G68023


Basic Information

Item Value
gene id G68023
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 39410222 ~ 39461478 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU90882
TTCCAGACAAAATTTATTTTGATACTTCGATACAATATGAAGACCTAAATGGCACAAGACAGGAAATCTCCGAACGAAAAGGCACAAAATATCATACATTCACTATCATGTCCCCTGAATTTCAAAAGCTgatcagaaacatttaaaagcgaGCAGTTCAGAAGTTAAACAGCTGTCGATTTCATAAATTAGGAGAATACTGTACAGTTTGCAGTTTGAGAGTACTTGCTCTCCCCCCGTATCGTTGTTGACGGATTGGTTTAAGCATTGATTGAGTTTGCTTCTCTCTTCAAACAGACAGCAGGAATCATTAAGATAGACTTGGAAACATTGATTACACTGAAGACCGATTGCTCTTTGAGACGTATGCAAACAAACAGAGACCAACTGCCTCATATactgggacaaaaaaataaatcaggctACCGCTTCTCATCACGGAGACTTTGAATTTTCCCCACAGAAAAGGATCTGGTTTGGTGAAAGGAAGTCAATAGTTTGGGGCAACAatatatgaaaagaaaaaagatgctCGTGTCGTATTGTTCACCTGAGAAGATTTTGTTGTTGCCTCAGAGAATTGCTTCCCACTTTTCCTATGTTACCAGCCTACACTTGTTGGGACTCATGTAAACATATCAGAAATCCATAGACACTCTTTGGACAAGCCGATAACCCATCACTGAGGAAGCGATCACATTCCCTCGTACAGTttacacacaataaaaacatcAGGAATCGTCGAACCCAGATCGTTCATTACATCGGTGTCTTGAAAGGAAACGATATGGAAAACAAACCAAACCCCAAATTCCTGTTGCACAATTTAAGACACTGACgcatagggatgcaccgaatccaggattcggctttggccgaatattgggctttttgtcgaggttctggtttctgctgaatcttagaattttttcccagggaaccgaaccctacgcttgcactaggTGCGCTACGCTGGTTGCCGTAGTGACGGCGCcattgattacgggaaggtgttgaCGTAGGTGGAgtgttcaatgcagtaggctgtgagaaagtggacatggatctggtgagcagaaaaagttgttgtttggcagtactttcagtcaaaagaaggccattcaagtccagctacatgttcaatctggtcaatgctgattggtctggtggtggcgaggaccctaaactatacacaacatggccgctgttacaacatttggtatgaaacatccgaaagaatacgagttgtgcacgaaggaatctccagacagcagccagaatgcagcaacttcaggtacagcaaaggaaggacagtccctgtttacttcattcatgtgtttactgggttcatggactgaggatgggaggacgAGTCAGTAttatcttaaccagtggattcggtattcggccgaaccccaaaaatccgGATACAGTGCATCCCTACTGAcgcatgacaaaaacaaaaagaacaagGATCAAATGAGGGAACCACTTGTactatataaaatatgtatttaacaCTTGTGATGATCATGATTCTGAGGCCTAAAGGGGAGAAAGTGCACTCAATAATATGGCATCTCCATCCAAACGGCTGATCTGAGTAAGGCTGCAAagattgattagttgtcaacttaaattaatcgccgactattttgataatagattaatcggtttgagtcatccGAAAGTAAAAAAATTCtcttgattccagcttcttatatgtgaatattttttagttTCTTAAATCCCATATGACCGTAAACTGACTATCTTGTGTGTGAGTTGTTGGACAAGATATATTGGGGTGTCATCTTGGGCTTGGGAAAACactgattgacatttttttaaccatttaaaaaaaggccaAACGGCTAATCGATCGGGAAAATAATTGACGATTCATCAACTATTCATGaatggttagttgcagccccagATCTGAGGCGAAGATGTAAACCTGCAGCACCAACAGCGGTGTAGTGTACAGGCCGGCCCCGCTGCTACTTACGTTTGCTTGATGAAGGAGTTTCACACATCGACACTTGTCAGGAAACAAAAGGTGGTCACACgtaagaagaaaataaagggGTAATCACAAACGGCTTTGCCTGTAAAGCTCCGCCTGCCATGATTTGGTCCTAACAAGTAGCAGGCCGATAGGCTTGTGCTCACGTTTAGGTGTCAGGAAAACTGCCAGTCAGAAACAAGGGAGGTAGCTAGAGCAATAGCTGGCAGCAGAGGTACGATAGGtattataatgataataataataacaacaacaatataatAGGTCCGGAGATTAAGGCAAGCAGCGTGTGGTGCTGGTGTAGACTTGTTGTTACGAATCTGTAAACACACCTAGAATAAAGAGAGAGGCCTTTTGGAAACCGTTTACCTCCGAGAACCGGAGGAGTGAGACAGGCCTCTGGGGTGAGCTGGGGTGAGCGCTGCGCTGCAGTTTAGCTTGTGACGGAGGCTGGAGGGGTGTAGCACCATCTGTGGCTGTTTTTCAGTGcagtttttctttcctctggGGACATCTGCTAGGGAGGTGAATGCTGCGTTGTAGATTATGTGTCAATGTCTTCAGAATagggagagtgtgtgagtgagtgagtgagtgagtgtgtgagaacaaaaaaagaaaaccagtgGGAGCTGTAAACACTTCCAAAGTAACATCTCTTAGCTGAACAAGCTTGCACAGATCTGCCCAGCTTGAGCTTTTAAGAGATCAGTCACCACAAAGGCAtccacacctgtgtgtgtgtgtgtgtgtgtgtgagaatgtgtgtgtgtgtgtgagaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagaatgaatTCACATGTTTATCGTCAACGTATATGCgtcatatgaatgtgtgtgtgtgtgggttctaTTAAAATCTGTGTGAGAGGGAGAGCGAATACCTGCACGGGCATGATTGTCAGTGTTAAAAAGATGCAGTGCTTTGGGTGGAGGATTGgcggggggagagggagggggggggggggattacaATGGGCCAAGACGCCAAGGGTGTTAGTAATCTCTTAATGGAGGCTGTGGCAGGAAGCAACATGAGTATGACAAGCAGACAGACTCATGCCGGGGAATGCAATCCACTGGGCCACAGTGTGTACGGTAAAGACCGAGCAGGAGACAAAGAGAAGCTAGACAGGGCATCGTCTTCAGAGGAATGTTttaggaggagaaaaaaaaaaaaagaaggaaaatctAAATACGACAGGAGGAAACGTTTGGTCCAACGCCTGCCTGCCACTGTGGAATCAGCCAATGAAGACTCTAGTGTAGGAGCTCCTGTTGGTATCTCTCCGGAAGCCTTGGTCATTGTGAAGAACATGATGCTGATAGCTGGCGTCTCTCTGCCCACGAGATCAAAAATAACCAAGAGTCTTATCAGCTGGGATCGGGTTGGTTTCTAGAAAAATCAATTCCTCGGTGTATTGAAACTCTATGATTGGGGTGCGAGTCAGGGATCTGCTCTATTGATTGCAGGTAGCAGAGTCCCCCACCTCCCCATGAATCAgttctggtaaaaaaaaaaaaaagaaaagaaatggcaCCAAAGGAGCCCTCAGAGCAGTCTCCACCGCTGCTGTCATGGTGGGAGTTTAAAAACTAAAGATTGGCCTTTTTTTATTCGTCTGCAGCACTGGTTCCTCGTACTTCTCCCCGTCTGCG
>TU90883
TTCCAGACAAAATTTATTTTGATACTTCGATACAATATGAAGACCTAAATGGCACAAGACAGGAAATCTCCGAACGAAAAGGCACAAAATATCATACATTCACTATCATGTCCCCTGAATTTCAAAAGCTgatcagaaacatttaaaagcgaGCAGTTCAGAAGTTAAACAGCTGTCGATTTCATAAATTAGGAGAATACTGTACAGTTTGCAGTTTGAGAGTACTTGCTCTCCCCCCGTATCGTTGTTGACGGATTGGTTTAAGCATTGATTGAGTTTGCTTCTCTCTTCAAACAGACAGCAGGAATCATTAAGATAGACTTGGAAACATTGATTACACTGAAGACCGATTGCTCTTTGAGACGTATGCAAACAAACAGAGACCAACTGCCTCATATactgggacaaaaaaataaatcaggctACCGCTTCTCATCACGGAGACTTTGAATTTTCCCCACAGAAAAGGATCTGGTTTGGTGAAAGGAAGTCAATAGTTTGGGGCAACAatatatgaaaagaaaaaagatgctCGTGTCGTATTGTTCACCTGAGAAGATTTTGTTGTTGCCTCAGAGAATTGCTTCCCACTTTTCCTATGTTACCAGCCTACACTTGTTGGGACTCATGTAAACATATCAGAAATCCATAGACACTCTTTGGACAAGCCGATAACCCATCACTGAGGAAGCGATCACATTCCCTCGTACAGTttacacacaataaaaacatcAGGAATCGTCGAACCCAGATCGTTCATTACATCGGTGTCTTGAAAGGAAACGATATGGAAAACAAACCAAACCCCAAATTCCTGTTGCACAATTTAAGACACTGACgcatagggatgcaccgaatccaggattcggctttggccgaatattgggctttttgtcgaggttctggtttctgctgaatcttagaattttttcccagggaaccgaaccctacgcttgcactaggTGCGCTACGCTGGTTGCCGTAGTGACGGCGCcattgattacgggaaggtgttgaCGTAGGTGGAgtgttcaatgcagtaggctgtgagaaagtggacatggatctggtgagcagaaaaagttgttgtttggcagtactttcagtcaaaagaaggccattcaagtccagctacatgttcaatctggtcaatgctgattggtctggtggtggcgaggaccctaaactatacacaacatggccgctgttacaacatttggtatgaaacatccgaaagaatacgagttgtgcacgaaggaatctccagacagcagccagaatgcagcaacttcaggtacagcaaaggaaggacagtccctgtttacttcattcatgtgtttactgggttcatggactgaggatgggaggacgAGTCAGTAttatcttaaccagtggattcggtattcggccgaaccccaaaaatccgGATACAGTGCATCCCTACTGAcgcatgacaaaaacaaaaagaacaagGATCAAATGAGGGAACCACTTGTactatataaaatatgtatttaacaCTTGTGATGATCATGATTCTGAGGCCTAAAGGGGAGAAAGTGCACTCAATAATATGGCATCTCCATCCAAACGGCTGATCTGAGTAAGGCTGCAAagattgattagttgtcaacttaaattaatcgccgactattttgataatagattaatcggtttgagtcatccGAAAGTAAAAAAATTCtcttgattccagcttcttatatgtgaatattttttagttTCTTAAATCCCATATGACCGTAAACTGACTATCTTGTGTGTGAGTTGTTGGACAAGATATATTGGGGTGTCATCTTGGGCTTGGGAAAACactgattgacatttttttaaccatttaaaaaaaggccaAACGGCTAATCGATCGGGAAAATAATTGACGATTCATCAACTATTCATGaatggttagttgcagccccagATCTGAGGCGAAGATGTAAACCTGCAGCACCAACAGCGGTGTAGTGTACAGGCCGGCCCCGCTGCTACTTACGTTTGCTTGATGAAGGAGTTTCACACATCGACACTTGTCAGGAAACAAAAGGTGGTCACACgtaagaagaaaataaagggGTAATCACAAACGGCTTTGCCTGTAAAGCTCCGCCTGCCATGATTTGGTCCTAACAAGTAGCAGGCCGATAGGCTTGTGCTCACGTTTAGGTGTCAGGAAAACTGCCAGTCAGAAACAAGGGAGGTAGCTAGAGCAATAGCTGGCAGCAGAGGTACGATAGGtattataatgataataataataacaacaacaatataatAGGTCCGGAGATTAAGGCAAGCAGCGTGTGGTGCTGGTGTAGACTTGTTGTTACGAATCTGTAAACACACCTAGAATAAAGAGAGAGGCCTTTTGGAAACCGTTTACCTCCGAGAACCGGAGGAGTGAGACAGGCCTCTGGGGTGAGCTGGGGTGAGCGCTGCGCTGCAGTTTAGCTTGTGACGGAGGCTGGAGGGGTGTAGCACCATCTGTGGCTGTTTTTCAGTGcagtttttctttcctctggGGACATCTGCTAGGGAGGTGAATGCTGCGTTGTAGATTATGTGTCAATGTCTTCAGAATagggagagtgtgtgagtgagtgagtgagtgagtgtgtgagaacaaaaaaagaaaaccagtgGGAGCTGTAAACACTTCCAAAGTAACATCTCTTAGCTGAACAAGCTTGCACAGATCTGCCCAGCTTGAGCTTTTAAGAGATCAGTCACCACAAAGGCAtccacacctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagaatgaatTCACATGTTTATCGTCAACGTATATGCgtcatatgaatgtgtgtgtgtgtgggttctaTTAAAATCTGTGTGAGAGGGAGAGCGAATACCTGCACGGGCATGATTGTCAGTGTTAAAAAGATGCAGTGCTTTGGGTGGAGGATTGgcggggggagagggagggggggggggggattacaATGGGCCAAGACGCCAAGGGTGTTAGTAATCTCTTAATGGAGGCTGTGGCAGGAAGCAACATGAGTATGACAAGCAGACAGACTCATGCCGGGGAATGCAATCCACTGGGCCACAGTGTGTACGGTAAAGACCGAGCAGGAGACAAAGAGAAGCTAGACAGGGCATCGTCTTCAGAGGAATGTTttaggaggagaaaaaaaaaaaaagaaggaaaatctAAATACGACAGGAGGAAACGTTTGGTCCAACGCCTGCCTGCCACTGTGGAATCAGCCAATGAAGACTCTAGTGTAGGAGCTCCTGTTGGTATCTCTCCGGAAGCCTTGGTCATTGTGAAGAACATGATGCTGATAGCTGGCGTCTCTCTGCCCACGAGATCAAAAATAACCAAGAGTCTTATCAGCTGGGATCGGGTTGGTTTCTAGAAAAATCAATTCCTCGGTGTATTGAAACTCTATGATTGGGGTGCGAGTCAGGGATCTGCTCTATTGATTGCAGGTAGCAGAGTCCCCCACCTCCCCATGAATCAgttctggtaaaaaaaaaaaaaagaaaagaaatggcaCCAAAGGAGCCCTCAGAGCAGTCTCCACCGCTGCTGTCATGGTGGGAGTTTAAAAACTAAAGATTGGCCTTTTTTTATTCGTCTGCAGCACTGGTTCCTCGTACTTCTCCCCGTCTGCG
>TU90884
CACAATCTGAAATGTTTTCCAGACAAAATTTATTTTGATACTTCGATACAATATGAAGACCTAAATGGCACAAGACAGGAAATCTCCGAACGAAAAGGCACAAAATATCATACATTCACTATCATGTCCCCTGAATTTCAAAAGCTgatcagaaacatttaaaagcgaGCAGTTCAGAAGTTAAACAGCTGTCGATTTCATAAATTAGGAGAATACTGTACAGTTTGCAGTTTGAGAGTACTTGCTCTCCCCCCGTATCGTTGTTGACGGATTGGTTTAAGCATTGATTGAGTTTGCTTCTCTCTTCAAACAGACAGCAGGAATCATTAAGATAGACTTGGAAACATTGATTACACTGAAGACCGATTGCTCTTTGAGACGTATGCAAACAAACAGAGACCAACTGCCTCATATactgggacaaaaaaataaatcaggctACCGCTTCTCATCACGGAGACTTTGAATTTTCCCCACAGAAAAGGATCTGGTTTGGTGAAAGGAAGTCAATAGTTTGGGGCAACAatatatgaaaagaaaaaagatgctCGTGTCGTATTGTTCACCTGAGAAGATTTTGTTGTTGCCTCAGAGAATTGCTTCCCACTTTTCCTATGTTACCAGCCTACACTTGTTGGGACTCATGTAAACATATCAGAAATCCATAGACACTCTTTGGACAAGCCGATAACCCATCACTGAGGAAGCGATCACATTCCCTCGTACAGTttacacacaataaaaacatcAGGAATCGTCGAACCCAGATCGTTCATTACATCGGTGTCTTGAAAGGAAACGATATGGAAAACAAACCAAACCCCAAATTCCTGTTGCACAATTTAAGACACTGACgcatagggatgcaccgaatccaggattcggctttggccgaatattgggctttttgtcgaggttctggtttctgctgaatcttagaattttttcccagggaaccgaaccctacgcttgcactaggTGCGCTACGCTGGTTGCCGTAGTGACGGCGCcattgattacgggaaggtgttgaCGTAGGTGGAgtgttcaatgcagtaggctgtgagaaagtggacatggatctggtgagcagaaaaagttgttgtttggcagtactttcagtcaaaagaaggccattcaagtccagctacatgttcaatctggtcaatgctgattggtctggtggtggcgaggaccctaaactatacacaacatggccgctgttacaacatttggtatgaaacatccgaaagaatacgagttgtgcacgaaggaatctccagacagcagccagaatgcagcaacttcaggtacagcaaaggaaggacagtccctgtttacttcattcatgtgtttactgggttcatggactgaggatgggaggacgAGTCAGTAttatcttaaccagtggattcggtattcggccgaaccccaaaaatccgGATACAGTGCATCCCTACTGAcgcatgacaaaaacaaaaagaacaagGATCAAATGAGGGAACCACTTGTactatataaaatatgtatttaacaCTTGTGATGATCATGATTCTGAGGCCTAAAGGGGAGAAAGTGCACTCAATAATATGGCATCTCCATCCAAACGGCTGATCTGAGTAAGGCTGCAAagattgattagttgtcaacttaaattaatcgccgactattttgataatagattaatcggtttgagtcatccGAAAGTAAAAAAATTCtcttgattccagcttcttatatgtgaatattttttagttTCTTAAATCCCATATGACCGTAAACTGACTATCTTGTGTGTGAGTTGTTGGACAAGATATATTGGGGTGTCATCTTGGGCTTGGGAAAACactgattgacatttttttaaccatttaaaaaaaggccaAACGGCTAATCGATCGGGAAAATAATTGACGATTCATCAACTATTCATGaatggttagttgcagccccagATCTGAGGCGAAGATGTAAACCTGCAGCACCAACAGCGGTGTAGTGTACAGGCCGGCCCCGCTGCTACTTACGTTTGCTTGATGAAGGAGTTTCACACATCGACACTTGTCAGGAAACAAAAGGTGGTCACACgtaagaagaaaataaagggGTAATCACAAACGGCTTTGCCTGTAAAGCTCCGCCTGCCATGATTTGGTCCTAACAAGTAGCAGGCCGATAGGCTTGTGCTCACGTTTAGGTGTCAGGAAAACTGCCAGTCAGAAACAAGGGAGGTAGCTAGAGCAATAGCTGGCAGCAGAGGTACGATAGGtattataatgataataataataacaacaacaatataatAGGTCCGGAGATTAAGGCAAGCAGCGTGTGGTGCTGGTGTAGACTTGTTGTTACGAATCTGTAAACACACCTAGAATAAAGAGAGAGGCCTTTTGGAAACCGTTTACCTCCGAGAACCGGAGGAGTGAGACAGGCCTCTGGGGTGAGCTGGGGTGAGCGCTGCGCTGCAGTTTAGCTTGTGACGGAGGCTGGAGGGGTGTAGCACCATCTGTGGCTGTTTTTCAGTGcagtttttctttcctctggGGACATCTGCTAGGGAGGTGAATGCTGCGTTGTAGATTATGTGTCAATGTCTTCAGAATagggagagtgtgtgagtgagtgagtgagtgagtgtgtgagaacaaaaaaagaaaaccagtgGGAGCTGTAAACACTTCCAAAGTAACATCTCTTAGCTGAACAAGCTTGCACAGATCTGCCCAGCTTGAGCTTTTAAGAGATCAGTCACCACAAAGGCAtccacacctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgag

Function

GO:

id name namespace
GO:0030684 preribosome cellular_component

KEGG:

id description
ko03013 Nucleocytoplasmic transport
ko03008 Ribosome biogenesis in eukaryotes

RNA

RNA id representative length rna type GC content exon number start site end site
TU90882 True 3716 TUCP 0.44 2 39410238 39413981
TU90883 False 3684 TUCP 0.44 2 39410238 39413981
TU90884 False 2819 lncRNA 0.43 2 39410222 39461478

Neighbor

gene id symbol gene type direction distance location
LOC120561457 NA coding upstream 572647 38832087 ~ 38837575 (+)
tgoln2 NA coding upstream 582437 38816729 ~ 38827785 (+)
tcf7l1b tcf7l1,LOC107082304 coding upstream 608506 38712285 ~ 38801716 (+)
si:dkey-31c13.1 NA coding upstream 823926 38579413 ~ 38586296 (+)
LOC120560325 phyhip,LOC102233080,LOC104946538,LOC100707279 coding upstream 864860 38527740 ~ 38545362 (+)
LOC120560406 NA coding downstream 381668 39843146 ~ 39855737 (+)
adra1aa adra1a,LOC100708890,LOC102294828,LOC101475209 coding downstream 732190 40193668 ~ 40205536 (+)
igsf9b NA coding downstream 939137 40400615 ~ 40506486 (+)
zfand5a zfand5 coding downstream 1072570 40534048 ~ 40556066 (+)
snrnp200 snrnp200 coding downstream 1104592 40566070 ~ 40642169 (+)
G68017 NA non-coding upstream 51351 39358662 ~ 39358871 (+)
G67991 NA non-coding upstream 280935 39128582 ~ 39129287 (+)
G67989 NA non-coding upstream 387085 39021683 ~ 39023137 (+)
G67985 NA non-coding upstream 469550 38940395 ~ 38940672 (+)
G67984 NA non-coding upstream 482285 38927661 ~ 38927937 (+)
G68038 NA non-coding downstream 8966 39470444 ~ 39471015 (+)
G68064 NA non-coding downstream 111344 39572822 ~ 39573769 (+)
LOC120560408 NA non-coding downstream 134675 39596153 ~ 39602921 (+)
G68069 NA non-coding downstream 136315 39597793 ~ 39598254 (+)
G68084 NA non-coding downstream 241616 39703094 ~ 39703442 (+)
G67824 NA other upstream 808401 38595811 ~ 38601821 (+)
nkx6.3 nkx6-3,LOC102787307,LOC104940825,LOC102218504 other upstream 1002699 38355603 ~ 38407523 (+)
si:ch211-214j8.12 NA other upstream 1086726 38309603 ~ 38323496 (+)
LOC120560165 LOC104964460,LOC103362321 other upstream 1681517 37717903 ~ 37728705 (+)
trpm3 trpm3,LOC103470491,LOC103145554,LOC106928040,LOC101476865,LOC100708457 other upstream 2917527 36241579 ~ 36492695 (+)
LOC120560010 sds other downstream 400985 39862463 ~ 39878496 (+)
vps33a vps33a other downstream 672288 40133766 ~ 40164425 (+)
G68173 NA other downstream 771995 40233473 ~ 40234591 (+)
tmem230b tmem230,LOC101174675,LOC101077900,LOC105939206,LOC103146401,LOC102236919,LOC103356612,LOC107086812,LOC103399110,LOC103397697 other downstream 917917 40379395 ~ 40398123 (+)
G68285 NA other downstream 1405769 40867247 ~ 40897108 (+)

Expression


Co-expression Network