zfand5a (zfand5)


Basic Information

Item Value
gene id zfand5a
gene name zfand5
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 40534048 ~ 40556066 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804393.1
aagaaacatCCATCCAGAAGGAacgggagagggagagagaaagagagagagagagaggtaggagGGCGAGGAAAGGGACATTTAAACCCACCTAAACCTGCCTGACACCGAGGACAACGACTCACGAGAGTAAAAGGACGTTACCAGGACCTGAAAACTCCTCGAGCTTTTTGCTTCTGCCAGGACGAAAAACGGCcactttcccccccccccttgtcgTCTCGCGAGAAAAACCTTCGTCGATTTTTAGCAGGTGATGATCTtggattattgttttttttctacttaacAAGGATGAAATCTGAAAAGAGCTCAGCTTGTGGAGCAATGGCCCAGGAGACGAACCAGAGCCAGGCGCCGATGCTTTGTGCCACCGGCTGTGGCTTCTACGGTAACCCTCGAACCAACGGCATGTGCTCCGTGTGCTACAAGGATCACCTGACGCGCCAGCAGAGCAGCGACCGCACAAGCCCCCTCAGCCCCATGGGATCGGCTGGTAGCCCTACCTCAGAGGCCTCGGCCATCCAGAGACTAGAAGCCAGTCTAGCCAAGGTCGACGCCTCCCCGGCTTCATCGCCCGACATGTCTAGAACTGTTCAAGGATCTCTTCCTGTGACTCAACAAATGACAGAGATGAGCATCTCGAGAGAGGACAAACCTGAACCCTTAGAGCccgTTGTAAACCAGCCTGCTGCTTGTAGCCCTTCTCCTGTAGCCTCCTCCAGCGCTGAAGAAGGGAAGGGAGACACCCCCAAACCCAAGAAGAACCGATGCTTCATGTGCCGCAAACGGGTCGGACTTACAGGATTCGACTGTCGCTGCGGCAACCTGTTCTGTGGCATCCACCGGTACTCCGACAAGCACAACTGTCCCTACGACTACAAGGCGGAGGCCGCCGCCAAGATCCGCAAGGAGAACCCGGTGGTGGTGGCCGACAAGATCCAGAGAATATAGATCCTACCAGAACGATCCAGAGAATATAGATCCTACCAGAACGATCCAGAGAATATAGATCCTACCAGAACGATCCAGAGAATATAGATCCTACCAGAACGATCCAGAGAATATAGATCCTACCAGAACGATCATGACCACGCCTCTCACTGTCCCAGAGACTGGAGAACGAGTGTGAGCCTTTTGAGATGAGCGCTGGCTTACGTGAGGATGGAAAGGACTTGATTTTACAAAATAACAACCTCAAGAGAAATGACAGACAggaggaagatgaagaagaagaag
>XM_039804394.1
aagaaacatCCATCCAGAAGGAacgggagagggagagagaaagagagagagagagaggtaggagGGCGAGGAAAGGGACATTTAAACCCACCTAAACCTGCCTGACACCGAGGACAACGACTCACGAGAGTAAAAGGACGTTACCAGGACCTGAAAACTCCTCGAGCTTTTTGCTTCTGCCAGGACGAAAAACGGCcactttcccccccccccttgtcgTCTCGCGAGAAAAACCTTCGTCGATTTTTAGCAGCAATGGCCCAGGAGACGAACCAGAGCCAGGCGCCGATGCTTTGTGCCACCGGCTGTGGCTTCTACGGTAACCCTCGAACCAACGGCATGTGCTCCGTGTGCTACAAGGATCACCTGACGCGCCAGCAGAGCAGCGACCGCACAAGCCCCCTCAGCCCCATGGGATCGGCTGGTAGCCCTACCTCAGAGGCCTCGGCCATCCAGAGACTAGAAGCCAGTCTAGCCAAGGTCGACGCCTCCCCGGCTTCATCGCCCGACATGTCTAGAACTGTTCAAGGATCTCTTCCTGTGACTCAACAAATGACAGAGATGAGCATCTCGAGAGAGGACAAACCTGAACCCTTAGAGCccgTTGTAAACCAGCCTGCTGCTTGTAGCCCTTCTCCTGTAGCCTCCTCCAGCGCTGAAGAAGGGAAGGGAGACACCCCCAAACCCAAGAAGAACCGATGCTTCATGTGCCGCAAACGGGTCGGACTTACAGGATTCGACTGTCGCTGCGGCAACCTGTTCTGTGGCATCCACCGGTACTCCGACAAGCACAACTGTCCCTACGACTACAAGGCGGAGGCCGCCGCCAAGATCCGCAAGGAGAACCCGGTGGTGGTGGCCGACAAGATCCAGAGAATATAGATCCTACCAGAACGATCCAGAGAATATAGATCCTACCAGAACGATCCAGAGAATATAGATCCTACCAGAACGATCCAGAGAATATAGATCCTACCAGAACGATCCAGAGAATATAGATCCTACCAGAACGATCATGACCACGCCTCTCACTGTCCCAGAGACTGGAGAACGAGTGTGAGCCTTTTGAGATGAGCGCTGGCTTACGTGAGGATGGAAAGGACTTGATTTTACAAAATAACAACCTCAAGAGAAATGACAGACAggaggaagatgaagaagaagaag

Function

symbol description
zfand5 Predicted to enable DNA binding activity and zinc ion binding activity. Predicted to act upstream of or within several processes, including face development; fibroblast migration; and platelet-derived growth factor receptor signaling pathway. Predicted to be located in cytoplasm.

NR:

description
PREDICTED: AN1-type zinc finger protein 5 isoform X1

GO:

id name namespace
GO:0003677 DNA binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K24687 ZFAND5_6; AN1-type zinc finger protein 5/6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804393.1 True 1239 mRNA 0.52 6 40534048 40556066
XM_039804394.1 False 1167 mRNA 0.54 6 40534048 40556066

Neighbor

gene id symbol gene type direction distance location
igsf9b NA coding upstream 27562 40400615 ~ 40506486 (+)
adra1aa adra1a,LOC100708890,LOC102294828,LOC101475209 coding upstream 328512 40193668 ~ 40205536 (+)
LOC120560406 NA coding upstream 678311 39843146 ~ 39855737 (+)
LOC120561457 NA coding upstream 1696473 38832087 ~ 38837575 (+)
tgoln2 NA coding upstream 1706263 38816729 ~ 38827785 (+)
snrnp200 snrnp200 coding downstream 10004 40566070 ~ 40642169 (+)
tmem127 tmem127,LOC106585551 coding downstream 111259 40667325 ~ 40678275 (+)
es1 LOC102195758,LOC101474177,LOC100709427,LOC104961732 coding downstream 128173 40684239 ~ 40693059 (+)
tmc1 LOC104961758,LOC103356604,LOC106904573,LOC103470573 coding downstream 142850 40698916 ~ 40728821 (+)
tmc2b tmc1,LOC103356627 coding downstream 181881 40737947 ~ 40778045 (+)
G68222 NA non-coding upstream 49935 40483677 ~ 40484113 (+)
G68217 NA non-coding upstream 68423 40463203 ~ 40465625 (+)
G68211 NA non-coding upstream 78001 40447645 ~ 40456047 (+)
G68214 NA non-coding upstream 79047 40454644 ~ 40455001 (+)
G68205 NA non-coding upstream 107415 40426157 ~ 40426633 (+)
G68148 NA non-coding downstream 1453 40557519 ~ 40957793 (+)
G68228 NA non-coding downstream 22878 40578944 ~ 40599036 (+)
G68230 NA non-coding downstream 51792 40607858 ~ 40613432 (+)
G68231 NA non-coding downstream 88783 40644849 ~ 40645154 (+)
G68233 NA non-coding downstream 93039 40649105 ~ 40718646 (+)
tmem230b tmem230,LOC101174675,LOC101077900,LOC105939206,LOC103146401,LOC102236919,LOC103356612,LOC107086812,LOC103399110,LOC103397697 other upstream 135925 40379395 ~ 40398123 (+)
G68173 NA other upstream 299457 40233473 ~ 40234591 (+)
vps33a vps33a other upstream 369623 40133766 ~ 40164425 (+)
LOC120560010 sds other upstream 655552 39862463 ~ 39878496 (+)
G68023 NA other upstream 1072570 39410222 ~ 39461478 (+)
G68285 NA other downstream 311181 40867247 ~ 40897108 (+)
trpm6 NA other downstream 335663 40891729 ~ 40949978 (+)
G68309 NA other downstream 427758 40983824 ~ 41070649 (+)
LOC120561096 NA other downstream 525541 41081607 ~ 41097796 (+)
anxa1a anxa1,LOC103133394,LOC103146482 other downstream 579711 41135777 ~ 41270849 (+)

Expression


Co-expression Network