RNA id: TU91293


Basic Information

Item Value
RNA id TU91293
length 704
RNA type TUCP
GC content 0.58
exon number 8
gene id anxa1a
representative False

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41135777 ~ 41270849 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GCTCCCAGTCGCCAAAAACGCCCCTGGAAACTCTCTGAGAAACTCTTCTTTCCCTCTGAAAACACACGCAGCCCCAGCATGTCTTTCATCCAAGCCTTCCTGCAGCAGACCGTCTACATGGGCATGCCCGATGACTCAgctctgcCGAGGGAGGGAACCGTGACCCCGGCAGTGAACTTCAGCGCCAGCGGAGACGCGGCCGTCCTGGACAAAGCCATCAAAGCTAAAGGTGTGGATGAGAACACCATCATTGAGATTCTGGTGAAAAGAAGCAACGAGCAGAGACAGAGGATTAAAGACGCGTACCAGCAGGCCAGCGGCAAGCCTCTGGATGTGGCGCTGAAGAGCGCTCTGAGTGGAGATCTGGAGGATATGGTTCTGGCTCTGCTGAAAACACCAGCCCACTACGACGCTCAGCAGCTGAAGGCGGCCATGAAGGGTCTGGGCACAGACGAGGAGGTCCTCATCGAGATCCTGGCCTCCAGAACCAACCGAGAGATCCTGGACATCAAGAAAGCCTACAAGGAAGACTACAAGAAGGATCTGGAGTCTGACATCAAGAGCGACACCGGCGGAGACTTCAGAACCGCTCTGCTCGAACTCTGCAAGGGCGGCAGGACCGTGAACGAGAGCAGATGGTGGACAGCGATGCCCGGGCGCTGTGCGTGGCGGCGAGGGCAGGAAGGGAACCGACTGCAAACCCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91270 lncRNA upstream 51813 41132183 ~ 41141445 (+) True G68332
TU91269 lncRNA upstream 60715 41132183 ~ 41132543 (+) False G68332
TU91268 lncRNA upstream 98040 41094858 ~ 41095218 (+) False LOC120561096
TU91238 lncRNA upstream 122609 40983824 ~ 41070649 (+) False G68309
TU91237 lncRNA upstream 122609 41061839 ~ 41070649 (+) False G68309
TU91296 lncRNA downstream 6144 41213523 ~ 41214336 (+) False G68340
TU91295 lncRNA downstream 6623 41214002 ~ 41214336 (+) True G68340
TU91312 lncRNA downstream 159205 41366584 ~ 41404814 (+) False G68349
TU91322 lncRNA downstream 159205 41366584 ~ 41400573 (+) False G68349
TU91317 lncRNA downstream 172062 41379441 ~ 41400573 (+) True G68349
XM_039804052.1 mRNA upstream 95462 41081607 ~ 41097796 (+) True LOC120561096
XM_039802430.1 mRNA upstream 122352 41016653 ~ 41070906 (+) False rorb
XM_039802429.1 mRNA upstream 122352 41054751 ~ 41070906 (+) True rorb
XM_039802428.1 mRNA upstream 246449 40891729 ~ 40946809 (+) True trpm6
XM_039802427.1 mRNA upstream 309699 40878899 ~ 40883559 (+) True wu:fa19b12
XM_039802432.1 mRNA downstream 15323 41222702 ~ 41254622 (+) True LOC120560189
XM_039804053.1 mRNA downstream 59268 41266647 ~ 41267519 (+) True LOC120561097
XM_039802520.1 mRNA downstream 390848 41598227 ~ 41605767 (+) True lsm1
XM_039802490.1 mRNA downstream 402553 41609932 ~ 41619652 (+) True LOC120560217
XM_039802486.1 mRNA downstream 423357 41630736 ~ 41635889 (+) True LOC120560213
TU91239 other upstream 154520 41024999 ~ 41038738 (+) True G68309
TU91230 other upstream 243280 40944533 ~ 40949978 (+) False trpm6
TU91231 other upstream 243280 40949520 ~ 40949978 (+) False trpm6
TU91208 other upstream 296150 40867247 ~ 40897108 (+) True G68285
TU91093 other upstream 810808 40379417 ~ 40382450 (+) False tmem230b
TU91271 other downstream 405 41207784 ~ 41262350 (+) True anxa1a
TU91275 other downstream 405 41207784 ~ 41262350 (+) False anxa1a
TU91276 other downstream 405 41207784 ~ 41262350 (+) False anxa1a
TU91277 other downstream 405 41207784 ~ 41262350 (+) False anxa1a
TU91278 other downstream 405 41207784 ~ 41259551 (+) False anxa1a

Expression Profile