gda (gda)


Basic Information

Item Value
gene id gda
gene name gda
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 38263367 ~ 38303966 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803432.1
ATTGGCTGCAGATTGTCTCCGCAGTCAGGTGGAGTTCTGCTGATCGAAACTCTCCAAAGACAAAACCCCAGTGGTGCTGCCGCTGCAGGTAATTCCACTGCTCGACTCCGAACTCATCTGTTGAAAGGATGGCAAACTCTGACCGACCCAGCGCCGACATTTCTCACGTCTACCGGGGGACGTTTATCCACTCGACGCAGCAAACCGCGCTACAGATCCTGGAAGATCAACTCCTGGGTGTGGATACAGACGGAAAGATTGCTTTCATCGAGAAAGGAGCGGAGCTGAACCGACTGTCTCAGAGCTTTGGATTCAGTCCGTCTGAAGTCACTCAACTGGCACAACATGAGTTCTTCATGCCGGGACTGGTGGACACCCACATCCACGCGCCCCAGTACTGCTACGCCGGCACGGCGCTGGACATGCCCCTGCTGCAGTGGCTCAACACCTACACCTTCCCTGTGGAGTCTCGCTTCAAGGACTTGGAGTTCGCCCGCCGCGTCTACACTCAAGTAGTGCAAAGGACCCTGAGAAACGGAACGACCACTGCATGTTACTTTGCTACCATACACACAGATGCCTCTCTCCTGTTGGGCCAGATTGCAAATGACTTTGGTCAGCGAGCCTTGGTGGGGAAGGTGTGTATGGACAGGAACAACTGTGTGAAACATTACAAAGAGACCAATCAGGAGTGTCAAGAGGAAACCCGTCGGTTCATTGCAGAGCTCTTGAACAAAAAGTACCCTCTGGTGAGGCCGGTGGTGACGCCTCGCTTCGCTCCATCCTGCACAGGAGCCTTGCTGGGCCAGCTGGGAGCAATCGCTAAGAATAACAACCTGCACATTCAGAGTCACATCAGTGAAAACGCAGAGGAAGTTAAGCTCGTGAAGGAGCTGTTCCCGGAGTCAGAGTCTTACACAGACGTCTATCACAAGTACAACCTGCTCACTGACAAGACGGTGATGGCCCATGGCTGCTACCTCAGTGATGCAGAGTTGACTCTGTTCAGAGAGACAGGAGCCGCTTTGTCTCACTGTCCCAATTCCAACATCTCGTTGTGCAGCGGCGTGTTGGACGTCCGCAACGTCCTGAAACACAAAGTGAAGTTGGGGCTGGGAACAGACGTGGCGGGCGGCTACTCGGCCTCCATGCTGGACGCTGTGAGACGAGCTCTGGACACATCCAAAGTCCTGACGATCCAGGACCCAGACCACCAAACGCTCACGTTTgaggaggttttcagactgGCCACACTGGGAGGAAGCCATgCTTTGTCCCTGGATGACCATACGGGGAACTTCGAAGTGGGCAAAGACTTTGACGCCCTGAGGGTGAACGTAGCTGCTGCTGACGGACCCATCGACATGATCCAGTGTGAGGGACCAAAGGTTATTTTGGAAAAGTTCTTGAATTTGGGTGACGATCGTAACATCGCGGAGGTGTTTGTGGCCGGGAGGAAGGTGGTACCATTCTCCCCCAGTTTAAACATCGCTTCCATGTCTGTTAACGGCACTGGGTCCTGACCTGACTCCACTTATACCTTCACCTTTCCTGTCCatgtctctcttcctccctccacaTCCCAGCTCAACATCTTTTCATCCCTTCTTTTAACTAAGTCACTCCCTGTGGACCCTCTGCTCCGGGAAAGTCGGCTCGAAGAGGTTTTTAACTCCCAAAATACATCATGCAAAACGTGCAGCAAAAGAAGAATCAGCTGGAAACGCCCTACTGTACAACTGGACACAAAAAGCCAAACaatataaattatttattagaataaagaatataaaCTAAGGCATAAATTTGGATGTGAGGTGTGTTAGTGAGTCAGGTTCATGTGGATGTGTTTGGTTAACGTAGCGTGAGGTATTATGATGTAAAAGTAGAAGAAGGCTTCATCTACGttactacgttttggtttataaacgaatatcttttgctacgtgtACGTCTCGCGTCCACGCTACTGCggtgtttccgagcccctaaaacggagacTTTTGGAAGCTCTGCTGCCCCCTTTTTGGTTCTAAACTACTCCAGgtttgctttgtagtctggacggacaCAAACAGAGAGCTTTGGAAACGACAAcacacgtcagtcagtcttattgGTTAGGTAGCTTACATTAGAGCTTAGTTCGGGCCCCAAagaatcaagcccgaccctacccgagcccgtgcacgttgtaTCCGAGCCTGGCCCGgcacattaactgtaattatgagccagAGCCCGATTTAAATCcgacatttctttttaatacgtgggccgttatatctgacgttctcaactaaatttcagagttgtttgaactgcagaaatctgtttaggaggggtatgcttggagaagtaacaaaGGAGGACATTGgaggctgactatcatcttttctgccgttttttttttttttgctgtcataGGCGAGCAGCGTGCCGCAATTAATGCACTCGACATATACTCGACAGatatgttgtcactgcccacgacttgtttaaaatggttccatacctccgactttcctccaaacttgctcaaaggtaggctaattctcctgtttttcttacatcttttctttacatcttcaagctccatgttgcttGATGCCACTTAAGctacaccatacagcccagcagcccCGGTGTGACGCGTGCGATTGGAGGAGACGCTTGCATGATTGGGGAATAGCTTTCTCCTCACCCAATTAGGGTAATAaagtaatgtttaaaaaaatcacaaatgcttgatcaagagCCCGGCCCGGCCAGAGGATAGTGGCGGGAAATGTTGGCCTCGGCCTTGGCCTGGCTCGGGtttcgggcagagaatctaacctctagcttacagacctttcagtaacagctcCACCTCGTCATCGCTCCGAGATAATACatccctgctcttacttttcaccgttgttgttctttctccaaaagtattttctgtatttttaactTCTACATCCATGATCTTCAACCgcagagtaacgtcagacaatctgcttcctgtttacaccggcacgcacatgcccagtgggggtgaatggtcatgtgatacGTGTTGTCAGACGTGTTAATATGGACAAAGATaagttctgctactggagctgaaactcttgtgtggacagagatcgtttttgtctcaaaatgccgcttaaaaatgaaaacctaGTGTGGATGTAGGCTAAGACAAATAAGTAAGACATTAATTATCACCATAACAGTCTTTTATTGAGGTTCAGTCAGGGACACACAAGACTGTGGTCAGCTGAGCTCAAATTCAGTCTGTTCTTTAAGTCTTTCAGGGGAATTTATAACAAGAAATAAGGGACGTATTAGCATTGCTAATTGTTGTCATCATGTCTGCGTACTAAAACATAttcatgaaccctaacccttcgCTGATTAAAAAGTCACTGTTTATGTTCATGTGCACATTGTTGTAGACTTTTTTTAAGCTAGCTAATGGTGATGGCCAGGAGCAGAGCAAAGGGGGTATCTTCTGGGGCTCCAGCCCTGAATGTTGTCCTAAAAGCCCCGAATCTTttagggttttaaaataactttgtgtcatttcccctcagtctctctgactggaaCGGCAAATCAACGGAGCAAAAGTTCTGTTACTGGGGAAATATCGCCTTCGTTTCAACATCAGTAATGCTGCTTACGCCAAATTCCTACCCCTACCTACGTTATGTAACTTAAACATAGAAACATCAGACAGTTTTGCCTCATTTTAGGTGGCAGGAGTGAAAATGATtagttgtgttctggtttcagaacgATTAAGACCGTAAGAGAACAGTTAGATATAAAACAGGATGTCGCCTCTACAGGATGATTGTTTTTTCTTGGCAACTATtatgcagtggtgtagtctacgtgatacgcaggtatacacagtatacccactaagaaagctccaggacttccgtatacccacttaaaaatgcccaatgacatgcAACGACgaactttccattatatttttgatatattttgaattgtcatctgtgtttttcttcttcatataAGCTAAATAAAgctatttccaccgtaaattggggCATTAAAGCGTATCCCAATACAggacccagaccccccactatgatatgccccccccccaggcagattctggccaatatgtATATACAGCACAGTATACCCACTGCAATACATTAGACTTAACCACTGCTATTATGTTTTCCCCAAATGAGGTACAGATTTGTAAGCATTTTATTatcaaatggcttgaaaaataGTGCACATATCTGCAGCCCAATAACCACTCACGCGCTACAATCAAGcactacttgagtaaaagtacaagtatcttaccagaaaatgactttggtagaagttaaagtcacctttcAGAAtactacttgagtaaaagtctgatatttactgtacctaagtatcaaaagtaattttctgatattaaatgtacttaattactAGAAGTAAAGCTTTGATTAGGAACTTTAGTGTGGCTTctttatagtaaagcataacaTTCAGGGTGTCCACACCTTCACACATCAAATCCAAAGTCGGACTTCAACAAAGGAAGAATCTTTCACTTTGACGTACCAAAACATTTCTTGGAAGTAAGGAGTAACAAAGATGCTGAGGGGAAATGTCCCGGAgtaaaaagtatacattttatttaggaaatgtagtgaagtaaaagtaaaagtttcaagaaataaataacgaagtaaagtacagatacgtgtaAATTCTACATAAGTACACTGGTCgtattatatataattaattgttgtgttgtgtatggaAATGTGAGCTGCTGGATACTCGAATTTCCCCATTTGCATGAATAAACTATCTTCTATCGATCTATCTGTGAATGGAGGATGCCCCCGGACTCCTCTCCCTATTTTACGTTGATATCCCGTTGTGTTGCCTCCGTACATTTTACTGGACAGTTGTCTGTAAAGTTAGGTGACATATTAACGTATAGGACTTTGCGCCGGTGAGATAAAGCTGCTCAGCGCAGCTGCTGCAGTGTCTGACCTAATTATCTTTAGTGGCTCGGTGATCTATTTTCAAGGTTGTGTAGCTAGGAAATGCCTCGTAAT

Function

symbol description
gda Predicted to enable guanine deaminase activity and zinc ion binding activity. Predicted to be involved in guanine metabolic process. Predicted to act upstream of or within guanine catabolic process. Predicted to be active in cytosol. Orthologous to human GDA (guanine deaminase).

NR:

description
guanine deaminase-like

GO:

id name namespace
GO:0006147 guanine catabolic process biological_process
GO:0008270 zinc ion binding molecular_function
GO:0008892 guanine deaminase activity molecular_function

KEGG:

id description
K01487 E3.5.4.3, guaD; guanine deaminase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803432.1 True 5111 mRNA 0.45 14 38263367 38303966

Neighbor

gene id symbol gene type direction distance location
c6h9orf85 csgr18h9orf85,clg9h9orf85,LOC105926787,LOC101078288,LOC103145608,LOC106963215,LOC102236857 coding upstream 5251 38248027 ~ 38258116 (+)
nkx3-1 NA coding upstream 185467 38075066 ~ 38077900 (+)
nkx2.7 NA coding upstream 209395 38050339 ~ 38053972 (+)
stc1 LOC103362328,LOC104965051 coding upstream 236320 38015375 ~ 38027047 (+)
ido1 LOC104931154 coding upstream 312668 37940919 ~ 37950699 (+)
trnaf-gaa_6 NA coding downstream 127626 38431592 ~ 38431664 (+)
LOC120560325 phyhip,LOC102233080,LOC104946538,LOC100707279 coding downstream 223774 38527740 ~ 38545362 (+)
si:dkey-31c13.1 NA coding downstream 275447 38579413 ~ 38586296 (+)
tcf7l1b tcf7l1,LOC107082304 coding downstream 408319 38712285 ~ 38801716 (+)
tgoln2 NA coding downstream 512763 38816729 ~ 38827785 (+)
G67739 NA non-coding upstream 18821 38244302 ~ 38244546 (+)
G67729 NA non-coding upstream 45004 38217808 ~ 38218363 (+)
G67721 NA non-coding upstream 58515 38203982 ~ 38204852 (+)
G67722 NA non-coding upstream 59533 38203037 ~ 38203834 (+)
G67723 NA non-coding upstream 76407 38185890 ~ 38186960 (+)
G67753 NA non-coding downstream 32183 38336149 ~ 38337038 (+)
G67758 NA non-coding downstream 73098 38377064 ~ 38384624 (+)
G67764 NA non-coding downstream 110272 38414238 ~ 38469587 (+)
G67765 NA non-coding downstream 113561 38417527 ~ 38431080 (+)
G67766 NA non-coding downstream 118395 38422361 ~ 38514016 (+)
LOC120560165 LOC104964460,LOC103362321 other upstream 534662 37717903 ~ 37728705 (+)
trpm3 trpm3,LOC103470491,LOC103145554,LOC106928040,LOC101476865,LOC100708457 other upstream 1770672 36241579 ~ 36492695 (+)
LOC120560081 NA other upstream 1782056 36477798 ~ 36481311 (+)
G67152 NA other upstream 2240103 35871423 ~ 36023264 (+)
G67145 NA other upstream 2409206 35841534 ~ 35854161 (+)
si:ch211-214j8.12 NA other downstream 5637 38309603 ~ 38323496 (+)
nkx6.3 nkx6-3,LOC102787307,LOC104940825,LOC102218504 other downstream 51637 38355603 ~ 38407523 (+)
G67824 NA other downstream 291845 38595811 ~ 38601821 (+)
G68023 NA other downstream 1106256 39410222 ~ 39461478 (+)
LOC120560010 sds other downstream 1558497 39862463 ~ 39878496 (+)

Expression


Co-expression Network