RNA id: TU91301


Basic Information

Item Value
RNA id TU91301
length 644
RNA type TUCP
GC content 0.49
exon number 2
gene id LOC120561097
representative False

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41266647 ~ 41267519 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GCACTGGTCTGAAACAATACATGAAAAACAAGCCTGTTCGCTGGGGTTATAAACTCTTTGTTCTGGCAGACTCCAGGAACGGTTATACATGGGACTTTTTTGTTTATGAGGGAAAGTGTCAGGGAAACAGTGGTAAGGGACTCAGTTATGAGGCAGTGATGGAGCTAATTGATGTACAGTTGCTGGGCACTGGCTATAAGGTCTTTGTGGACAATTTTTATACAAGTCCAATCCTGTTTCGTGACCTCCTTCTTAAGAGGATCTGGGCATGCGGAACCATCCGCACAAACAGAATCGGATTCccaaggtcaaaggtcaacattCTGGTCTCAAAATCTCCCCGTGGCAGCATACGCTGGATCAGGAATGGCTCCTTGCTCTTTGTTCAGTGGCGAGACACAAGGGATGTTTTTCTGTGCTCAACTCTCCACAGGGCCCACGCAGAGGACACAGTGCAGAGGAGGGTCAAAGGTGCAGATGGGCAGTGGCAGCTGAAGGACGTCTCAGTTCCACCAGTGGTGAAGGACTACAACCGGTGCATGGGTGGAGTGGACCACTCAGATGCCCTCATAGGGTATTACAAAGTCCTGCAAAAGACCCAACGGTGGTACAAGACTCTGTTTTACCACTTCATGGACATCGCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91296 lncRNA upstream 52390 41213523 ~ 41214336 (+) False G68340
TU91295 lncRNA upstream 52390 41214002 ~ 41214336 (+) True G68340
TU91270 lncRNA upstream 125281 41132183 ~ 41141445 (+) True G68332
TU91269 lncRNA upstream 134183 41132183 ~ 41132543 (+) False G68332
TU91268 lncRNA upstream 171508 41094858 ~ 41095218 (+) False LOC120561096
TU91312 lncRNA downstream 99110 41366584 ~ 41404814 (+) False G68349
TU91322 lncRNA downstream 99110 41366584 ~ 41400573 (+) False G68349
TU91317 lncRNA downstream 111967 41379441 ~ 41400573 (+) True G68349
TU91306 lncRNA downstream 113294 41380768 ~ 41400573 (+) False G68349
TU91329 lncRNA downstream 153465 41420939 ~ 41484804 (+) True G68356
XM_039802432.1 mRNA upstream 12104 41222702 ~ 41254622 (+) True LOC120560189
XM_039802431.1 mRNA upstream 51856 41193223 ~ 41214870 (+) False anxa1a
XM_039804052.1 mRNA upstream 168930 41081607 ~ 41097796 (+) True LOC120561096
XM_039802430.1 mRNA upstream 195820 41016653 ~ 41070906 (+) False rorb
XM_039802429.1 mRNA upstream 195820 41054751 ~ 41070906 (+) True rorb
XM_039802520.1 mRNA downstream 330753 41598227 ~ 41605767 (+) True lsm1
XM_039802490.1 mRNA downstream 342458 41609932 ~ 41619652 (+) True LOC120560217
XM_039802486.1 mRNA downstream 363262 41630736 ~ 41635889 (+) True LOC120560213
XM_039802487.1 mRNA downstream 373856 41641330 ~ 41654650 (+) True LOC120560214
XM_039802489.1 mRNA downstream 431888 41699362 ~ 41702500 (+) True LOC120560215
TU91271 other upstream 4376 41207784 ~ 41262350 (+) True anxa1a
TU91275 other upstream 4376 41207784 ~ 41262350 (+) False anxa1a
TU91276 other upstream 4376 41207784 ~ 41262350 (+) False anxa1a
TU91277 other upstream 4376 41207784 ~ 41262350 (+) False anxa1a
TU91279 other upstream 4376 41207784 ~ 41262350 (+) False anxa1a
TU91319 other downstream 99110 41366584 ~ 41400573 (+) False G68349
TU91431 other downstream 453539 41721013 ~ 41756128 (+) False aebp1b
TU91472 other downstream 642350 41909824 ~ 42005961 (+) True G68429
TU91474 other downstream 665089 41932563 ~ 41934316 (+) False LOC120561105
TU91478 other downstream 665089 41932563 ~ 41934316 (+) False LOC120561105

Expression Profile