hsd3b7 (hsd3b7)


Basic Information

Item Value
gene id hsd3b7
gene name hsd3b7
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 812026 ~ 849880 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034309744.1
tgaaaataaaaatgagaggaAGCAGAATGTTTGTGCAGAAGCGAGACAGAAATTGAGAAGAGCGTCGTCTGGTTCATGAgAAGCACAGCAGCACGCGCTCAGAGGAACACTGAAACCTCCTCGCGCTCCAAGAGAACCTCGTCTCCAGCGGCTCCACGCAGGAAGAAACCATGAGCAGCACGAACCCCGGGCTGGTTTACCTTATGACAGGAGGATGTGGATTTCTGGGGCAGCACCTGCTGAACGTTCTGCTGGAGAAAGAGCAGAATGTGAAGGAGATCCGGCTCTTCGATAAGAACATCGACTCCAGCCTGGAGGACCTCAGCACAGGGACAGAAAACGTGATTAATGCGTGTAAGGAGCTCGGGATTCAGCACCTGCTCTACACCAGCAGTATGGAGGTGATCGGACCCAACGTGAGGGGAGACGCCTTCATCAGGGGAAACGAGGACACGCCGTATAACGTGTGTCACGAAATGCCATATCCCAAGAGTAAAGCTGAGGCAGAGAAACTGGTGCTGGAAGCCAATGGCACCAAgGTTGCAGGCGGTGCGTCTCTGTACACGTGTGCGCTGCGTCCCACAGGGATTTACGGTGAAAACCACCAGCTGATGAAGGATTTCTACATGATGGGTGTTCGCACGGGCGGCTGGCTCATTAAAGGAGTTCCGCGAGACACCGAGCACGGACGTGTTTACGCAGGAAACGTAGCGTGGATGCACACGCTGGCAGCGCAGGCTTTACGCGAGCATCCCGAGCGACTCGGGGGTGAAGCGTACTTCTGCTACGACGATTCTCCCTACAAGAGCTACGAGGAATTCAACATGCAGTTCCTGTCTGCGTTTAACTTCCGCTCGCTGCGCATGCCGCTCTGTGTGCTCTGGATGCTGGCGTGCTTAAACGAGCTGCTGCACTGGCTGCTGAAGCCCGTGCGCGACTTCACGCCGCTGCTGAACCGCTACACGCTGGCCGTCGCCACCACCTCCTTCACCGTGCGCACGGACAAGGCGCTGCGCCACTTCAACTACCGCCCGCTGTACGACTGGCAGCAGTGCCAAGCTCGCACGCAGAAGTGGGTGGACACGTTCCCTCTGAAAACCAGAGGCAAGGACGCATGAGGACGGGGAACATCAGGAGACACGAAGACAGACtgagatcatcatcatcatcatcattctatacatacacacacataatacacagtGGACACAAATGCCAGGGACTAATGAAACAGGAAGGGAGTAGTGTCTTAGTGTCTTAGTGTCTTAGAGTCTTAGAGTCTTAGTGTCTTAGTGTCTTAGTGTCTTAGTGTCTTCGTTCTGTTTCCCGtttataatattaacaatataattATCTTCCTCCTTCCAAAGGATTTGTAATTGTGTGGACACGCCCATTTTTAATCATCAGGAACATAaacagtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggtgtgtgtgtgaggggggtgTCAAGATTTTTAAGAGAATCACTGGACTAATcagtcattattatttaaaaacgaATCAAACTCTTTCAGACAGGTTTATTACTCTAACCAGGTGGATGTTTTAACCGTGACGCACTGCTGCTTAGTGCgtttatttaatcataaaatcCACAGTCTACACGTTATCCTTATATTCCATAGCCAGAGACACGTGAGGCCAAAGAAACATACAGAAAGAGGATGGAGAGGACGTTAAAGTCGTGGACTTGTGAAGGAAGTTAGTTTTGACCCGTTTGTCTGTAAAAGACGTGTTGCAGTACGTTTTCCCACAGTGTTGtcgagttctggattctgattggtcagaaggtgctgagcgttgtcctataacagcgtgcTGCGTTAGGTTTTATTCCgtacttaataataaaaaaaaatgggcagACACATTCCCCTGAGCAACACCtaaatctaaagaaaaaaaaatgtcaccagGGCAAAGCTATTTTTGTAAACtgaatttattactattttattttttattgctaaTATAGAGAAGCCTCTCAGAGTGACTCGTTATTAACAGGTGATTTTAGAGAATTCAGATGTTTCGATTTACACTCCAAGCATCATTTTACTTTTGCTAATGTTTCTTTGACCTACTCACGTGTTAGCATTAATCCGTGTGTTTATAATAGACATTAACCCTATAGGTTCTGTATCTGAGACGGCATTTACACTTTTCACATATTTAACACAAGAAAGACAAAAACTCTTCCtacctctttctctccatctgccTAATTAAATCACTTCACTTCTAATAATTTGAtttgaaattcttcttttttttgtcatttgtttgacgtggcaaaaaaaaatgctcaagatagtttaaatcattaaaaatatatatat
>XM_034309745.1
AGCCTTCAACAGAACCAAGCACAGCAGCACGCGCTCAGAGGAACACTGAAACCTCCTCGCGCTCCAAGAGAACCTCGTCTCCAGCGGCTCCACGCAGGAAGAAACCATGAGCAGCACGAACCCCGGGCTGGTTTACCTTATGACAGGAGGATGTGGATTTCTGGGGCAGCACCTGCTGAACGTTCTGCTGGAGAAAGAGCAGAATGTGAAGGAGATCCGGCTCTTCGATAAGAACATCGACTCCAGCCTGGAGGACCTCAGCACAGGGACAGAAAACGTGATTAATGCGTGTAAGGAGCTCGGGATTCAGCACCTGCTCTACACCAGCAGTATGGAGGTGATCGGACCCAACGTGAGGGGAGACGCCTTCATCAGGGGAAACGAGGACACGCCGTATAACGTGTGTCACGAAATGCCATATCCCAAGAGTAAAGCTGAGGCAGAGAAACTGGTGCTGGAAGCCAATGGCACCAAgGTTGCAGGCGGTGCGTCTCTGTACACGTGTGCGCTGCGTCCCACAGGGATTTACGGTGAAAACCACCAGCTGATGAAGGATTTCTACATGATGGGTGTTCGCACGGGCGGCTGGCTCATTAAAGGAGTTCCGCGAGACACCGAGCACGGACGTGTTTACGCAGGAAACGTAGCGTGGATGCACACGCTGGCAGCGCAGGCTTTACGCGAGCATCCCGAGCGACTCGGGGGTGAAGCGTACTTCTGCTACGACGATTCTCCCTACAAGAGCTACGAGGAATTCAACATGCAGTTCCTGTCTGCGTTTAACTTCCGCTCGCTGCGCATGCCGCTCTGTGTGCTCTGGATGCTGGCGTGCTTAAACGAGCTGCTGCACTGGCTGCTGAAGCCCGTGCGCGACTTCACGCCGCTGCTGAACCGCTACACGCTGGCCGTCGCCACCACCTCCTTCACCGTGCGCACGGACAAGGCGCTGCGCCACTTCAACTACCGCCCGCTGTACGACTGGCAGCAGTGCCAAGCTCGCACGCAGAAGTGGGTGGACACGTTCCCTCTGAAAACCAGAGGCAAGGACGCATGAGGACGGGGAACATCAGGAGACACGAAGACAGACtgagatcatcatcatcatcatcattctatacatacacacacataatacacagtGGACACAAATGCCAGGGACTAATGAAACAGGAAGGGAGTAGTGTCTTAGTGTCTTAGTGTCTTAGAGTCTTAGAGTCTTAGTGTCTTAGTGTCTTAGTGTCTTAGTGTCTTCGTTCTGTTTCCCGtttataatattaacaatataattATCTTCCTCCTTCCAAAGGATTTGTAATTGTGTGGACACGCCCATTTTTAATCATCAGGAACATAaacagtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggtgtgtgtgtgaggggggtgTCAAGATTTTTAAGAGAATCACTGGACTAATcagtcattattatttaaaaacgaATCAAACTCTTTCAGACAGGTTTATTACTCTAACCAGGTGGATGTTTTAACCGTGACGCACTGCTGCTTAGTGCgtttatttaatcataaaatcCACAGTCTACACGTTATCCTTATATTCCATAGCCAGAGACACGTGAGGCCAAAGAAACATACAGAAAGAGGATGGAGAGGACGTTAAAGTCGTGGACTTGTGAAGGAAGTTAGTTTTGACCCGTTTGTCTGTAAAAGACGTGTTGCAGTACGTTTTCCCACAGTGTTGtcgagttctggattctgattggtcagaaggtgctgagcgttgtcctataacagcgtgcTGCGTTAGGTTTTATTCCgtacttaataataaaaaaaaatgggcagACACATTCCCCTGAGCAACACCtaaatctaaagaaaaaaaaatgtcaccagGGCAAAGCTATTTTTGTAAACtgaatttattactattttattttttattgctaaTATAGAGAAGCCTCTCAGAGTGACTCGTTATTAACAGGTGATTTTAGAGAATTCAGATGTTTCGATTTACACTCCAAGCATCATTTTACTTTTGCTAATGTTTCTTTGACCTACTCACGTGTTAGCATTAATCCGTGTGTTTATAATAGACATTAACCCTATAGGTTCTGTATCTGAGACGGCATTTACACTTTTCACATATTTAACACAAGAAAGACAAAAACTCTTCCtacctctttctctccatctgccTAATTAAATCACTTCACTTCTAATAATTTGAtttgaaattcttcttttttttgtcatttgtttgacgtggcaaaaaaaaatgctcaagatagtttaaatcattaaaaatatatatat
>XM_034309746.1
cgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctcagtgttcGGTTATCTCACTAATCCGAGCTTCATGCTCTCCAGAAGCACAGCAGCACGCGCTCAGAGGAACACTGAAACCTCCTCGCGCTCCAAGAGAACCTCGTCTCCAGCGGCTCCACGCAGGAAGAAACCATGAGCAGCACGAACCCCGGGCTGGTTTACCTTATGACAGGAGGATGTGGATTTCTGGGGCAGCACCTGCTGAACGTTCTGCTGGAGAAAGAGCAGAATGTGAAGGAGATCCGGCTCTTCGATAAGAACATCGACTCCAGCCTGGAGGACCTCAGCACAGgtGAGGTGGTGGTCACTCAGGGTGATATTGCAGTTTACAGTGATGTTTTGGAGGCGTGCCGTGGAGCTGATCTGGTCATTCACTCAGCCAGTCTGGTGGATGTGTGGTATAAATTTCCGGAGAAAACCATCCACACCGTCAACGTAGGAGGGACAGAAAACGTGATTAATGCGTGTAAGGAGCTCGGGATTCAGCACCTGCTCTACACCAGCAGTATGGAGGTGATCGGACCCAACGTGAGGGGAGACGCCTTCATCAGGGGAAACGAGGACACGCCGTATAACGTGTGTCACGAAATGCCATATCCCAAGAGTAAAGCTGAGGCAGAGAAACTGGTGCTGGAAGCCAATGGCACCAAgGTTGCAGGCGGTGCGTCTCTGTACACGTGTGCGCTGCGTCCCACAGGGATTTACGGTGAAAACCACCAGCTGATGAAGGATTTCTACATGATGGGTGTTCGCACGGGCGGCTGGCTCATTAAAGGAGTTCCGCGAGACACCGAGCACGGACGTGTTTACGCAGGAAACGTAGCGTGGATGCACACGCTGGCAGCGCAGGCTTTACGCGAGCATCCCGAGCGACTCGGGGGTGAAGCGTACTTCTGCTACGACGATTCTCCCTACAAGAGCTACGAGGAATTCAACATGCAGTTCCTGTCTGCGTTTAACTTCCGCTCGCTGCGCATGCCGCTCTGTGTGCTCTGGATGCTGGCGTGCTTAAACGAGCTGCTGCACTGGCTGCTGAAGCCCGTGCGCGACTTCACGCCGCTGCTGAACCGCTACACGCTGGCCGTCGCCACCACCTCCTTCACCGTGCGCACGGACAAGGCGCTGCGCCACTTCAACTACCGCCCGCTGTACGACTGGCAGCAGTGCCAAGCTCGCACGCAGAAGTGGGTGGACACGTTCCCTCTGAAAACCAGAGGCAAGGACGCATGAGGACGGGGAACATCAGGAGACACGAAGACAGACtgagatcatcatcatcatcatcattctatacatacacacacataatacacagtGGACACAAATGCCAGGGACTAATGAAACAGGAAGGGAGTAGTGTCTTAGTGTCTTAGTGTCTTAGAGTCTTAGAGTCTTAGTGTCTTAGTGTCTTAGTGTCTTAGTGTCTTCGTTCTGTTTCCCGtttataatattaacaatataattATCTTCCTCCTTCCAAAGGATTTGTAATTGTGTGGACACGCCCATTTTTAATCATCAGGAACATAaacagtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggtgtgtgtgtgaggggggtgTCAAGATTTTTAAGAGAATCACTGGACTAATcagtcattattatttaaaaacgaATCAAACTCTTTCAGACAGGTTTATTACTCTAACCAGGTGGATGTTTTAACCGTGACGCACTGCTGCTTAGTGCgtttatttaatcataaaatcCACAGTCTACACGTTATCCTTATATTCCATAGCCAGAGACACGTGAGGCCAAAGAAACATACAGAAAGAGGATGGAGAGGACGTTAAAGTCGTGGACTTGTGAAGGAAGTTAGTTTTGACCCGTTTGTCTGTAAAAGACGTGTTGCAGTACGTTTTCCCACAGTGTTGtcgagttctggattctgattggtcagaaggtgctgagcgttgtcctataacagcgtgcTGCGTTAGGTTTTATTCCgtacttaataataaaaaaaaatgggcagACACATTCCCCTGAGCAACACCtaaatctaaagaaaaaaaaatgtcaccagGGCAAAGCTATTTTTGTAAACtgaatttattactattttattttttattgctaaTATAGAGAAGCCTCTCAGAGTGACTCGTTATTAACAGGTGATTTTAGAGAATTCAGATGTTTCGATTTACACTCCAAGCATCATTTTACTTTTGCTAATGTTTCTTTGACCTACTCACGTGTTAGCATTAATCCGTGTGTTTATAATAGACATTAACCCTATAGGTTCTGTATCTGAGACGGCATTTACACTTTTCACATATTTAACACAAGAAAGACAAAAACTCTTCCtacctctttctctccatctgccTAATTAAATCACTTCACTTCTAATAATTTGAtttgaaattcttcttttttttgtcatttgtttgacgtggcaaaaaaaaatgctcaagatagtttaaatcattaaaaatatatatat

Function

symbol description
hsd3b7 Predicted to enable oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor. Predicted to act upstream of or within steroid biosynthetic process. Is expressed in several structures, including adenohypophysis; digestive system; lens; macrophage; and solid lens vesicle. Human ortholog(s) of this gene implicated in congenital bile acid synthesis defect 1 and intrahepatic cholestasis. Orthologous to human HSD3B7 (hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7).

NR:

description
3 beta-hydroxysteroid dehydrogenase type 7-like

GO:

id name namespace
GO:0006694 steroid biosynthetic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0016853 isomerase activity molecular_function
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor molecular_function
GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity molecular_function

KEGG:

id description
K12408 HSD3B7; cholest-5-ene-3beta,7alpha-diol 3beta-dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034309744.1 False 2379 mRNA 0.46 6 812026 849880
XM_034309745.1 False 2315 mRNA 0.46 6 818661 849880
XM_034309746.1 True 2529 mRNA 0.47 6 823974 849880

Neighbor

gene id symbol gene type direction distance location
kat8 kat8,LOC107658503,LOC107554120,LOC107582998 coding upstream 85741 717617 ~ 726285 (+)
si:dkey-16l2.16 si:dkey-16l2.16,LOC108280555,LOC108427354,LOC107729502,LOC107554119,LOC107658507 coding upstream 106573 690189 ~ 705453 (+)
srrm2 LOC108280305,LOC107583001,LOC107689653,LOC107729482,LOC107730748 coding upstream 145679 653037 ~ 666347 (+)
bcl2l12 NA coding upstream 225570 573394 ~ 586456 (+)
LOC113524995 NA coding upstream 248617 555289 ~ 563409 (+)
LOC113527857 itpripl2 coding downstream 15333 865213 ~ 882642 (+)
syt17 syt17,LOC107729446,LOC107658452,LOC107732856,LOC107564007 coding downstream 39381 889261 ~ 911910 (+)
smg1 smg1,LOC107729485 coding downstream 91140 941020 ~ 997685 (+)
arl6ip1 arl6ip1,LOC107658451,LOC107674170,LOC107732869 coding downstream 150209 1000089 ~ 1014745 (+)
elob tceb2,LOC108280902,LOC107564001,LOC103036770,LOC108427344,LOC105012960 coding downstream 172046 1021926 ~ 1034215 (+)
G203339 NA non-coding upstream 68286 741832 ~ 743740 (+)
G203321 NA non-coding upstream 73299 738339 ~ 738727 (+)
G203328 NA non-coding upstream 125396 679778 ~ 686630 (+)
G203303 NA non-coding upstream 180444 631290 ~ 631582 (+)
G203296 NA non-coding upstream 187406 623115 ~ 624620 (+)
G203327 NA non-coding downstream 208799 1058679 ~ 1060521 (+)
LOC117598762 NA non-coding downstream 211310 1061190 ~ 1078426 (+)
G203385 NA non-coding downstream 260649 1110529 ~ 1110847 (+)
G203635 LOC108280870,LOC103034911 non-coding downstream 459517 1309397 ~ 1312989 (+)
G203647 NA non-coding downstream 512503 1362383 ~ 1441015 (+)
setd1a setd1a,LOC107737760,LOC107554121,LOC107729457 other upstream 5681 778840 ~ 806345 (+)
fus fus,LOC107658502,LOC107729526 other upstream 37776 753067 ~ 774250 (+)
si:dkey-16l2.17 LOC108280473 other upstream 79136 726729 ~ 732890 (+)
thoc6 thoc6,LOC107580143,LOC108280484,LOC107730738,LOC107689651,LOC106600718 other upstream 88334 666808 ~ 723692 (+)
rnf25 rnf25 other upstream 95007 707738 ~ 717019 (+)
armc5 armc5 other downstream 184456 1034336 ~ 1056334 (+)
paqr4a paqr4,LOC101165805,LOC105897660,LOC104930707,LOC108280840,LOC107658445,LOC106606885,LOC102784286 other downstream 370614 1220494 ~ 1237202 (+)
kmt5c LOC108280634 other downstream 503449 1353329 ~ 1361460 (+)
syt3 syt3,LOC107551154,LOC107563990,LOC107680842 other downstream 711644 1561524 ~ 1619974 (+)
ccndx LOC108280826 other downstream 1033172 1883052 ~ 1889515 (+)

Expression


Co-expression Network