Neighbor

gene id symbol gene type direction distance location
zfand5a zfand5 coding upstream 1453 40534048 ~ 40556066 (+)
igsf9b NA coding upstream 51033 40400615 ~ 40506486 (+)
adra1aa adra1a,LOC100708890,LOC102294828,LOC101475209 coding upstream 351983 40193668 ~ 40205536 (+)
LOC120560406 NA coding upstream 701782 39843146 ~ 39855737 (+)
LOC120561457 NA coding upstream 1719944 38832087 ~ 38837575 (+)
rorb rorb coding downstream 58860 41016653 ~ 41070906 (+)
LOC120560189 LOC104961756,LOC103367624,LOC102788780 coding downstream 264909 41222702 ~ 41254622 (+)
lsm1 lsm1,LOC103396910,LOC103398031 coding downstream 640434 41598227 ~ 41605767 (+)
LOC120560217 NA coding downstream 652139 41609932 ~ 41619652 (+)
LOC120560213 NA coding downstream 672943 41630736 ~ 41635889 (+)
G68222 NA non-coding upstream 73406 40483677 ~ 40484113 (+)
G68217 NA non-coding upstream 91894 40463203 ~ 40465625 (+)
G68211 NA non-coding upstream 101472 40447645 ~ 40456047 (+)
G68214 NA non-coding upstream 102518 40454644 ~ 40455001 (+)
G68205 NA non-coding upstream 130886 40426157 ~ 40426633 (+)
G68323 NA non-coding downstream 78321 41036114 ~ 41043825 (+)
G68324 NA non-coding downstream 81789 41039582 ~ 41043179 (+)
G68325 NA non-coding downstream 83574 41041367 ~ 41041937 (+)
G68332 LOC102301842,LOC102206335,LOC101474785 non-coding downstream 174390 41132183 ~ 41141445 (+)
G68340 NA non-coding downstream 255730 41213523 ~ 41214336 (+)
tmem230b tmem230,LOC101174675,LOC101077900,LOC105939206,LOC103146401,LOC102236919,LOC103356612,LOC107086812,LOC103399110,LOC103397697 other upstream 159396 40379395 ~ 40398123 (+)
G68173 NA other upstream 322928 40233473 ~ 40234591 (+)
vps33a vps33a other upstream 393094 40133766 ~ 40164425 (+)
LOC120560010 sds other upstream 679023 39862463 ~ 39878496 (+)
G68023 NA other upstream 1096041 39410222 ~ 39461478 (+)
G68309 NA other downstream 26031 40983824 ~ 41070649 (+)
LOC120561096 NA other downstream 123814 41081607 ~ 41097796 (+)
anxa1a anxa1,LOC103133394,LOC103146482 other downstream 177984 41135777 ~ 41270849 (+)
LOC120561097 LOC106674743,LOC106674997,LOC102290162 other downstream 308854 41266647 ~ 41267519 (+)
G68349 NA other downstream 408791 41366584 ~ 41404814 (+)

Expression


Co-expression Network