si:dkey-31c13.1


Basic Information

Item Value
gene id si:dkey-31c13.1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 38579413 ~ 38586296 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802695.1
cccgCGAATTCTAAACACTAATGGCGACCGGTGGTTGTAAACGATTCCCCTCGAATGGCTGTTTTGATCAGAATCTTAAAGGTTTCGAGGAGGACACGATGACAAAGTTCGTCGTTTGGACAAAAGACAAGGCTTTTGGTGTAGACGACCCCAAACCAGGATCCAAAAAAATAATGTGGGAGCTGCAATATGTTCCTTTTGACGGGATCCCCTTCATGGTGGTGGGGAGGAGGGTCTACTCCTGTCACCAAGGGTTAGACAAGCATAAACATGATAAACAGACAAGACAACTACAACTGCTTGATGACCACTCGGACCATTGTTATAAAAAGAGGCGAAGTATTCTCAAAGACTCGAAGAAACTGGACTGCCCAGCCAGAATATATGTGGTTCATCTAATCAGATTCCCTGATTACAAGataccCGATGACATCCATAAACAGAGGAAGGAGTGCGCTGGGCGTCTGAGACGTGCCTTGGCAACAAACCCGTCTGAAGTGAAGTTTGAGGAGCAATATGTCGCATGCTTCCCAGGGATTGAGGAGCACAAGAACCATCCTGTGGTAAGAGAGGGGCCGGTGGACAGGAGTTCCACTTCTCCCAAAGACGGCAGCAAGACAAAGAAAAGGCAGAAGTGTGGGAGCTTGCTGCGCCAAATCTCCGCTCTCACTCCCCATCTACAGGAAGAGCCGTTCCTGGACTCGTTGATTGTTCGACTGAACGACCTTTTGGAGGATGTGAGGCGTCATTCCCCTAAAGATGACCCCCTTCCCCTGTCTGACACGCCTCCATCCAAAAAAGTTAGATACCTCAAATCGCTCAGCATGatcccccaaaaaagaaaaaactctgGAAGGTTTGGCCGCCCTGCTAAAGCAACGAAAAGTCAGCTTCAAGCTTTAAATGCAGATGTAATGTAGTTTTTAGCTTGTAGCACTGGgttgaatatttttgaaaacatcTGGCTGCGAAGAACTCTCGCACACAGAGGGTCCTAtcctgcacccggcgcagcgcaaagcccgacgcaagtgtctcttgctagtttaagaccgacgtagtggtcaattt
>XM_039802696.1
cccgCGAATTCTAAACACTAATGGCGACCGGTGGTTGTAAACGATTCCCCTCGAATGGCTGTTTTGATCAGAATCTTAAAGGTTTCGAGGAGGACACGATGACAAAGTTCGTCGTTTGGACAAAAGACAAGGCTTTTGGTGTAGACGACCCCAAACCAGGATCCAAAAAAATAATGTGGGAGCTGCAATATGTTCCTTTTGACGGGATCCCCTTCATGGTGGTGGGGAGGAGGGTCTACTCCTGTCACCAAGGGTTAGACAAGCATAAACATGATAAACAGACAAGACAACTACAACTGCTTGATGACCACTCGGACCATTGTTATAAAAAGAGGCGAAGTATTCTCAAAGACTCGAAGAAACTGGACTGCCCAGCCAGAATATATGTGGTTCATCTAATCAGATTCCCTGATTACAAGataccCGATGACATCCATAAACAGAGGAAGGAGTGCGCTGGGCGTCTGAGACGTGCCTTGGCAACAAACCCGTCTGAAGTGAAGTTTGAGGAGCAATATGTCGCATGCTTCCCAGGGATTGAGGAGCACAAGAACCATCCTGTGGGGCCGGTGGACAGGAGTTCCACTTCTCCCAAAGACGGCAGCAAGACAAAGAAAAGGCAGAAGTGTGGGAGCTTGCTGCGCCAAATCTCCGCTCTCACTCCCCATCTACAGGAAGAGCCGTTCCTGGACTCGTTGATTGTTCGACTGAACGACCTTTTGGAGGATGTGAGGCGTCATTCCCCTAAAGATGACCCCCTTCCCCTGTCTGACACGCCTCCATCCAAAAAAGTTAGATACCTCAAATCGCTCAGCATGatcccccaaaaaagaaaaaactctgGAAGGTTTGGCCGCCCTGCTAAAGCAACGAAAAGTCAGCTTCAAGCTTTAAATGCAGATGTAATGTAGTTTTTAGCTTGTAGCACTGGgttgaatatttttgaaaacatcTGGCTGCGAAGAACTCTCGCACACAGAGGGTCCTAtcctgcacccggcgcagcgcaaagcccgacgcaagtgtctcttgctagtttaagaccgacgtagtggtcaattt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802695.1 True 1071 mRNA 0.48 5 38579413 38586296
XM_039802696.1 False 1062 mRNA 0.48 5 38579413 38586296

Neighbor

gene id symbol gene type direction distance location
LOC120560325 phyhip,LOC102233080,LOC104946538,LOC100707279 coding upstream 34051 38527740 ~ 38545362 (+)
trnaf-gaa_6 NA coding upstream 147749 38431592 ~ 38431664 (+)
gda gda coding upstream 275447 38263367 ~ 38303966 (+)
c6h9orf85 csgr18h9orf85,clg9h9orf85,LOC105926787,LOC101078288,LOC103145608,LOC106963215,LOC102236857 coding upstream 321297 38248027 ~ 38258116 (+)
nkx3-1 NA coding upstream 501513 38075066 ~ 38077900 (+)
tcf7l1b tcf7l1,LOC107082304 coding downstream 125989 38712285 ~ 38801716 (+)
tgoln2 NA coding downstream 230433 38816729 ~ 38827785 (+)
LOC120561457 NA coding downstream 245791 38832087 ~ 38837575 (+)
LOC120560406 NA coding downstream 1256850 39843146 ~ 39855737 (+)
adra1aa adra1a,LOC100708890,LOC102294828,LOC101475209 coding downstream 1607372 40193668 ~ 40205536 (+)
G67766 NA non-coding upstream 65397 38422361 ~ 38514016 (+)
G67793 NA non-coding upstream 78742 38499850 ~ 38500671 (+)
G67764 NA non-coding upstream 109826 38414238 ~ 38469587 (+)
G67775 NA non-coding upstream 119602 38457593 ~ 38459811 (+)
G67765 NA non-coding upstream 148333 38417527 ~ 38431080 (+)
G67830 NA non-coding downstream 47475 38633771 ~ 38656197 (+)
G67836 dbnl non-coding downstream 54979 38641275 ~ 38657519 (+)
G67838 LOC104946535,LOC103470542,LOC101482088,LOC107393720,LOC101172587,LOC106915872 non-coding downstream 72308 38658604 ~ 38670657 (+)
G67844 NA non-coding downstream 104659 38690955 ~ 38795240 (+)
G67850 NA non-coding downstream 211415 38797711 ~ 38798346 (+)
nkx6.3 nkx6-3,LOC102787307,LOC104940825,LOC102218504 other upstream 171890 38355603 ~ 38407523 (+)
si:ch211-214j8.12 NA other upstream 255917 38309603 ~ 38323496 (+)
LOC120560165 LOC104964460,LOC103362321 other upstream 850708 37717903 ~ 37728705 (+)
trpm3 trpm3,LOC103470491,LOC103145554,LOC106928040,LOC101476865,LOC100708457 other upstream 2086718 36241579 ~ 36492695 (+)
G67824 NA other downstream 9515 38595811 ~ 38601821 (+)
G68023 NA other downstream 823926 39410222 ~ 39461478 (+)
LOC120560010 sds other downstream 1276167 39862463 ~ 39878496 (+)
vps33a vps33a other downstream 1547470 40133766 ~ 40164425 (+)
G68173 NA other downstream 1647177 40233473 ~ 40234591 (+)

Expression


Co-expression Network