RNA id: TU91271


Basic Information

Item Value
RNA id TU91271
length 3306
RNA type TUCP
GC content 0.46
exon number 6
gene id anxa1a
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41135777 ~ 41270849 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ttagttactagttactttagttactccactacattcatctgttacagctttagttactagttactttagttactccgctacattcatctgttacagctttagttactagttactttagttactccgctacattcatctgttccagctttagttactagttactttagttactccgctacattcatctgttccagctttagttactagttactttagttactccgctacattcatctgttccagctttagttactagttactttagttactccgctaaattcatctgttccagctttagttactagttactttagttactccgctacattcacctgttacagctttagttactttagttactccactactttcatctgttacagctttagttactttagttactccactactttcatctgttacagctttagttactttagttactccactacattcatctgttacagctttagttactagttactttagttactccgctacattcatctgttccagctttagttactagttactttagttactccgctaaattcatctgttccagctttagttactagttactttagttactgccgctacattcatctgttccagctttagttactagttactttagttactccgctacattcatctgttccagctttagttactagttactttagttactccgctacatttatctgttacagctttagttactagttactttagttactccgctacattcatctgttccagctttagttactagtaactttagttactccgctaaattcatctgttccagctttagttactagttactttagttactcctgcTTTAGTTAGTCAGGCATatcaggacatagcagggcgttTTCAATGCAGAACTTTAACTAGTACCAGAGTATtataacagtgtggtattagtaccagtgtggtattagtactttaactAGTACCAGAGTATtataacagtgtggtattagtaccagtgtggtattagtactttaaaTTGTACCAGAGTATTATAactgtgtggtattagtactttaactAGTACCAGAGTATtataacagtgtggtattagtaccagtgtggtattagtactttaacttgtaacagagtattataacagtgtggtattagtaccagtgtggtattagtactttaacttgtaacagagtattataacagtgtggtattagtaccagtgtggtattagtactttaacttgtaacagagtattataacagtgtggtattagtactagtACTCTGTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCGTCTAACATGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCGTCTAACATGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCGTCTAACATGTAGACCCTGTCCCCTCTAACATGTAGACCCTGTCCCCTCTAACATGTAGACCCTGTCCCGGCTAACATGTAGACCCTGTCCCCTCTAACATGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCCTCTAACATGTAGACCCTGTCCCCTCTAACATGTAGACCCTGTCCCGGCTAACATGTAGACCCTGTCCCCTCTAACATGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCGTCTAACCTGTAGACCCTTTCCCCTCTAACATGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCGTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCGTCTAACCTGTAGACCCTGTCCCTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCGTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCCTCTAACCTGTAGACCCTGTCCCCTCTAACATGTGGTCCTCTGATTGCAGTTTTCGAGCGGTACTCCAAGTACAGCAAAGTGGACGTGTCCAAAGCCATCGACCTGGAGATGAAGGGAGACATCGAGAGCTGTCTCACCGCCGTAGTGAAGTGTGCTGGGAGCCGGCCGGCCTTCTTCGCTGAGAAGCTCTACTTGTCCATGAAGGGTAAAGGAACCCGAAAACACACCCTGACCCGCATCATGGTGAGCCGCTCGGAGGTCGACCTGAAACGGATCAAGGACGAGTACAAGAAGGCCTACGGAAAAACCCTGTACCAGGACAttctggtacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacacacacagacacagacacacacacacacacacacacacacacacacacacacacacacagagagacacacacacacacacacacacagacacagacacacacacacacacacacacacacacacacagagacacacacacacagacacagacacagagacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacagacacagacacatacacagcacacagacacagacacacagacacacacacacagacacagacacacacagacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacagacacacacagacacagacacagacacacacagacacacacacacacagacacacacacacacacagacgcacacacacacacacagacacacacacagacacagacacacacacacagacacacagacacagacacacacacacacagacacacacacacacacagacacacacacacacacacagacacagacacagacacacacagacacacacacagacacacacacacagacacacacacacagacacagacacacacacagacacacacacagagacaaacacactcacacacacacacacacacagagacacacacacacagagacacacacacaaagagacatatacacacacacacacacacacacacacacacagacacagac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91270 lncRNA upstream 66339 41132183 ~ 41141445 (+) True G68332
TU91269 lncRNA upstream 75241 41132183 ~ 41132543 (+) False G68332
TU91268 lncRNA upstream 112566 41094858 ~ 41095218 (+) False LOC120561096
TU91237 lncRNA upstream 137135 41061839 ~ 41070649 (+) False G68309
TU91260 lncRNA upstream 165847 41041367 ~ 41041937 (+) True G68325
TU91312 lncRNA downstream 104234 41366584 ~ 41404814 (+) False G68349
TU91322 lncRNA downstream 104234 41366584 ~ 41400573 (+) False G68349
TU91317 lncRNA downstream 117091 41379441 ~ 41400573 (+) True G68349
TU91306 lncRNA downstream 118418 41380768 ~ 41400573 (+) False G68349
TU91329 lncRNA downstream 158589 41420939 ~ 41484804 (+) True G68356
XM_039804052.1 mRNA upstream 109988 41081607 ~ 41097796 (+) True LOC120561096
XM_039802430.1 mRNA upstream 136878 41016653 ~ 41070906 (+) False rorb
XM_039802429.1 mRNA upstream 136878 41054751 ~ 41070906 (+) True rorb
XM_039802428.1 mRNA upstream 260975 40891729 ~ 40946809 (+) True trpm6
XM_039802427.1 mRNA upstream 324225 40878899 ~ 40883559 (+) True wu:fa19b12
XM_039804053.1 mRNA downstream 4297 41266647 ~ 41267519 (+) True LOC120561097
XM_039802520.1 mRNA downstream 335877 41598227 ~ 41605767 (+) True lsm1
XM_039802490.1 mRNA downstream 347582 41609932 ~ 41619652 (+) True LOC120560217
XM_039802486.1 mRNA downstream 368386 41630736 ~ 41635889 (+) True LOC120560213
XM_039802487.1 mRNA downstream 378980 41641330 ~ 41654650 (+) True LOC120560214
TU91293 other upstream 405 41193258 ~ 41207379 (+) False anxa1a
TU91239 other upstream 169046 41024999 ~ 41038738 (+) True G68309
TU91230 other upstream 257806 40944533 ~ 40949978 (+) False trpm6
TU91231 other upstream 257806 40949520 ~ 40949978 (+) False trpm6
TU91208 other upstream 310676 40867247 ~ 40897108 (+) True G68285
TU91301 other downstream 4376 41266726 ~ 41267474 (+) False LOC120561097
TU91319 other downstream 104234 41366584 ~ 41400573 (+) False G68349
TU91431 other downstream 458663 41721013 ~ 41756128 (+) False aebp1b
TU91472 other downstream 647474 41909824 ~ 42005961 (+) True G68429
TU91474 other downstream 670213 41932563 ~ 41934316 (+) False LOC120561105

Expression Profile