LOC120560325 (phyhip,LOC102233080,LOC104946538,LOC100707279)


Basic Information

Item Value
gene id LOC120560325
gene name phyhip,LOC102233080,LOC104946538,LOC100707279
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 38527740 ~ 38545362 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802691.1
gaaagagcgagcgagcgagagacagagagagagagagagcggaaagagagagagagcgaaccAGACTGTAAGAGAGGAGCCTGTGTGCTGGTCTCAGCTCCTAATCAGCCTCCCTGGGGGATCTGTCATCGACTGCAGCAGACGATCTTCTCCCATCCCGGCCGTGGCTGCGATCTTCTCTCACTGCCTCACACAAATGACGGAAATGGACGCCCCTCTCGCCACCCCGTGCAATATCCAGATTTGCGAGGTGACCTGCGACTCCTTCCGCATCATGTGGGACATGAGCCCCGAGGACAGCGCCAGAGCCACGCACTTCTTCATCGACCTGAGCCGCAAAGAGAGCAGAGACCCCAACCGCTTCAAACACAGGGATGTGCCAACCAAGCTGGTGGCCAAGGCGGTGCCTCTCCCCATGGCGGTGAGGGGACACTGGTTCCTCAGCCCGCGGACAGAGTACTGCGTCGCTGTCCAGACGGCTGTCCGACAGCCAGACGGAGACTACCTGGTGTCGGAGTGGAGCCAGGTGGTGGAGTTCTGCACCGGGGACTACGCCATGGAACACCTACAGCAGCTCCTCGACAAGGCCACGGGCTCAGCAGTGAGGCTGCTGAAATTCTCTGTGTTTTATCGCAACCAGCACCCAGACTACTTCGACTATGTCAGAAGGGAATGCGGAGGCCTGATGCGTCCGGCCCTGAAAGACATCAGCGGGAGTCACGGCTCTCCGATCAACGGCAAACTGCAGGGCGTCTTCTTCAGCTGCAACACAGAGTTTGATACAGGCCTCCCTCCCCAGGACTCCCCCTACGGCCCGCTGCGTTTCCAGATCCCCGCTGGACACCTGCTGAACCCCAACATCTCGCTGTACTTCGCAGACTTCTACTGTATGTACACAGCGTACCACTACGTGGTGCTGGTGCTGGCTCCCGTGGGCTCAGAGGGAGATAACTTTTGTCGCACTCGGCTGCCAATGCTGGACTTGGCGTCCAACCCTTTCCTGACGTACACGGCGCCGCAGACACCGGGGGAGGAGCCTCTGTACTGCCACGCCAGCGACGTCATCCTGGAGGTGCTTTTCACAGAGCCGGTTCCTTTGGATCAGGGCGTCGTGGAGCCGATCCGCGGCCACCACCAGCTCATGAGCCTGACCACAGCCAACGCCAAGAAAGACCCGAGCTGCAAAGTGTGCAACATCAGCGTGGGACGCTGAGCGAGATGTAGGACGGACCGGACAAATACTGAAAGACAAAACATTGGAGAACgtgtgtagggggggggggcggcttctggggctccagccctaaatgtttttcttttttttttaaataacttcaaCTCTGTGTCATTtccactctgtctctctgattGGACCAAATCAATGCAGCAAAAGTTCTGTTACTGGGCAAATATATCGCTGTTCATTTTGTGAACTCTACTGTAAATTGGTTTCAAGATCAGTAGTgctgtttacaccaaattccTACCCTACCTACGTTATATAACCTAAAAAATAGTAACATCAGAcgagggctgcaactaacgattgttTTCATTATCGATGAAGATGTCGAATACGTTTGAAATGATATCGGATCCGATTCTGATAGTGAAACGAGTCATTTTGTGTGTCTGCAAATAACAAATATTGTCATTGTCAATTAATCcgtcgattattttctggattagggttagaggagagaagaaactacaaAATGTTCCCTTTTAACAAACTGGAATCTGAGAATttgtagtctttttttaaaggaaaaagtGCGATTAATCGATTAGCAAAATAGTTTGTCGATTAATTCAATAATTGACAAACTGATTAATCCTTCCGCTCTACAACCTCAACATTAGTTGTGTGACAGTTAGATATAAAACAGGATGTCGGCTCTACAGGATGATTCTTTTCCTCAGCAACTATCGTGTTTTCCCTACATGATGTAcagatttttaggcattttaTTATGAAATGGCTTGAAAAAAGAATTGTGCAAATAGCTGCCGTAAATGGAGCATGCCCCCGGAACCCCCCCCTTAGATTTTGGGCTAAGCCCCGAATGTATATATCTGTCTCCACCCCTGCTTTAGGACACCGTGGAAACAGCCCACCTCTCGGTGCATGCATGCTGCTGCCCCTCTTCCTGCCCCCTGCCTGAAATAGAATAGTGAGTATTAAATAGAAGATTAACAATGCGTATCGCAGAACTGCATCATGTTCACAGCTGGAAACACTATACATCCGTAACGGCTGAACAAAACATAATTAAAGACATGATAGAAAGCTTTAGAAGGCTGGAAAATATCCGTGCTC

Function

symbol description
phyhip Enables protein tyrosine kinase binding activity. Involved in protein localization. Located in cytoplasm.

NR:

description
phytanoyl-CoA hydroxylase-interacting protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802691.1 True 2320 mRNA 0.50 5 38527740 38545362

Neighbor

gene id symbol gene type direction distance location
trnaf-gaa_6 NA coding upstream 96076 38431592 ~ 38431664 (+)
gda gda coding upstream 223774 38263367 ~ 38303966 (+)
c6h9orf85 csgr18h9orf85,clg9h9orf85,LOC105926787,LOC101078288,LOC103145608,LOC106963215,LOC102236857 coding upstream 269624 38248027 ~ 38258116 (+)
nkx3-1 NA coding upstream 449840 38075066 ~ 38077900 (+)
nkx2.7 NA coding upstream 473768 38050339 ~ 38053972 (+)
si:dkey-31c13.1 NA coding downstream 34051 38579413 ~ 38586296 (+)
tcf7l1b tcf7l1,LOC107082304 coding downstream 166923 38712285 ~ 38801716 (+)
tgoln2 NA coding downstream 271367 38816729 ~ 38827785 (+)
LOC120561457 NA coding downstream 286725 38832087 ~ 38837575 (+)
LOC120560406 NA coding downstream 1297784 39843146 ~ 39855737 (+)
G67766 NA non-coding upstream 13724 38422361 ~ 38514016 (+)
G67793 NA non-coding upstream 27069 38499850 ~ 38500671 (+)
G67764 NA non-coding upstream 58153 38414238 ~ 38469587 (+)
G67775 NA non-coding upstream 67929 38457593 ~ 38459811 (+)
G67765 NA non-coding upstream 96660 38417527 ~ 38431080 (+)
G67830 NA non-coding downstream 88409 38633771 ~ 38656197 (+)
G67836 dbnl non-coding downstream 95913 38641275 ~ 38657519 (+)
G67838 LOC104946535,LOC103470542,LOC101482088,LOC107393720,LOC101172587,LOC106915872 non-coding downstream 113242 38658604 ~ 38670657 (+)
G67844 NA non-coding downstream 145593 38690955 ~ 38795240 (+)
G67850 NA non-coding downstream 252349 38797711 ~ 38798346 (+)
nkx6.3 nkx6-3,LOC102787307,LOC104940825,LOC102218504 other upstream 120217 38355603 ~ 38407523 (+)
si:ch211-214j8.12 NA other upstream 204244 38309603 ~ 38323496 (+)
LOC120560165 LOC104964460,LOC103362321 other upstream 799035 37717903 ~ 37728705 (+)
trpm3 trpm3,LOC103470491,LOC103145554,LOC106928040,LOC101476865,LOC100708457 other upstream 2035045 36241579 ~ 36492695 (+)
G67824 NA other downstream 50449 38595811 ~ 38601821 (+)
G68023 NA other downstream 864860 39410222 ~ 39461478 (+)
LOC120560010 sds other downstream 1317101 39862463 ~ 39878496 (+)
vps33a vps33a other downstream 1588404 40133766 ~ 40164425 (+)
G68173 NA other downstream 1688111 40233473 ~ 40234591 (+)

Expression


Co-expression Network