pfkfb1 (pfkfb1,LOC108276267,LOC108425577,LOC107574688,LOC107673088)


Basic Information

Item Value
gene id pfkfb1
gene name pfkfb1,LOC108276267,LOC108425577,LOC107574688,LOC107673088
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047610.1
NCBI id CM018556.1
chromosome length 25111544
location 19283497 ~ 19294201 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026920194.2
TCAGGTGACCTCAGAAGGAGCAGAACTCACAGGAGACTGCTTTGTGTATaagtgtgagagtgtgactTGGTCACTTTAGGCTCAGACGAAGAACTAGGCAGTTAAATGTTACATGACATGTcgacagaacagacagaactCATGCAGACCCCATTGCTGAAAATCTGGGTGCCTGGGGCTGGAGGCTCACTGAGCCAAAGGAGAGGCTCGTCACGACCCCAGTTTACAAACTCTCCAACCATGATTGTAATGGTGGGGCTGCCTGCCAGAGGAAAGACTTATATCTCCAGGAAGCTTACACGCTACCTCAACTGGATTGGAGTCCCAACTCAAGTCTTTAATTTGGGCCAGTATAGAAGAGAAGCAGTCAAGAGTTACAAAAACTATGAATTCTTCCATCCAGATAATGAAGAGGCCATGAAGATCCGCAGGGCTTGTGTTTTAAAGGCCCTCAAGGACATTGCCAACTACTTCACTAAGGAGCAGGGACAAGTAGCAGTATTTGATGCCACTAACACGacaaaggagaggagaggaatcATCACCAGCTTTGCCAAGGAGAAGGGCTACAAGgtgtTTTTTATTGAGTCAATTTGTGATGACCCAGAAATTATTGAGGCAAATATAATGGAGGTGAAACTGAGTAGCCCGGACTACGAGAACTGCGACAAAGACAAGGTGGTGGAGGATTTTCTGAAGCGCATTGAATGCTACAAGATGACTTACATTCCCCTTGATGATGAAAACGACAGGAATATGTCCTACATTAAGATCTTCAACGTGGGCACCAGATATCTGGTGAACAGGGTTCAGGACCATATCCAGAGCCGTATAGTGTACTACCTCATGAACATCCACGTCACACCACGCTCCATCTACCTCAGCAGGCATGGGGAGAGcgagctgaacctgctgggccgcATCGGAGGAGACTCTGGCCTTTCTTCACAAGGCAAAAGGTATGCTAGGGCTCTGTCCGAGTTCATCAGAAATCAGGACATAAAGGACCTAAAGGTGTGGACGAGTCACTTTAAAAGGACCATACAGACAGCTGAGGCTCTGGGAGTCACTTATGAGCAGTGGAAAGCCCTGAATGAGATCGATGCTGGCGTGTGTGAGGAGATGACTTATGAAGAGATCCAGGAGAACTATCCGGAGGAGTTTGCGATGAGAGACCAAGACAAGTATCGGTACAGATATCCCAAAGGAGAGTCTTACGAAGACCTGGTGCATCGTCTAGAGCCGGTCATCATGGAGCTGGAGAGACAGGAGAATGTGCTGGTTATCTGCCACCAGGCAGTCATGCGTTGTCTGCTGGCCTATTTTCTGGACAAAAGCGCAGAGGAACTTCCATACCTTAAATGTCCCCTCCATACTGTACTCAAACTAACACCAGTGGCCTACGGATGCAAAGTGGAATCTATTTACCTAAACATCCAAGCagtcaacacacacagaggaaaaccTGCGAACGTGGATGTGACAAGAAAGCCAGAAGAAGCACTTCGCACTGTTCCAGAACATTTCTAACACAGCTTATACAACACTTAGCTCCAGACAAGCGGCATTCCAAAAGTGGTCATACTCAGTATAACAGCtctggtacatttcactgtttgaatcattccgcttgtctgtgttcactacattaAACAATATACACTAAATTCCAATTCAAAGAATAATTCATTACATCAAAACCATCGAAATATGACACTTACTACAggctgtctgtcagtctgtgcaTTGCATTGCAACACACAGCACTCTATCCAACTGTGGCTTCTTTAAGAACTATTTTCGCTGAcggaggaaaaataaacaaaatatttggcgataa
>XM_026920195.2
AGCAGTCAAGAGTTACAAAAACTATGAATTCTTCCATCCAGATAATGAAGAGGCCATGAAGATCCGCAGGGCTTGTGTTTTAAAGGCCCTCAAGGACATTGCCAACTACTTCACTAAGGAGCAGGGACAAGTAGCAGTATTTGATGCCACTAACACGacaaaggagaggagaggaatcATCACCAGCTTTGCCAAGGAGAAGGGCTACAAGGCAGgtgtTTTTTATTGAGTCAATTTGTGATGACCCAGAAATTATTGAGGCAAATATAATGGAGGTGAAACTGAGTAGCCCGGACTACGAGAACTGCGACAAAGACAAGGTGGTGGAGGATTTTCTGAAGCGCATTGAATGCTACAAGATGACTTACATTCCCCTTGATGATGAAAACGACAGGAATATGTCCTACATTAAGATCTTCAACGTGGGCACCAGATATCTGGTGAACAGGGTTCAGGACCATATCCAGAGCCGTATAGTGTACTACCTCATGAACATCCACGTCACACCACGCTCCATCTACCTCAGCAGGCATGGGGAGAGcgagctgaacctgctgggccgcATCGGAGGAGACTCTGGCCTTTCTTCACAAGGCAAAAGGTATGCTAGGGCTCTGTCCGAGTTCATCAGAAATCAGGACATAAAGGACCTAAAGGTGTGGACGAGTCACTTTAAAAGGACCATACAGACAGCTGAGGCTCTGGGAGTCACTTATGAGCAGTGGAAAGCCCTGAATGAGATCGATGCTGGCGTGTGTGAGGAGATGACTTATGAAGAGATCCAGGAGAACTATCCGGAGGAGTTTGCGATGAGAGACCAAGACAAGTATCGGTACAGATATCCCAAAGGAGAGTCTTACGAAGACCTGGTGCATCGTCTAGAGCCGGTCATCATGGAGCTGGAGAGACAGGAGAATGTGCTGGTTATCTGCCACCAGGCAGTCATGCGTTGTCTGCTGGCCTATTTTCTGGACAAAAGCGCAGAGGAACTTCCATACCTTAAATGTCCCCTCCATACTGTACTCAAACTAACACCAGTGGCCTACGGATGCAAAGTGGAATCTATTTACCTAAACATCCAAGCagtcaacacacacagaggaaaaccTGCGAACGTGGATGTGACAAGAAAGCCAGAAGAAGCACTTCGCACTGTTCCAGAACATTTCTAACACAGCTTATACAACACTTAGCTCCAGACAAGCGGCATTCCAAAAGTGGTCATACTCAGTATAACAGCtctggtacatttcactgtttgaatcattccgcttgtctgtgttcactacattaAACAATATACACTAAATTCCAATTCAAAGAATAATTCATTACATCAAAACCATCGAAATATGACACTTACTACAggctgtctgtcagtctgtgcaTTGCATTGCAACACACAGCACTCTATCCAACTGTGGCTTCTTTAAGAACTATTTTCGCTGAcggaggaaaaataaacaaaatatttggcgataa
>XM_026920197.2
AGCAGTCAAGAGTTACAAAAACTATGAATTCTTCCATCCAGATAATGAAGAGGCCATGAAGATCCGCAGGGCTTGTGTTTTAAAGGCCCTCAAGGACATTGCCAACTACTTCACTAAGGAGCAGGGACAAGTAGCAGTGAGTATTTGATGCCACTAACACGacaaaggagaggagaggaatcATCACCAGCTTTGCCAAGGAGAAGGGCTACAAGGCAGgtgtTTTTTATTGAGTCAATTTGTGATGACCCAGAAATTATTGAGGCAAATATAATGGAGGTGAAACTGAGTAGCCCGGACTACGAGAACTGCGACAAAGACAAGGTGGTGGAGGATTTTCTGAAGCGCATTGAATGCTACAAGATGACTTACATTCCCCTTGATGATGAAAACGACAGGAATATGTCCTACATTAAGATCTTCAACGTGGGCACCAGATATCTGGTGAACAGGGTTCAGGACCATATCCAGAGCCGTATAGTGTACTACCTCATGAACATCCACGTCACACCACGCTCCATCTACCTCAGCAGGCATGGGGAGAGcgagctgaacctgctgggccgcATCGGAGGAGACTCTGGCCTTTCTTCACAAGGCAAAAGGTATGCTAGGGCTCTGTCCGAGTTCATCAGAAATCAGGACATAAAGGACCTAAAGGTGTGGACGAGTCACTTTAAAAGGACCATACAGACAGCTGAGGCTCTGGGAGTCACTTATGAGCAGTGGAAAGCCCTGAATGAGATCGATGCTGGCGTGTGTGAGGAGATGACTTATGAAGAGATCCAGGAGAACTATCCGGAGGAGTTTGCGATGAGAGACCAAGACAAGTATCGGTACAGATATCCCAAAGGAGAGTCTTACGAAGACCTGGTGCATCGTCTAGAGCCGGTCATCATGGAGCTGGAGAGACAGGAGAATGTGCTGGTTATCTGCCACCAGGCAGTCATGCGTTGTCTGCTGGCCTATTTTCTGGACAAAAGCGCAGAGGAACTTCCATACCTTAAATGTCCCCTCCATACTGTACTCAAACTAACACCAGTGGCCTACGGATGCAAAGTGGAATCTATTTACCTAAACATCCAAGCagtcaacacacacagaggaaaaccTGCGAACGTGGATGTGACAAGAAAGCCAGAAGAAGCACTTCGCACTGTTCCAGAACATTTCTAACACAGCTTATACAACACTTAGCTCCAGACAAGCGGCATTCCAAAAGTGGTCATACTCAGTATAACAGCtctggtacatttcactgtttgaatcattccgcttgtctgtgttcactacattaAACAATATACACTAAATTCCAATTCAAAGAATAATTCATTACATCAAAACCATCGAAATATGACACTTACTACAggctgtctgtcagtctgtgcaTTGCATTGCAACACACAGCACTCTATCCAACTGTGGCTTCTTTAAGAACTATTTTCGCTGAcggaggaaaaataaacaaaatatttggcgataa
>XM_034311657.1
TCAGGTGACCTCAGAAGGAGCAGAACTCACAGGAGACTGCTTTGTGTATaagtgtgagagtgtgactTGGTCACTTTAGGCTCAGACGAAGAACTAGGCAGTTAAATGTTACATGACATGTcgacagaacagacagaactCATGCAGACCCCATTGCTGAAAATCTGGGTGCCTGGGGCTGGAGGCTCACTGAGCCAAAGGAGAGGCTCGTCACGACCCCAGTTTACAAACTCTCCAACCATGATTGTAATGGTGGGGCTGCCTGCCAGAGGAAAGACTTATATCTCCAGGAAGCTTACACGCTACCTCAACTGGATTGGAGTCCCAACTCAAGTCTTTAATTTGGGCCAGTATAGAAGAGAAGCAGTCAAGAGTTACAAAAACTATGAATTCTTCCATCCAGATAATGAAGAGGCCATGAAGATCCGCAGGGCTTGTGTTTTAAAGGCCCTCAAGGACATTGCCAACTACTTCACTAAGGAGCAGGGACAAGTAGCAGTATTTGATGCCACTAACACGacaaaggagaggagaggaatcATCACCAGCTTTGCCAAGGAGAAGGGCTACAAGGAGGTGAAACTGAGTAGCCCGGACTACGAGAACTGCGACAAAGACAAGGTGGTGGAGGATTTTCTGAAGCGCATTGAATGCTACAAGATGACTTACATTCCCCTTGATGATGAAAACGACAGGAATATGTCCTACATTAAGATCTTCAACGTGGGCACCAGATATCTGGTGAACAGGGTTCAGGACCATATCCAGAGCCGTATAGTGTACTACCTCATGAACATCCACGTCACACCACGCTCCATCTACCTCAGCAGGCATGGGGAGAGcgagctgaacctgctgggccgcATCGGAGGAGACTCTGGCCTTTCTTCACAAGGCAAAAGGTATGCTAGGGCTCTGTCCGAGTTCATCAGAAATCAGGACATAAAGGACCTAAAGGTGTGGACGAGTCACTTTAAAAGGACCATACAGACAGCTGAGGCTCTGGGAGTCACTTATGAGCAGTGGAAAGCCCTGAATGAGATCGATGCTGGCGTGTGTGAGGAGATGACTTATGAAGAGATCCAGGAGAACTATCCGGAGGAGTTTGCGATGAGAGACCAAGACAAGTATCGGTACAGATATCCCAAAGGAGAGTCTTACGAAGACCTGGTGCATCGTCTAGAGCCGGTCATCATGGAGCTGGAGAGACAGGAGAATGTGCTGGTTATCTGCCACCAGGCAGTCATGCGTTGTCTGCTGGCCTATTTTCTGGACAAAAGCGCAGAGGAACTTCCATACCTTAAATGTCCCCTCCATACTGTACTCAAACTAACACCAGTGGCCTACGGATGCAAAGTGGAATCTATTTACCTAAACATCCAAGCagtcaacacacacagaggaaaaccTGCGAACGTGGATGTGACAAGAAAGCCAGAAGAAGCACTTCGCACTGTTCCAGAACATTTCTAACACAGCTTATACAACACTTAGCTCCAGACAAGCGGCATTCCAAAAGTGGTCATACTCAGTATAACAGCtctggtacatttcactgtttgaatcattccgcttgtctgtgttcactacattaAACAATATACACTAAATTCCAATTCAAAGAATAATTCATTACATCAAAACCATCGAAATATGACACTTACTACAggctgtctgtcagtctgtgcaTTGCATTGCAACACACAGCACTCTATCCAACTGTGGCTTCTTTAAGAACTATTTTCGCTGAcggaggaaaaataaacaaaatatttggcgataa
>XM_034311658.1
TCAGGTGACCTCAGAAGGAGCAGAACTCACAGGAGACTGCTTTGTGTATaagtgtgagagtgtgactTGGTCACTTTAGGCTCAGACGAAGAACTAGGCAGTTAAATGTTACATGACATGTcgacagaacagacagaactCATGCAGACCCCATTGCTGAAAATCTGGGTGCCTGGGGCTGGAGGCTCACTGAGCCAAAGGAGAGGCTGAAAAGTGTACTGTTGTTCTCATTGTGGTATTCACTATTCTGCAGCGTCACGACCCCAGTTTACAAACTCTCCAACCATGATTGTAATGGTGGGGCTGCCTGCCAGAGGAAAGACTTATATCTCCAGGAAGCTTACACGCTACCTCAACTGGATTGGAGTCCCAACTCAAGTCTTTAATTTGGGCCAGTATAGAAGAGAAGCAGTCAAGAGTTACAAAAACTATGAATTCTTCCATCCAGATAATGAAGAGGCCATGAAGATCCGCAGGGCTTGTGTTTTAAAGGCCCTCAAGGACATTGCCAACTACTTCACTAAGGAGCAGGGACAAGTAGCAGTATTTGATGCCACTAACACGacaaaggagaggagaggaatcATCACCAGCTTTGCCAAGGAGAAGGGCTACAAGgtgtTTTTTATTGAGTCAATTTGTGATGACCCAGAAATTATTGAGGCAAATATAATGGAGGTGAAACTGAGTAGCCCGGACTACGAGAACTGCGACAAAGACAAGGTGGTGGAGGATTTTCTGAAGCGCATTGAATGCTACAAGATGACTTACATTCCCCTTGATGATGAAAACGACAGGAATATGTCCTACATTAAGATCTTCAACGTGGGCACCAGATATCTGGTGAACAGGGTTCAGGACCATATCCAGAGCCGTATAGTGTACTACCTCATGAACATCCACGTCACACCACGCTCCATCTACCTCAGCAGGCATGGGGAGAGcgagctgaacctgctgggccgcATCGGAGGAGACTCTGGCCTTTCTTCACAAGGCAAAAGGTATGCTAGGGCTCTGTCCGAGTTCATCAGAAATCAGGACATAAAGGACCTAAAGGTGTGGACGAGTCACTTTAAAAGGACCATACAGACAGCTGAGGCTCTGGGAGTCACTTATGAGCAGTGGAAAGCCCTGAATGAGATCGATGCTGGCGTGTGTGAGGAGATGACTTATGAAGAGATCCAGGAGAACTATCCGGAGGAGTTTGCGATGAGAGACCAAGACAAGTATCGGTACAGATATCCCAAAGGAGAGTCTTACGAAGACCTGGTGCATCGTCTAGAGCCGGTCATCATGGAGCTGGAGAGACAGGAGAATGTGCTGGTTATCTGCCACCAGGCAGTCATGCGTTGTCTGCTGGCCTATTTTCTGGACAAAAGCGCAGAGGAACTTCCATACCTTAAATGTCCCCTCCATACTGTACTCAAACTAACACCAGTGGCCTACGGATGCAAAGTGGAATCTATTTACCTAAACATCCAAGCagtcaacacacacagaggaaaaccTGCGAACGTGGATGTGACAAGAAAGCCAGAAGAAGCACTTCGCACTGTTCCAGAACATTTCTAACACAGCTTATACAACACTTAGCTCCAGACAAGCGGCATTCCAAAAGTGGTCATACTCAGTATAACAGCtctggtacatttcactgtttgaatcattccgcttgtctgtgttcactacattaAACAATATACACTAAATTCCAATTCAAAGAATAATTCATTACATCAAAACCATCGAAATATGACACTTACTACAggctgtctgtcagtctgtgcaTTGCATTGCAACACACAGCACTCTATCCAACTGTGGCTTCTTTAAGAACTATTTTCGCTGAcggaggaaaaataaacaaaatatttggcgataa

Function

symbol description
pfkfb1 Predicted to enable 6-phosphofructo-2-kinase activity and fructose-2,6-bisphosphate 2-phosphatase activity. Predicted to be involved in fructose 2,6-bisphosphate metabolic process. Predicted to act upstream of or within fructose metabolic process and phosphorylation. Predicted to be part of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase complex. Predicted to be active in cytosol. Is expressed in neural plate; neural tube; and somite. Orthologous to human PFKFB1 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1).

NR:

description
PREDICTED: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase-like isoform X2

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0006000 fructose metabolic process biological_process
GO:0006003 fructose 2,6-bisphosphate metabolic process biological_process
GO:0003873 6-phosphofructo-2-kinase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0004331 fructose-2,6-bisphosphate 2-phosphatase activity molecular_function

KEGG:

id description
K19028 PFKFB1; 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026920194.2 False 1840 mRNA 0.46 14 19283497 19294201
XM_026920195.2 False 1482 mRNA 0.45 12 19286212 19294201
XM_026920197.2 False 1486 mRNA 0.45 12 19286212 19294201
XM_034311657.1 False 1783 mRNA 0.46 13 19283497 19294201
XM_034311658.1 True 1885 mRNA 0.46 14 19283497 19294201

Neighbor

gene id symbol gene type direction distance location
si:dkey-78k11.9 NA coding upstream 7744 19273287 ~ 19275753 (+)
ccn5 wisp2 coding upstream 12275 19263417 ~ 19271222 (+)
ttpal ttpal,LOC107716173,LOC107695756,LOC107673079,LOC107564663,LOC107568409 coding upstream 88639 19190772 ~ 19194858 (+)
hnf4a hnf4a,LOC107673078,LOC107737506,LOC107568408 coding upstream 95538 19167301 ~ 19187959 (+)
r3hdml r3hdml coding upstream 118236 19161213 ~ 19165261 (+)
itih6 itih6 coding downstream 1318 19295519 ~ 19309834 (+)
atp6ap1b LOC108275744 coding downstream 28598 19322799 ~ 19331974 (+)
ptpn22 NA coding downstream 145235 19439436 ~ 19465336 (+)
zgc:158263 LOC108276042,LOC108441406 coding downstream 490370 19784571 ~ 19794997 (+)
zbtb48 zbtb48,LOC102780700 coding downstream 545510 19839711 ~ 19848662 (+)
G257242 NA non-coding upstream 31700 19251445 ~ 19251797 (+)
G257234 NA non-coding upstream 37790 19243185 ~ 19245707 (+)
G257232 NA non-coding upstream 41929 19241112 ~ 19241568 (+)
G257235 NA non-coding upstream 48236 19233003 ~ 19235261 (+)
G257199 NA non-coding upstream 164964 19117877 ~ 19118533 (+)
LOC113530341 NA non-coding downstream 52110 19346311 ~ 19350848 (+)
G257256 NA non-coding downstream 60526 19354727 ~ 19359740 (+)
G257255 NA non-coding downstream 63310 19357511 ~ 19361051 (+)
G257283 NA non-coding downstream 99336 19393537 ~ 19393903 (+)
G257287 NA non-coding downstream 109295 19403496 ~ 19405521 (+)
pkig NA other upstream 60938 19198426 ~ 19222559 (+)
fmnl3 LOC108276057,LOC108425567,LOC107716159 other upstream 349178 18879481 ~ 18934319 (+)
LOC113530386 slc26a9 other upstream 2095120 17175701 ~ 17188377 (+)
itga5 itga5,LOC107599342,LOC107723722 other upstream 2158546 17071136 ~ 17124951 (+)
G256046 NA other upstream 2775117 16508025 ~ 16508380 (+)
G257622 LOC108276210 other downstream 184101 19478302 ~ 19478895 (+)
si:ch73-206d17.1 LOC108275771 other downstream 331328 19625529 ~ 19705063 (+)
G258096 hoxc6,hoxc6a,LOC107593966,LOC108433405,LOC107664205,LOC107714999,LOC103034651 other downstream 1096608 20390809 ~ 20398714 (+)
LOC113530729 hnrnpa1,LOC108275985,LOC108275986,LOC107707002,LOC107714994 other downstream 1216043 20510244 ~ 20514195 (+)
ubxn10 ubxn10,LOC108275535,LOC108433381,LOC107385551,LOC107699345 other downstream 1608904 20903105 ~ 20907459 (+)

Expression


Co-expression Network