stc1 (LOC103362328,LOC104965051)


Basic Information

Item Value
gene id stc1
gene name LOC103362328,LOC104965051
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 38015375 ~ 38027047 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802148.1
AAAAGGAGTCCAGTGTAAAGACATTTGCTGGCAACTGACTTGTAACAGCCTACTGTGCGTTTCTTGTGTTTCTCGGCGCTGCAGAAGCTTGTCATTCTTTATGAATTACACCCAAAGCACGAGGCGTCTCTTTACATTTAGTTGTATTAGCTGTGTTGAGAGGACGATGCCTTTGAGGACCGGACTTTTTCTCCTGATGGTGCTGAACGCATCTGCAAATGAACTGGATCAAAACGAGTCTTATTCGCCCAGGAGAACACGCTTTTCTACCAACAGCCCTTCAGATGTGGCACGCTGTCTCAACAGTGCCCTCCAAGTTGGCTGCGGAGCCTTCGCCTGCCTGGAAAACTCAACTTGTGACACAGATGGCATGCATGACATCTGCAAATCCTTCCTTTACAGTGCTGCTAAATTTGACACTCAGggtaaagcatttgtgaaggAGAGCCTTAAGTGCATTGCCAATGGCATCACCACGAAGGCATTCCCCACCATTCGCCGCTGTTCCACCTTCCAAAGAATGATATCTGAAGTCCAAGAGGAGTGTTACAGCAAGCTGGATATCTGCACTGTTGCCCGATCGAATCCAGATGCTATTGGCGAAGTGGCACAGCTACCGAGTCACTTCCCCAATAGGTTTTATGGTAAGCTGCTACAGAGCCTGATGGACTGCGATGAGGACACAGTGGACCGCGTCAGGACCAGCATGGTGTCGCGGCTCGGCCCAGAGATGACCATGCTTATTCAGCTGCTGCAGAACAAGCCCTGCCCGTCCACTGCTGTGGCTGCAGCTGCCGCCATCCCGACTGGAGTGGAGGGCCGTGGGAGCTGGCGCTGGTCCATGGGTCCCCATATGTACAAGATCCAGCCTAATCTGCGAAACAGAGACTCTGCCAGCCATTTTGGCAAAAAGCGCTCTGCCAGTGACAGCTCCTAACTTCCACACAGATTCAGAAACTCCACAAAAAACCATCATGAAAGCTCCTCTGTTCCCTAGGGGTGGTAAAACTCCGCTAGActggaagtcacagaaacatgCACCTCTAGGGAATGCGGTGAGAGTAGATATCAGAGTTTGATTGTTGTTATGTTGTATATCCTACACTTTAGGCTTGAGAGAACCCCCCTTCCATCGAGTCCACTCACAGTTAGTGTCGAACATGTGGCTGTTGCATCTGTGCGACGAGGCGTTCCTGTTCACTCTTCTTCACCTCCTCCAACAGAGATGAAGCCTTGAGAAGTCGTTTGAAGCCAAGCATAAaacggaaagaaaaaaaaaacagccatacTGGTTAACGCCTCGAGAGCACAAGTCTGTacttttaaaaagacaaaaacacaatctCATAACCCCAACATTTGTTCATGAATAGAAACCAGTAGTCGGATTATTACTAGTTCACCGATAGGAATGGGAAATTATTGGTAGATGTAGTTAACATTTCAGCGATGAGACCTGTCAAATTGTGAGCATGAGATGTGGAAATGAGTTTCATATCTATTTCCTGACTAACATAACAGTTAAATTTACTGTACACTAAGTTATCTGAGACAGCCATAGCTCGCCCTCTAAAAGAGGTCCAAGGGGTTTCGTGATAACCTTTGAGAGGTTACCTTAAACTGACCAAAAAAACTTCAAACTGCCCTGAATGCTATTCATGAAATACCCAAATAGTGTATAGCTATAGAGCACTtattaggggtgtcacgattttcattttaaaatagagATTAGAGAGTTTTAGATTTCCACTATCGAAATCAGAAGCAGGAGCAGCGATTTCACCAGTAATTTGACTTGCGCAAGTgcgaataaaaaacaaaacagacacagtgtagcttaccggctggtagcttgcagctaaagacacagggcaacgttagcttaccggtagcctgcagctgctattttccagacaccatggccactgccggagataacagagaaaaaaaatcagaacCTGCTGTCCTGAAGTCACCGTGTGGAAACATTTTGTCTTCCCTGTGAGTGAGTTAGGGAAACAAACAACGAATGTAAAGCATGTGGGCTCCGACGGGACTTCCAACACAATCTCACTCCCAGCACGTCCAAAACTGTAGCTTAGTCAGGGGCCTTTGTCGTTTGTTACTGGAGCAAAAAGTCGACTTTAGTGTCTCAGTCAGACGCAGGGGGCTTTCAACTAATCAACTAActcaaaaaaaatgaaacccaACCCATCCGCGGCGATATTCAACGCTCTGGGTACCCATTTGGTGTCATTGTTCAGCATGCATGGTAAAAACACTTAGATACGGTTAGGGAAAGATCGTGGGTCAGATTACAAAATGCACGTTTaagtgacacgtgggacaagaacaggacacgaatcccggtctcctgggtgaaagtcctgtgttgtttgacacatccaccaccccaacttGCCTTCTTACGCTTTCAGTCCTTAATACCACTCCCTACCAATGTTGCTCTTGTCGTCATCTTACGGCGCgacggtcgagctgctgctctgcccggtgcgtcccgtacagacgctaaagggtgccttgtgcgtcggtatctgacgctgagaacCACTGACCAGGCATCATGGTTTGACGCTTGGTAAACTAAAAGGTGCTTTCAATTGCACTAATTTTGgaaaaactcaaactgttgttgtaaagtacccttctgccatctagtggttcaCGTATAGTCCTCTTTAAACGAACCAAACTCGGTCTAAAGTGGTTAAAAAAGTCGACCAACAGAAAAGAGACTCAGTCCTTTTTGCGTTCACATTGTCAGCTTACTTGAAAGAGGAGTCACTTCTCTTTCCGATGGGGCCTCAGGGCTAAAATACATACAGgacaaaaggcaaaacaaaCCTGAAACGTGTCGTGTTCACAATGCACAGGTCAAGAAAAACGCAATGCGGACTTGAAGCGAACCGTACTCAGACCACCTCCAGAAGAGGTCTGAGTACGGTTTGTTCCAGAGGGGTCTCAGTCCCTTTGGAGTGTTCACATATGTACATATCGATGAAAAACTAACCATTGGTTCCAAAAGGGGTCCAAGTCCCTTTGGAGTGTTAACATATACGCAAACAAAATGCTGACTAATGTCTTGAGTTCCTTTGAAGGGCTGAAACGGAccaagtgtaaaaaaaattgtggctTTTCCttcaatgttttaaattgaaaatcgaATTCAATCGTGACCTTAAAACGGAAAGTAAAATGGAATcatggatttggagaatcgtgacacccctaacTAGCACTTctacttgtttgttttctgatgGCAGATGTAGCCATGGTCGTGTGCTTTTAAACCATCATCCTGCACATAAGGATTGTCCAGGTCATGGCCAAGTCTAAaccatcagaaaaaaaaaaagtcaattttgcATATCTTGTATCCAGACACTTGTAATGCATACGACTGTTGAAGCTCTACGGTTTATGTGGGACCATGTTTAGTGGAATCTGTATCCTGTATCCGTTCTTATTAACTGAGCGTGAAGCAGTAGTGTATGTGCAGTAGCTGATTAGCACGTTCACCGGTGAGACTGAGAGGCAGCCATCTTCTTGGACTGATGATCGTCTTTCTCTGCGGTGAATAACGTGACATacacactggcttccagtgtcGAGATTGAGagtgactatttaaaaaaaaaaaaaatatgcctTGTTGTAATGATATTTATTTTCCTACAatattatttaatgttttttttttattttaaaattgcaTTATTGTAGTTTTAATTAGTTGATAGATTTTAAAAAGCAGTTCAGTCAGGGCTCCTATTTGAACCTATATGAGCTCtacgccaaaaaaaaaaaaaaaaaaaaaaaaaaagaagtgagcCGGCACTCTGGTGACTGAATGGGACCCGTGTCATGACTCTGTGCTGGCCATAGGGGAACAATGTTGGTCATTCACGCCCGGGGGATGTACTTTATGGGTGTTACAAGGGACCACAACAAAAACGATAGCTTCATTTTGACACACTTTCTGGTTGAAATAAAGGTTGTCATTGCAGCTGCTAGATGCGCTTGTTCAGTgctagg
>XM_039802149.1
AAAAGGAGTCCAGTGTAAAGACATTTGCTGGCAACTGACTTGTAACAGCCTACTGTGCGTTTCTTGTGTTTCTCGGCGCTGCAGAAGCTTGTCATTCTTTATGAATTACACCCAAAGCACGAGGCGTCTCTTTACATTTAGTTGTATTAGCTGTGTTGAGAGGACGATGCCTTTGAGGACCGGACTTTTTCTCCTGATGGTGCTGAACGCATCTGCAAATGAACTGGATCAAAACGAGTCTTATTCGCCCAGGAGAACACGCTTTTCTACCAACAGCCCTTATGTGGCACGCTGTCTCAACAGTGCCCTCCAAGTTGGCTGCGGAGCCTTCGCCTGCCTGGAAAACTCAACTTGTGACACAGATGGCATGCATGACATCTGCAAATCCTTCCTTTACAGTGCTGCTAAATTTGACACTCAGggtaaagcatttgtgaaggAGAGCCTTAAGTGCATTGCCAATGGCATCACCACGAAGGCATTCCCCACCATTCGCCGCTGTTCCACCTTCCAAAGAATGATATCTGAAGTCCAAGAGGAGTGTTACAGCAAGCTGGATATCTGCACTGTTGCCCGATCGAATCCAGATGCTATTGGCGAAGTGGCACAGCTACCGAGTCACTTCCCCAATAGGTTTTATGGTAAGCTGCTACAGAGCCTGATGGACTGCGATGAGGACACAGTGGACCGCGTCAGGACCAGCATGGTGTCGCGGCTCGGCCCAGAGATGACCATGCTTATTCAGCTGCTGCAGAACAAGCCCTGCCCGTCCACTGCTGTGGCTGCAGCTGCCGCCATCCCGACTGGAGTGGAGGGCCGTGGGAGCTGGCGCTGGTCCATGGGTCCCCATATGTACAAGATCCAGCCTAATCTGCGAAACAGAGACTCTGCCAGCCATTTTGGCAAAAAGCGCTCTGCCAGTGACAGCTCCTAACTTCCACACAGATTCAGAAACTCCACAAAAAACCATCATGAAAGCTCCTCTGTTCCCTAGGGGTGGTAAAACTCCGCTAGActggaagtcacagaaacatgCACCTCTAGGGAATGCGGTGAGAGTAGATATCAGAGTTTGATTGTTGTTATGTTGTATATCCTACACTTTAGGCTTGAGAGAACCCCCCTTCCATCGAGTCCACTCACAGTTAGTGTCGAACATGTGGCTGTTGCATCTGTGCGACGAGGCGTTCCTGTTCACTCTTCTTCACCTCCTCCAACAGAGATGAAGCCTTGAGAAGTCGTTTGAAGCCAAGCATAAaacggaaagaaaaaaaaaacagccatacTGGTTAACGCCTCGAGAGCACAAGTCTGTacttttaaaaagacaaaaacacaatctCATAACCCCAACATTTGTTCATGAATAGAAACCAGTAGTCGGATTATTACTAGTTCACCGATAGGAATGGGAAATTATTGGTAGATGTAGTTAACATTTCAGCGATGAGACCTGTCAAATTGTGAGCATGAGATGTGGAAATGAGTTTCATATCTATTTCCTGACTAACATAACAGTTAAATTTACTGTACACTAAGTTATCTGAGACAGCCATAGCTCGCCCTCTAAAAGAGGTCCAAGGGGTTTCGTGATAACCTTTGAGAGGTTACCTTAAACTGACCAAAAAAACTTCAAACTGCCCTGAATGCTATTCATGAAATACCCAAATAGTGTATAGCTATAGAGCACTtattaggggtgtcacgattttcattttaaaatagagATTAGAGAGTTTTAGATTTCCACTATCGAAATCAGAAGCAGGAGCAGCGATTTCACCAGTAATTTGACTTGCGCAAGTgcgaataaaaaacaaaacagacacagtgtagcttaccggctggtagcttgcagctaaagacacagggcaacgttagcttaccggtagcctgcagctgctattttccagacaccatggccactgccggagataacagagaaaaaaaatcagaacCTGCTGTCCTGAAGTCACCGTGTGGAAACATTTTGTCTTCCCTGTGAGTGAGTTAGGGAAACAAACAACGAATGTAAAGCATGTGGGCTCCGACGGGACTTCCAACACAATCTCACTCCCAGCACGTCCAAAACTGTAGCTTAGTCAGGGGCCTTTGTCGTTTGTTACTGGAGCAAAAAGTCGACTTTAGTGTCTCAGTCAGACGCAGGGGGCTTTCAACTAATCAACTAActcaaaaaaaatgaaacccaACCCATCCGCGGCGATATTCAACGCTCTGGGTACCCATTTGGTGTCATTGTTCAGCATGCATGGTAAAAACACTTAGATACGGTTAGGGAAAGATCGTGGGTCAGATTACAAAATGCACGTTTaagtgacacgtgggacaagaacaggacacgaatcccggtctcctgggtgaaagtcctgtgttgtttgacacatccaccaccccaacttGCCTTCTTACGCTTTCAGTCCTTAATACCACTCCCTACCAATGTTGCTCTTGTCGTCATCTTACGGCGCgacggtcgagctgctgctctgcccggtgcgtcccgtacagacgctaaagggtgccttgtgcgtcggtatctgacgctgagaacCACTGACCAGGCATCATGGTTTGACGCTTGGTAAACTAAAAGGTGCTTTCAATTGCACTAATTTTGgaaaaactcaaactgttgttgtaaagtacccttctgccatctagtggttcaCGTATAGTCCTCTTTAAACGAACCAAACTCGGTCTAAAGTGGTTAAAAAAGTCGACCAACAGAAAAGAGACTCAGTCCTTTTTGCGTTCACATTGTCAGCTTACTTGAAAGAGGAGTCACTTCTCTTTCCGATGGGGCCTCAGGGCTAAAATACATACAGgacaaaaggcaaaacaaaCCTGAAACGTGTCGTGTTCACAATGCACAGGTCAAGAAAAACGCAATGCGGACTTGAAGCGAACCGTACTCAGACCACCTCCAGAAGAGGTCTGAGTACGGTTTGTTCCAGAGGGGTCTCAGTCCCTTTGGAGTGTTCACATATGTACATATCGATGAAAAACTAACCATTGGTTCCAAAAGGGGTCCAAGTCCCTTTGGAGTGTTAACATATACGCAAACAAAATGCTGACTAATGTCTTGAGTTCCTTTGAAGGGCTGAAACGGAccaagtgtaaaaaaaattgtggctTTTCCttcaatgttttaaattgaaaatcgaATTCAATCGTGACCTTAAAACGGAAAGTAAAATGGAATcatggatttggagaatcgtgacacccctaacTAGCACTTctacttgtttgttttctgatgGCAGATGTAGCCATGGTCGTGTGCTTTTAAACCATCATCCTGCACATAAGGATTGTCCAGGTCATGGCCAAGTCTAAaccatcagaaaaaaaaaaagtcaattttgcATATCTTGTATCCAGACACTTGTAATGCATACGACTGTTGAAGCTCTACGGTTTATGTGGGACCATGTTTAGTGGAATCTGTATCCTGTATCCGTTCTTATTAACTGAGCGTGAAGCAGTAGTGTATGTGCAGTAGCTGATTAGCACGTTCACCGGTGAGACTGAGAGGCAGCCATCTTCTTGGACTGATGATCGTCTTTCTCTGCGGTGAATAACGTGACATacacactggcttccagtgtcGAGATTGAGagtgactatttaaaaaaaaaaaaaatatgcctTGTTGTAATGATATTTATTTTCCTACAatattatttaatgttttttttttattttaaaattgcaTTATTGTAGTTTTAATTAGTTGATAGATTTTAAAAAGCAGTTCAGTCAGGGCTCCTATTTGAACCTATATGAGCTCtacgccaaaaaaaaaaaaaaaaaaaaaaaaaaagaagtgagcCGGCACTCTGGTGACTGAATGGGACCCGTGTCATGACTCTGTGCTGGCCATAGGGGAACAATGTTGGTCATTCACGCCCGGGGGATGTACTTTATGGGTGTTACAAGGGACCACAACAAAAACGATAGCTTCATTTTGACACACTTTCTGGTTGAAATAAAGGTTGTCATTGCAGCTGCTAGATGCGCTTGTTCAGTgctagg

Function

NR:

description
PREDICTED: stanniocalcin-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802148.1 True 4065 mRNA 0.45 4 38015375 38027047
XM_039802149.1 False 4062 mRNA 0.45 4 38015375 38027047

Neighbor

gene id symbol gene type direction distance location
ido1 LOC104931154 coding upstream 64676 37940919 ~ 37950699 (+)
acsl2 LOC104964461,LOC103362322 coding upstream 253160 37729826 ~ 37762215 (+)
LOC120560164 LOC104964460,LOC103362321 coding upstream 297746 37708211 ~ 37717629 (+)
bmp1a NA coding upstream 363470 37585850 ~ 37651905 (+)
kansl3 kansl3,LOC102793526,LOC106579846 coding upstream 439918 37553378 ~ 37575457 (+)
nkx2.7 NA coding downstream 23292 38050339 ~ 38053972 (+)
nkx3-1 NA coding downstream 48019 38075066 ~ 38077900 (+)
c6h9orf85 csgr18h9orf85,clg9h9orf85,LOC105926787,LOC101078288,LOC103145608,LOC106963215,LOC102236857 coding downstream 220980 38248027 ~ 38258116 (+)
gda gda coding downstream 236320 38263367 ~ 38303966 (+)
trnaf-gaa_6 NA coding downstream 404545 38431592 ~ 38431664 (+)
G67697 NA non-coding upstream 576 38014592 ~ 38014799 (+)
G67686 NA non-coding upstream 25838 37989246 ~ 37989537 (+)
G67669 NA non-coding upstream 78516 37921724 ~ 37936859 (+)
G67666 NA non-coding upstream 101340 37913633 ~ 37914035 (+)
G67661 NA non-coding upstream 192006 37823071 ~ 37823369 (+)
G67712 NA non-coding downstream 85993 38113040 ~ 38144615 (+)
G67713 NA non-coding downstream 87864 38114911 ~ 38146223 (+)
G67718 LOC104966820 non-coding downstream 149825 38176872 ~ 38180835 (+)
G67723 NA non-coding downstream 158843 38185890 ~ 38186960 (+)
G67722 NA non-coding downstream 175990 38203037 ~ 38203834 (+)
LOC120560165 LOC104964460,LOC103362321 other upstream 286670 37717903 ~ 37728705 (+)
trpm3 trpm3,LOC103470491,LOC103145554,LOC106928040,LOC101476865,LOC100708457 other upstream 1522680 36241579 ~ 36492695 (+)
LOC120560081 NA other upstream 1534064 36477798 ~ 36481311 (+)
G67152 NA other upstream 1992111 35871423 ~ 36023264 (+)
G67145 NA other upstream 2161214 35841534 ~ 35854161 (+)
si:ch211-214j8.12 NA other downstream 282556 38309603 ~ 38323496 (+)
nkx6.3 nkx6-3,LOC102787307,LOC104940825,LOC102218504 other downstream 328556 38355603 ~ 38407523 (+)
G67824 NA other downstream 568764 38595811 ~ 38601821 (+)
G68023 NA other downstream 1383175 39410222 ~ 39461478 (+)
LOC120560010 sds other downstream 1835416 39862463 ~ 39878496 (+)

Expression


Co-expression Network