Gene
RNA
| Item | Value |
|---|---|
| gene id | G186699 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 23476115 ~ 23476497 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU220984 | True | 383 | lncRNA | 0.33 | 1 | 23476115 | 23476497 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC113526144 | LOC108270555 | coding | upstream | 2546 | 23413029 ~ 23473569 (+) |
| kif14 | kif14 | coding | upstream | 66001 | 23389070 ~ 23410114 (+) |
| ddx59 | ddx59,LOC107717990,LOC107593348 | coding | upstream | 88439 | 23378681 ~ 23387676 (+) |
| LOC117598438 | NA | coding | upstream | 305204 | 23169883 ~ 23170911 (+) |
| fam43a | fam43a,LOC106573864 | coding | upstream | 340963 | 23132967 ~ 23135152 (+) |
| dennd1b | dennd1b | coding | downstream | 359206 | 23835703 ~ 23926144 (+) |
| trnaq-uug_2 | NA | coding | downstream | 456369 | 23932866 ~ 23932937 (+) |
| trnaq-cug_11 | NA | coding | downstream | 457635 | 23934132 ~ 23934203 (+) |
| trnaq-uug_3 | NA | coding | downstream | 458138 | 23934635 ~ 23934706 (+) |
| trnaq-uug_4 | NA | coding | downstream | 460520 | 23937017 ~ 23937088 (+) |
| G186643 | NA | non-coding | upstream | 56522 | 23405504 ~ 23419593 (+) |
| G186538 | NA | non-coding | upstream | 123879 | 23335346 ~ 23352236 (+) |
| G186435 | NA | non-coding | upstream | 356338 | 23118760 ~ 23119777 (+) |
| G186331 | NA | non-coding | upstream | 470086 | 23003569 ~ 23006029 (+) |
| G186304 | col6a2 | non-coding | upstream | 517729 | 22956296 ~ 22958386 (+) |
| G186798 | NA | non-coding | downstream | 192521 | 23669018 ~ 23676568 (+) |
| G186814 | NA | non-coding | downstream | 235536 | 23712033 ~ 23714371 (+) |
| G186864 | NA | non-coding | downstream | 315423 | 23791920 ~ 23792127 (+) |
| G186868 | NA | non-coding | downstream | 319233 | 23795730 ~ 23800962 (+) |
| G186882 | NA | non-coding | downstream | 350179 | 23826676 ~ 23827902 (+) |
| pcdh17 | pcdh17,LOC107687749,LOC107572292,LOC107718221,LOC107739552 | other | upstream | 1095095 | 22312442 ~ 22381020 (+) |
| trnap-agg_1 | NA | other | upstream | 1517156 | 21958888 ~ 21958959 (+) |
| si:dkey-28e7.3 | LOC108270845,LOC108438669,LOC107718874,LOC107753848,LOC107674537,LOC107680538 | other | upstream | 2211060 | 21252145 ~ 21265055 (+) |
| wipf2a | LOC108270800 | other | upstream | 2265576 | 21189248 ~ 21210539 (+) |
| G184979 | NA | other | upstream | 3325221 | 20149971 ~ 20150894 (+) |
| glrx2 | glrx2 | other | downstream | 731379 | 24207876 ~ 24210763 (+) |
| oaz1a | oaz1 | other | downstream | 1086903 | 24563400 ~ 24568643 (+) |
| LOC113523924 | nell1 | other | downstream | 2055248 | 25531745 ~ 25696872 (+) |
| polr2l | polr2l | other | downstream | 2709365 | 26185862 ~ 26212115 (+) |
| G188164 | NA | other | downstream | 2730445 | 26206942 ~ 26210010 (+) |
