LOC120561096


Basic Information

Item Value
gene id LOC120561096
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41081607 ~ 41097796 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU91268
TACCCAGCGctggtcctcagtgtgtgaagatGACTTTGACCAGCAGGATGCAGAGGTGGTCTGTAGGGAGCTTGGCTGTGGGGCTCCTTCAGTCCTCCAGGGGGGCTCTTATGGAGAAGTGGAGCCTCCAATGAGGACCAAAGAGTTCCAGTGTGGAGGCCATGAGTCTGCTCTCCTGGACTGTAGAAGCTCAGGCTCAGATAGAAACACCTGCTCACCTGGAAAAGCTGTTGgactcacctgctcagAGCCTGATGCTGTCAGGTTGGTGGGAGGAG
>XM_039804052.1
CCAGCTGCCAGCAATCCAGCAGATCCAACCTGAGGACAGCACATGTGAGGatcagagcagagagcagacagaCGGGAAGACGGACGCAGAGAGACCCTCCACCTGGACATGGACCacctgatgctgctgctgctgctgtggagcTCAGGACTCCAGGCTGAAGGAGATCTCACCTCAACAgAGTCTGTCAGGTTGGTGGGAGGAGCCAGTCGCTGTGGAGGATCACTGGAGGTGAAACATGAAGGAGAATGGGGATCAGTGGATGGCTATGACAGGACCCTGAAGATAGCAGCAGACTCTGTCAGGCTGGTGAATGAGACCAGTCTGTGCTCAGGCAGACTGGAGGTGAAGACTGACCAGTCTACCCAGCGctggtcctcagtgtgtgaagatGACTTTGACCAGCAGGATGCAGAGGTGGTCTGTAGGGAGCTTGGCTGTGGGGCTCCTTCAGTCCTCCAGGGGGGCTCTTATGGAGAAGTGGAGCCTCCAATGAGGACCAAAGAGTTCCAGTGTGGAGGCCATGAGTCTGCTCTCCTGGACTGTAGAAGCTCAGGCTCAGATAGAAACACCTGCTCACCTGGAAAAGCTGTTGgactcacctgctcagAGCCTGATGCTGTCAGGTTGGTGGGAGGAGACAGTCGCTGTGCAGGAACACTGGAGGTAAAAACTAAAGGAGAATGGAGACCAGTAGATGGCCTTTATTATGACTGGACCCTGAAGATATCTGGCTGGACCCTGAAGACAGCATCTGCTGCCTGCAGAGAGTTAGACTGTGGCTCTGCTGTTTCTGTAGTAAAGAGAAATGAGTCCTCACGCAGATCTGTGTGGTGGATCAGGCCTGACTGTGTTGAGTCTGGATCTGTTCTGAGGGAGTGTGCAGAATCAAGTtcctcttccttcttccttAATCTCATCTGCTCAGACTCTGTCAGGCTGGTGAATGGGACCAGTCGGTGCTCAGGCAGACTGGAGGTGAAGACTAACCAGTCTACCCAGCGctggtcctcagtgtgtgaagatGACTTTGACCAGCAGGATGCAGAGGTGGTCTGTAGGGAGCTTGGCTGTGGGGCTCCTTCAGTCCTCCAGGGGGGTCTTGGGAGAAGTGGAGCCTCCAATGAGGACCAAAAGAGTTCCACTGTGGAGGCCATGAGTCTGCTCTCCTGGACTTGCCTGATGCTGTCAGGTTGGTGGGAGGAGCCAGTCGCTGTGCAGGAACACTGGAGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91268 False 278 lncRNA 0.56 2 41094858 41095218
XM_039804052.1 True 1236 mRNA 0.55 8 41081607 41097796

Neighbor

gene id symbol gene type direction distance location
rorb rorb coding upstream 10701 41016653 ~ 41070906 (+)
wu:fa19b12 NA coding upstream 198048 40878899 ~ 40883559 (+)
carnmt1 carnmt1 coding upstream 211632 40849730 ~ 40869975 (+)
LOC120560177 NA coding upstream 247062 40820609 ~ 40834545 (+)
tmc2b tmc1,LOC103356627 coding upstream 303562 40737947 ~ 40778045 (+)
LOC120560189 LOC104961756,LOC103367624,LOC102788780 coding downstream 124906 41222702 ~ 41254622 (+)
lsm1 lsm1,LOC103396910,LOC103398031 coding downstream 500431 41598227 ~ 41605767 (+)
LOC120560217 NA coding downstream 512136 41609932 ~ 41619652 (+)
LOC120560213 NA coding downstream 532940 41630736 ~ 41635889 (+)
LOC120560214 NA coding downstream 543534 41641330 ~ 41654650 (+)
G68323 NA non-coding upstream 37782 41036114 ~ 41043825 (+)
G68324 NA non-coding upstream 38428 41039582 ~ 41043179 (+)
G68325 NA non-coding upstream 39670 41041367 ~ 41041937 (+)
G68148 NA non-coding upstream 123814 40557519 ~ 40957793 (+)
G68281 NA non-coding upstream 131018 40950198 ~ 40950589 (+)
G68332 LOC102301842,LOC102206335,LOC101474785 non-coding downstream 34387 41132183 ~ 41141445 (+)
G68340 NA non-coding downstream 115727 41213523 ~ 41214336 (+)
G68356 NA non-coding downstream 323143 41420939 ~ 41484804 (+)
G68358 NA non-coding downstream 334590 41432386 ~ 41549693 (+)
G68374 NA non-coding downstream 383447 41481243 ~ 41552744 (+)
G68309 NA other upstream 10958 40983824 ~ 41070649 (+)
trpm6 NA other upstream 131629 40891729 ~ 40949978 (+)
G68285 NA other upstream 184499 40867247 ~ 40897108 (+)
tmem230b tmem230,LOC101174675,LOC101077900,LOC105939206,LOC103146401,LOC102236919,LOC103356612,LOC107086812,LOC103399110,LOC103397697 other upstream 683484 40379395 ~ 40398123 (+)
G68173 NA other upstream 847016 40233473 ~ 40234591 (+)
anxa1a anxa1,LOC103133394,LOC103146482 other downstream 37981 41135777 ~ 41270849 (+)
LOC120561097 LOC106674743,LOC106674997,LOC102290162 other downstream 168851 41266647 ~ 41267519 (+)
G68349 NA other downstream 268788 41366584 ~ 41404814 (+)
aebp1b LOC104948491,LOC103367614 other downstream 623004 41720800 ~ 41792911 (+)
G68429 NA other downstream 812028 41909824 ~ 42005961 (+)

Expression


Co-expression Network