LOC120561097 (LOC106674743,LOC106674997,LOC102290162)


Basic Information

Item Value
gene id LOC120561097
gene name LOC106674743,LOC106674997,LOC102290162
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41266647 ~ 41267519 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU91301
GCACTGGTCTGAAACAATACATGAAAAACAAGCCTGTTCGCTGGGGTTATAAACTCTTTGTTCTGGCAGACTCCAGGAACGGTTATACATGGGACTTTTTTGTTTATGAGGGAAAGTGTCAGGGAAACAGTGGTAAGGGACTCAGTTATGAGGCAGTGATGGAGCTAATTGATGTACAGTTGCTGGGCACTGGCTATAAGGTCTTTGTGGACAATTTTTATACAAGTCCAATCCTGTTTCGTGACCTCCTTCTTAAGAGGATCTGGGCATGCGGAACCATCCGCACAAACAGAATCGGATTCccaaggtcaaaggtcaacattCTGGTCTCAAAATCTCCCCGTGGCAGCATACGCTGGATCAGGAATGGCTCCTTGCTCTTTGTTCAGTGGCGAGACACAAGGGATGTTTTTCTGTGCTCAACTCTCCACAGGGCCCACGCAGAGGACACAGTGCAGAGGAGGGTCAAAGGTGCAGATGGGCAGTGGCAGCTGAAGGACGTCTCAGTTCCACCAGTGGTGAAGGACTACAACCGGTGCATGGGTGGAGTGGACCACTCAGATGCCCTCATAGGGTATTACAAAGTCCTGCAAAAGACCCAACGGTGGTACAAGACTCTGTTTTACCACTTCATGGACATCGCA
>XM_039804053.1
ATGAGGGACTCCTGTAGAAGAAACTATCACCCTGGCCAGGAAATCGCCATTGATGAGAATGGTTTGCTTCAAAGCCCGCGCACTGGTCTGAAACAATACATGAAAAACAAGCCTGTTCGCTGGGGTTATAAACTCTTTGTTCTGGCAGACTCCAGGAACGGTTATACATGGGACTTTTTTGTTTATGAGGGAAAGTGTCAGGGAAACAGTGGTAAGGGACTCAGTTATGAGGCAGTGATGGAGCTAATTGATGTACAGTTGCTGGGCACTGGCTATAAGGTCTTTGTGGACAATTTTTATACAAGTCCAATCCTGTTTCGTGACCTCCTTCTTAAGAGGATCTGGGCATGCGGAACCATCCGCACAAACAGAATCGGATTCccaaggtcaaaggtcaacattCTGGTCTCAAAATCTCCCCGTGGCAGCATACGCTGGATCAGGAATGGCTCCTTGCTCTTTGTTCAGTGGCGAGACACAAGGGATGTTTTTCTGTGCTCAACTCTCCACAGGGCCCACGCAGAGGACACAGTGCAGAGGAGGGTCAAAGGTGCAGATGGGCAGTGGCAGCTGAAGGACGTCTCAGTTCCACCAGTGGTGAAGGACTACAACCGGTGCATGGGTGGAGTGGACCACTCAGATGCCCTCATAGGGTATTACAAAGTCCTGCAAAAGACCCAACGGTGGTACAAGACTCTGTTTTACCACTTCATGGACATCGCACTTGTGAACGCCTTCCTCCTCCAGAAGGACCTTGCCAATTGGTAA

Function

NR:

description
piggyBac transposable element-derived protein 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91301 False 644 TUCP 0.49 2 41266726 41267474
XM_039804053.1 True 768 mRNA 0.49 2 41266647 41267519

Neighbor

gene id symbol gene type direction distance location
LOC120560189 LOC104961756,LOC103367624,LOC102788780 coding upstream 12025 41222702 ~ 41254622 (+)
rorb rorb coding upstream 195741 41016653 ~ 41070906 (+)
wu:fa19b12 NA coding upstream 383088 40878899 ~ 40883559 (+)
carnmt1 carnmt1 coding upstream 396672 40849730 ~ 40869975 (+)
LOC120560177 NA coding upstream 432102 40820609 ~ 40834545 (+)
lsm1 lsm1,LOC103396910,LOC103398031 coding downstream 330708 41598227 ~ 41605767 (+)
LOC120560217 NA coding downstream 342413 41609932 ~ 41619652 (+)
LOC120560213 NA coding downstream 363217 41630736 ~ 41635889 (+)
LOC120560214 NA coding downstream 373811 41641330 ~ 41654650 (+)
LOC120560215 NA coding downstream 431843 41699362 ~ 41702500 (+)
G68340 NA non-coding upstream 52311 41213523 ~ 41214336 (+)
G68332 LOC102301842,LOC102206335,LOC101474785 non-coding upstream 125202 41132183 ~ 41141445 (+)
G68323 NA non-coding upstream 222822 41036114 ~ 41043825 (+)
G68324 NA non-coding upstream 223468 41039582 ~ 41043179 (+)
G68325 NA non-coding upstream 224710 41041367 ~ 41041937 (+)
G68356 NA non-coding downstream 153420 41420939 ~ 41484804 (+)
G68358 NA non-coding downstream 164867 41432386 ~ 41549693 (+)
G68374 NA non-coding downstream 213724 41481243 ~ 41552744 (+)
G68378 NA non-coding downstream 231058 41498577 ~ 41503918 (+)
G68379 NA non-coding downstream 232778 41500297 ~ 41500710 (+)
LOC120561096 NA other upstream 168851 41081607 ~ 41097796 (+)
G68309 NA other upstream 195998 40983824 ~ 41070649 (+)
trpm6 NA other upstream 316669 40891729 ~ 40949978 (+)
G68285 NA other upstream 369539 40867247 ~ 40897108 (+)
tmem230b tmem230,LOC101174675,LOC101077900,LOC105939206,LOC103146401,LOC102236919,LOC103356612,LOC107086812,LOC103399110,LOC103397697 other upstream 868524 40379395 ~ 40398123 (+)
G68349 NA other downstream 99065 41366584 ~ 41404814 (+)
aebp1b LOC104948491,LOC103367614 other downstream 453281 41720800 ~ 41792911 (+)
G68429 NA other downstream 642305 41909824 ~ 42005961 (+)
LOC120561105 NA other downstream 665044 41932563 ~ 41939058 (+)
G68504 NA other downstream 1054954 42322473 ~ 42396643 (+)

Expression


Co-expression Network