trnav-aac_16


Basic Information

Item Value
gene id trnav-aac_16
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 2799356 ~ 2799428 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnav-aac_16
gtttctgtagtgtagtggttatcacGTTCGCCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGCAGAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnav-aac_16 True 73 tRNA 0.52 1 2799356 2799428

Neighbor

gene id symbol gene type direction distance location
trnav-aac_15 NA coding upstream 7963 2791321 ~ 2791393 (+)
trnav-aac_14 NA coding upstream 10558 2788726 ~ 2788798 (+)
trnav-aac_13 NA coding upstream 17590 2781694 ~ 2781766 (+)
trnav-cac_8 NA coding upstream 26967 2772317 ~ 2772389 (+)
trnav-cac_7 NA coding upstream 44417 2754867 ~ 2754939 (+)
trnav-aac_17 NA coding downstream 2719 2802147 ~ 2802219 (+)
tada2b tada2b,LOC107591039,LOC106599821,LOC107556062 coding downstream 11946 2811374 ~ 2819044 (+)
sorcs2 sorcs2,LOC107590992,LOC107656200,LOC106577493,LOC107556072 coding downstream 62372 2861800 ~ 3081489 (+)
LOC113523990 LOC108268232 coding downstream 287561 3086989 ~ 3097607 (+)
LOC113523977 LOC108268236,LOC108261094,LOC108268232,LOC108268231 coding downstream 289420 3088848 ~ 3092537 (+)
G58458 NA non-coding upstream 17016 2715633 ~ 2782340 (+)
G58465 NA non-coding upstream 71513 2682037 ~ 2727843 (+)
LOC117597104 NA non-coding upstream 179277 2611253 ~ 2620079 (+)
G58433 NA non-coding upstream 210863 2505730 ~ 2588493 (+)
G58403 NA non-coding upstream 488949 2308848 ~ 2310407 (+)
G58500 NA non-coding downstream 173144 2972572 ~ 2973113 (+)
G58503 NA non-coding downstream 261787 3061215 ~ 3062465 (+)
G58864 ptprn2 non-coding downstream 464275 3263703 ~ 3268331 (+)
G58999 NA non-coding downstream 737477 3536905 ~ 3538758 (+)
G59030 NA non-coding downstream 802135 3601563 ~ 3602067 (+)
trnav-cac_4 NA other upstream 83135 2716149 ~ 2716221 (+)
trnav-aac_11 NA other upstream 83806 2715478 ~ 2715550 (+)
trnav-aac_10 NA other upstream 93065 2706219 ~ 2706291 (+)
trnav-aac_9 NA other upstream 104268 2695016 ~ 2695088 (+)
trnav-cac_3 NA other upstream 106887 2692397 ~ 2692469 (+)
grpel1 grpel1,LOC107739410,LOC107653296,LOC107590998 other downstream 21883 2821311 ~ 2834509 (+)
wdr97 LOC108268253 other downstream 811664 3611092 ~ 3630110 (+)
LOC113525491 NA other downstream 840402 3639830 ~ 3648060 (+)
LOC113547237 LOC108261305,LOC108268217,LOC108261462,LOC108268211,LOC108261092 other downstream 929028 3728456 ~ 3736323 (+)
LOC113545588 LOC108261092,LOC108261462,LOC108261482,LOC108268206,LOC108268211,LOC108261305,LOC108268217 other downstream 939873 3739301 ~ 4061514 (+)

Expression


Co-expression Network