tmem230b (tmem230,LOC101174675,LOC101077900,LOC105939206,LOC103146401,LOC102236919,LOC103356612,LOC107086812,LOC103399110,LOC103397697)


Basic Information

Item Value
gene id tmem230b
gene name tmem230,LOC101174675,LOC101077900,LOC105939206,LOC103146401,LOC102236919,LOC103356612,LOC107086812,LOC103399110,LOC103397697
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 40379395 ~ 40398123 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU91093
AGGCATAAACACGGAAGAGCCGTTAAGAGTCTCAGCAGCCAGCAGAGGCGGTTTAACGGTCATAGAGAAGCCTTGGTAACGAACAACAGCTCGCTGTAACCTCCCTccaaactagctagctagtttcaGGGGAATAACAGGCTAGCAGCCCTCATCACGTCGCAGTAACGTTAATATTCCGCTTGACTTGGTGACGTTATGACGGCGTCGGTAGATTGAAACAGCGTGAACAGCGTGGAAGCGGCTGAAGAAGATGCCTGCTCGGAACGTCGTGTCGGGTAGAGTCGGGTACTCCCGGGTGGCCTCTGATGATGACGGCTACATCGACCTACAGTTCAAAAGGAGCCCACCCAAAGTGCCGTACAAAGCCATAGCGCTCGCCACAGTCCTCTTCCTAATCGGCTCTCTGCTGATCATCATCGGCTCTCTTCTCCTGGCTGGATACTTCGGGGTCACTcACTCGGACCGAACCGTACCCGTCCTCATCATCGGGATCCTCGTCTTCCTGCCTGGTATTTACCACCCC
>TU91094
GCCACAGTCCTCTTCCTAATCGGCTCTCTGCTGATCATCATCGGCTCTCTTCTCCTGGCTGGATACTTCGGGGTCACTcACTCGGACCGAACCGTACCCGTCCTCATCATCGGGATCCTCGTCTTCCTGCCTGGTATTTACCACCTACGGATAGCGTACTACGCATCAAGGGGTTACCGGGGCTACTCCTACGACGATATCCCCGACTTTGATGACTGAAAACGCCAAAGCTTCAGCCACAGTCTTCCTGTACTCACGTATACTCTTAATATTCTGCTTCGGCTAATTCGAGGGCACTGATATTTTAAAAGAAGATGAGTTTAAAAACATAgtgtgtaaaaacaaaataacagacGTAGCAgctgt
>XM_039802032.1
TGCGCAGGCGCACTGCAGACCGAGGCATAAACACGGAAGAGCCGTTAAGAGTCTCAGCAGCCAGCAGAGGCGGTTTAACGGTCATAGAGAAGCCTTGGTAACGAACAACAGCTCGCTGTAACCTCCCTccaaactagctagctagtttcaGGGGAATAACAGGCTAGCAGCCCTCATCACGTCGCAGTAACGTTAATATTCCGCTTGACTTGGTGACGTTATGACGGCGTCGGTAGATTGAAACAGCGTGAACAGCGTGGAAGCGGCTGAAGAAGATGCCTGCTCGGAACGTCGTGTCGGGTAGAGTCGGGTACTCCCGGGTGGCCTCTGATGATGACGGCTACATCGACCTACAGTTCAAAAGGAGCCCACCCAAAGTGCCGTACAAAGCCATAGCGCTCGCCACAGTCCTCTTCCTAATCGGCTCTCTGCTGATCATCATCGGCTCTCTTCTCCTGGCTGGATACTTCGGGGTCACTGTGAGTATTAGGAACAgacACTCGGACCGAACCGTACCCGTCCTCATCATCGGGATCCTCGTCTTCCTGCCTGGTATTTACCACCTACGGATAGCGTACTACGCATCAAGGGGTTACCGGGGCTACTCCTACGACGATATCCCCGACTTTGATGACTGAAAACGCCAAAGCTTCAGCCACAGTCTTCCTGTACTCACGTATACTCTTAATATTCTGCTTCGGCTAATTCGAGGGCACTGATATTTTAAAAGAAGATGAGTTTAAAAACATAgtgtgtaaaaacaaaataacagacGTAGCAgctgtgacgtcacccattggtttgt

Function

symbol description
tmem230 Involved in synaptic vesicle transport. Located in cytoplasmic vesicle; endoplasmic reticulum; and trans-Golgi network.

NR:

description
transmembrane protein 230-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91093 False 526 TUCP 0.54 3 40379417 40382450
TU91094 False 366 lncRNA 0.48 2 40396468 40398103
XM_039802032.1 True 805 mRNA 0.51 3 40379395 40398123

Neighbor

gene id symbol gene type direction distance location
adra1aa adra1a,LOC100708890,LOC102294828,LOC101475209 coding upstream 173859 40193668 ~ 40205536 (+)
LOC120560406 NA coding upstream 523658 39843146 ~ 39855737 (+)
LOC120561457 NA coding upstream 1541820 38832087 ~ 38837575 (+)
tgoln2 NA coding upstream 1551610 38816729 ~ 38827785 (+)
tcf7l1b tcf7l1,LOC107082304 coding upstream 1577679 38712285 ~ 38801716 (+)
igsf9b NA coding downstream 2492 40400615 ~ 40506486 (+)
zfand5a zfand5 coding downstream 135925 40534048 ~ 40556066 (+)
snrnp200 snrnp200 coding downstream 167947 40566070 ~ 40642169 (+)
tmem127 tmem127,LOC106585551 coding downstream 269202 40667325 ~ 40678275 (+)
es1 LOC102195758,LOC101474177,LOC100709427,LOC104961732 coding downstream 286116 40684239 ~ 40693059 (+)
G68180 NA non-coding upstream 6353 40269701 ~ 40373042 (+)
G68171 NA non-coding upstream 76088 40213022 ~ 40303307 (+)
G68183 LOC103356614,LOC100711031,LOC102193827,LOC102292245,LOC104961739,LOC101477054 non-coding upstream 87726 40285455 ~ 40291669 (+)
G68151 NA non-coding upstream 102584 40271044 ~ 40276811 (+)
G68165 NA non-coding upstream 193345 40185646 ~ 40186050 (+)
G68202 NA non-coding downstream 8200 40406323 ~ 40407729 (+)
G68205 NA non-coding downstream 28034 40426157 ~ 40426633 (+)
G68211 NA non-coding downstream 49522 40447645 ~ 40456047 (+)
G68214 NA non-coding downstream 56521 40454644 ~ 40455001 (+)
G68217 NA non-coding downstream 65080 40463203 ~ 40465625 (+)
G68173 NA other upstream 144804 40233473 ~ 40234591 (+)
vps33a vps33a other upstream 214970 40133766 ~ 40164425 (+)
LOC120560010 sds other upstream 500899 39862463 ~ 39878496 (+)
G68023 NA other upstream 917917 39410222 ~ 39461478 (+)
G67824 NA other upstream 1777574 38595811 ~ 38601821 (+)
G68285 NA other downstream 469124 40867247 ~ 40897108 (+)
trpm6 NA other downstream 493606 40891729 ~ 40949978 (+)
G68309 NA other downstream 585701 40983824 ~ 41070649 (+)
LOC120561096 NA other downstream 683484 41081607 ~ 41097796 (+)
anxa1a anxa1,LOC103133394,LOC103146482 other downstream 737654 41135777 ~ 41270849 (+)

Expression


Co-expression Network