XLOC_005213 (FO704786.1)


Basic Information

Item Value
gene id XLOC_005213
gene name FO704786.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 10679026 ~ 10705916 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00010049
GTGTGTATAGCAGTGTCTGACATTCTGTCGCTGAggactgtgtgtgagtgtgttcacCCCGAGTAGCCCAATGACGCTGTAAATTTTTGCTCATCCAGGAACAGGAGTCCTCCAGCAGCATCCCGTAAGCAGGACAGAGGAGCAGTATGTCAACCCATCCCAGCAGCTGAGCTTCACTGTGGGATACGCAACTTAAATAGAGATTGAATATGTCCTCCACTCCGCTGGCCGAGGCAGAAGAGGATGTGTTTGATCTGACGGAGGCGGTTCCTGAGACCGAACGGCTTGACAGCAGCCTACAGAAAGCCAAAGCACAACTGTCAATCAAAACCAGGAGACATCGACCTTCCCGAACCCGCCTTAGGGACAGTGTGAGCTCCATAGATGGAGATGACGGCATTGACAGAATGAGCTATGGCTCTTCCCCGGTCCACCCATCTTTCCACTGTTCCTCCCCCTCCTCCGACCTGCTCCTGTCCTCCCCTTCCTCACGAAGAGACCGAGCTTTCACCTTTGACCCCTGCACTGTGGTTGGAGAACGGGAGGTGCAAGATGAAAAAAGGAGCTACAGACACCTCCTGAATACTTCCCAGGAGACCCTGCCTCTCAGCCCATTAAAATCCCCCTCCAGAGCCTGCGTCCATTCAGAGACATCATCCCCAGCTCATCTTTGCCAGACGGACCGCCTCAAGTCTCGTGAGGGAAGCCAACCTCTACTACACTATGGAGAATACTCACAGAGTGAAGATGAAAGTCACGATACAGGCCCAGATGATCCAGATAGTCCAACAGTGCTGCTGGACAAAAAAACAAGGAGACGGTTTCTTGATCTGGGGGTCACTTTACGTCGCACATATGGAAAGGTCAGAAAAGACAGATCCAACAGACTATCAGCAGGAAATCGGGATTCAGAAAGAACTGAGAACCGGTCCTCCCGTTCATCCGGCCCACCGTTTGTGCCTTTCTCTTGGTTCAGTGAGAGATTAAGGGGCTCTGGCTCCCCCAAGAACAATCAGTCCCCATCAAAGCCTTTCACACAGGGCTCTAGCACCGATGAGGACTTTGATTCTTCAGTGGGTTTACTGGAAGACTGCAGACCCTGCAAGACTGAGTCATCACAACCTTATCAGACCCTTCCTGAGCATTCAGATGGGaatGATTGTGACAGCATTCGTGGCACAGATTTCAGTTTTAAAAAGAAGGTGCTATCTGCCGCTGGTAAAGATAGGACAGAGAGACAGAATGGCGTCCATGGAAAACGGGACAGCGGGAAAAATGGACACAGTGAAGATGGACAAAAATTACTGACCTCTTGATGGCATTTCAGAAAGACTGAATACAATATGCTGCAGGTGCCATTATTACTGTCTAATGTTGCATTGGCTTTCACAATGTATTACTGatagatataataataaatataacttgcAAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000101171

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00010049 True 1432 mRNA 0.49 9 10679026 10705916

Neighbor

gene id symbol gene type direction distance location
XLOC_005212 med24 coding downstream 4420 10644074 ~ 10674606 (-)
XLOC_005211 myof coding downstream 111838 10517473 ~ 10567188 (-)
XLOC_005210 zgc:152977 coding downstream 166115 10478666 ~ 10512911 (-)
XLOC_005209 rac1a coding downstream 202578 10464897 ~ 10476448 (-)
XLOC_005208 uqcrc2b coding downstream 237365 10424676 ~ 10441661 (-)
XLOC_005214 NA coding upstream 63215 10769131 ~ 10772946 (-)
XLOC_005215 si:ch73-30l9.1 coding upstream 538998 11244914 ~ 11258404 (-)
XLOC_005216 get4 coding upstream 557038 11262954 ~ 11306766 (-)
XLOC_005217 zgc:174164 coding upstream 609933 11315849 ~ 11349899 (-)
XLOC_005218 htra1b coding upstream 682808 11388724 ~ 11457625 (-)
XLOC_005200 NA non-coding downstream 549124 10124660 ~ 10129902 (-)
XLOC_005199 BX928755.1 non-coding downstream 615358 10060636 ~ 10063668 (-)
XLOC_005196 AL732629.2 non-coding downstream 1007889 9669927 ~ 9671137 (-)
XLOC_005195 AL732629.1 non-coding downstream 1030681 9648228 ~ 9648345 (-)
XLOC_005187 CR457459.1 non-coding downstream 1333541 9345364 ~ 9345485 (-)
XLOC_005222 BX572641.1 non-coding upstream 1629300 12335216 ~ 12335331 (-)
XLOC_005224 NA non-coding upstream 2396950 13102866 ~ 13106223 (-)
XLOC_005237 NA non-coding upstream 3432370 14138286 ~ 14144159 (-)
XLOC_005240 NA non-coding upstream 4133871 14839787 ~ 14840559 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000161_02994719_03008186 SAMD14 coding CI01000161 null 2994719 ~ 3008281 (+)