LOC120561457


Basic Information

Item Value
gene id LOC120561457
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 38832087 ~ 38837575 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804598.1
ACAACAGCAGCGCCCGTACCGTAGCGTTAGCTGCATGCTGCTGTTGAATGAGCTGGGGTCTTTCAGCTGGAACAATGTCTTCGGTTGAGAGTTTGAGAGAGTTTGTCACCGAGAgactgactgctgctgctgaagaaatATTCAGAGCTGTTGGAAAAACTATCGTCGAGTACGAGGAAGAGATAGCTCGGCAGCGCAGACTGTTGGATGTCGTTTGGAAACCAGAAATCAAGTTACACAGGATAGAGCTCCCACAGCAACATGTCtgtaaggaggaggaggttctCTCTGACCAGCAGCTCTGTATTCAGGAGAGGAACTCCCGTCTGGACCAAGAGGACCCAGAGCCTCCACAGattaaagaagaacaggaggaactgtgcaCCAGTCAGGAGGGAAAGGAGCTTGTACTGAAGCAGGAGACTGATGCCTTTACGTTGACTCCTACTTATGAAGAAAGGGACCACAGTGAAGGTCAGACTCTGAACTTCAATCCTGATGATGGCACTCTAAGTGCAGCGGAGAAAGAGTCTGTAGCCAACATGCCCGTTATAACCTCTGTGGAATCAGAAGCAAACGGTGACCACCAGCTCCTCTCTCACAACTCTCATGAAGCTGAGAGCCGAGATCAGAAAGGAGGCAAGCGTGGAGACTCGGGATCAACTAGAAATGCAGAGCCAGAACCAAAGCAGAGACGAGGCAAGAGCAGAAGTCCCAGCAACAACGTAGACAACAGTAACCTGTCAGAGATTCCCCCTAATACTCAAACTGGTAAAAAGTCGTCCATATGTGACACATGTGGGAAAGACTTGAAGTTTAAATCCGCATTGCAGAGACACCTGAGAgtccacacaggtgagaagccgtaTTCTTGTAAAACGTGTGGGAAAGATTTCAGAAAAAACAGTGAGTTGTTGGTCCACGTGAGAAGAgcccacacaggtgagaagccgtaCGTTTGCAAGACCTGCGGGAAAAGATTCTGTGACGCTTCAGACTTATTAAAGCATACCAGAACTCACACAGGCGAGAAGCTATATTCTTGCAAAACATGCGGAAAAGAGTTTGGCTATAATAGTAACTTGTTGGCTCACATGAGACGAGCCCACACCGATGAGAAGCCGTACGTTTGCAAGACCTGCAGGAAAAGATTCTGCGTCGCCTCAGACTTATTAAAGCatatgagaactcacacaggtgagaagccgtaTGTTTGCAAAACATGTGGAAAAGAGTTTGGGCAAAATAGTAACTTGTCGGTCCACATAAGAAGAgcccacacaggtgagaagccgtaCGTTTGCAAGACCTGCAGGAAAGGATTCTGTGACGGTTCAGACTTATTAAGGCATATGAGAACCCACAGAGGAtgaaatctaaatctaaaatcGATCACCGTTTTTGACAATAAAGTTCTAGTGGTTCATAGTCAAAACTGACCAGAACCTTCAGACGTGAGGAGCAACATTTTTGCAGCAATTGTGGGAAAAGTGACCTGAGGATCACCACAGACAGGAGAAACCATCGAGCTGAAACTCTGGTAGAGACGTGTTTAactgaatgaaatacttttgcAGTAGTGACATCTCTGTTACTGAATGTTAAATATTAACAAAGATGAGATGTAAAGATCTTAATGTAAAGTTTCTCTTCGtataaccagtccctccagaaaaacgtgattatgcgatggcataattcaatgcataatcagccaaaggccgcatatttatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804598.1 True 1734 mRNA 0.46 2 38832087 38837575

Neighbor

gene id symbol gene type direction distance location
tgoln2 NA coding upstream 4302 38816729 ~ 38827785 (+)
tcf7l1b tcf7l1,LOC107082304 coding upstream 30371 38712285 ~ 38801716 (+)
si:dkey-31c13.1 NA coding upstream 245791 38579413 ~ 38586296 (+)
LOC120560325 phyhip,LOC102233080,LOC104946538,LOC100707279 coding upstream 286725 38527740 ~ 38545362 (+)
trnaf-gaa_6 NA coding upstream 400423 38431592 ~ 38431664 (+)
LOC120560406 NA coding downstream 1005571 39843146 ~ 39855737 (+)
adra1aa adra1a,LOC100708890,LOC102294828,LOC101475209 coding downstream 1356093 40193668 ~ 40205536 (+)
igsf9b NA coding downstream 1563040 40400615 ~ 40506486 (+)
zfand5a zfand5 coding downstream 1696473 40534048 ~ 40556066 (+)
snrnp200 snrnp200 coding downstream 1728495 40566070 ~ 40642169 (+)
G67850 NA non-coding upstream 33741 38797711 ~ 38798346 (+)
G67844 NA non-coding upstream 36847 38690955 ~ 38795240 (+)
G67838 LOC104946535,LOC103470542,LOC101482088,LOC107393720,LOC101172587,LOC106915872 non-coding upstream 161430 38658604 ~ 38670657 (+)
G67836 dbnl non-coding upstream 174568 38641275 ~ 38657519 (+)
G67830 NA non-coding upstream 175890 38633771 ~ 38656197 (+)
LOC120560859 NA non-coding downstream 11741 38849316 ~ 38859183 (+)
G67984 NA non-coding downstream 90086 38927661 ~ 38927937 (+)
G67985 NA non-coding downstream 102820 38940395 ~ 38940672 (+)
G67989 NA non-coding downstream 184108 39021683 ~ 39023137 (+)
G67991 NA non-coding downstream 291007 39128582 ~ 39129287 (+)
G67824 NA other upstream 230266 38595811 ~ 38601821 (+)
nkx6.3 nkx6-3,LOC102787307,LOC104940825,LOC102218504 other upstream 424564 38355603 ~ 38407523 (+)
si:ch211-214j8.12 NA other upstream 508591 38309603 ~ 38323496 (+)
LOC120560165 LOC104964460,LOC103362321 other upstream 1103382 37717903 ~ 37728705 (+)
LOC120560081 NA other upstream 2350776 36477798 ~ 36481311 (+)
G68023 NA other downstream 572647 39410222 ~ 39461478 (+)
LOC120560010 sds other downstream 1024888 39862463 ~ 39878496 (+)
vps33a vps33a other downstream 1296191 40133766 ~ 40164425 (+)
G68173 NA other downstream 1395898 40233473 ~ 40234591 (+)
tmem230b tmem230,LOC101174675,LOC101077900,LOC105939206,LOC103146401,LOC102236919,LOC103356612,LOC107086812,LOC103399110,LOC103397697 other downstream 1541820 40379395 ~ 40398123 (+)

Expression


Co-expression Network