Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026920195.2 |
| length | 1482 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 12 |
| gene id | pfkfb1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 19283497 ~ 19294201 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0016310 | phosphorylation | biological_process |
| GO:0006000 | fructose metabolic process | biological_process |
| GO:0006003 | fructose 2,6-bisphosphate metabolic process | biological_process |
| GO:0003873 | 6-phosphofructo-2-kinase activity | molecular_function |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004331 | fructose-2,6-bisphosphate 2-phosphatase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU304485 | lncRNA | upstream | 34415 | 19251445 ~ 19251797 (+) | True | G257242 |
| TU304477 | lncRNA | upstream | 40505 | 19243185 ~ 19245707 (+) | True | G257234 |
| TU304475 | lncRNA | upstream | 44644 | 19241112 ~ 19241568 (+) | True | G257232 |
| TU304478 | lncRNA | upstream | 50951 | 19233003 ~ 19235261 (+) | True | G257235 |
| TU304470 | lncRNA | upstream | 63707 | 19203336 ~ 19222505 (+) | True | pkig |
| XR_003403138.2 | lncRNA | downstream | 52110 | 19346311 ~ 19350848 (+) | True | LOC113530341 |
| TU304502 | lncRNA | downstream | 60526 | 19354727 ~ 19359740 (+) | True | G257256 |
| TU304499 | lncRNA | downstream | 63310 | 19357511 ~ 19361051 (+) | True | G257255 |
| TU304530 | lncRNA | downstream | 99336 | 19393537 ~ 19393903 (+) | True | G257283 |
| TU304535 | lncRNA | downstream | 109295 | 19403496 ~ 19405521 (+) | True | G257287 |
| XM_034311665.1 | mRNA | upstream | 10459 | 19273287 ~ 19275753 (+) | True | si:dkey-78k11.9 |
| XM_026920219.2 | mRNA | upstream | 10459 | 19273287 ~ 19275753 (+) | False | si:dkey-78k11.9 |
| XM_026920209.2 | mRNA | upstream | 14990 | 19263417 ~ 19271222 (+) | True | ccn5 |
| XM_034311674.1 | mRNA | upstream | 63653 | 19198454 ~ 19222559 (+) | False | pkig |
| XM_034311673.1 | mRNA | upstream | 64325 | 19198426 ~ 19221887 (+) | False | pkig |
| XM_026920185.2 | mRNA | downstream | 1318 | 19295519 ~ 19309834 (+) | True | itih6 |
| XM_026920186.2 | mRNA | downstream | 7525 | 19301726 ~ 19309830 (+) | False | itih6 |
| XM_034311659.1 | mRNA | downstream | 28598 | 19322799 ~ 19331974 (+) | True | atp6ap1b |
| XM_034311885.1 | mRNA | downstream | 145235 | 19439436 ~ 19465336 (+) | True | ptpn22 |
| XM_026920204.2 | mRNA | downstream | 331328 | 19625529 ~ 19633180 (+) | False | si:ch73-206d17.1 |
| trnae-cuc_34 | other | upstream | 253224 | 19032917 ~ 19032988 (+) | True | trnae-cuc_34 |
| TU304341 | other | upstream | 374498 | 18879568 ~ 18911714 (+) | False | fmnl3 |
| XR_004579712.1 | other | upstream | 2165271 | 17071136 ~ 17120941 (+) | False | itga5 |
| TU303060 | other | upstream | 2777832 | 16508025 ~ 16508380 (+) | True | G256046 |
| TU302910 | other | upstream | 2890000 | 16373242 ~ 16396212 (+) | False | LOC113530371 |
| TU304946 | other | downstream | 184101 | 19478302 ~ 19478895 (+) | True | G257622 |
| TU305571 | other | downstream | 1096608 | 20390809 ~ 20398714 (+) | True | G258096 |
| XR_003403172.2 | other | downstream | 1216043 | 20510244 ~ 20514195 (+) | False | LOC113530729 |
| XR_004579743.1 | other | downstream | 1608904 | 20903105 ~ 20907250 (+) | False | ubxn10 |
| TU305940 | other | downstream | 1608946 | 20903147 ~ 20905073 (+) | False | ubxn10 |
